Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_K06
(444 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204; Euka... 107 1e-22
UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4; Bilateria|... 103 2e-21
UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56; Euk... 93 3e-18
UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3; Eukary... 91 7e-18
UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2; Ost... 91 1e-17
UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3; Eukary... 55 6e-07
UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1; ... 55 6e-07
UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole ge... 53 2e-06
UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1; Enceph... 44 0.001
UniRef50_P53143 Cluster: Putative uncharacterized protein YGL102... 44 0.001
UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiel... 40 0.018
UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1; ... 40 0.024
UniRef50_Q9ZQM0 Cluster: Putative non-LTR retroelement reverse t... 34 1.2
UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9; Euryar... 33 2.1
UniRef50_A4ANL3 Cluster: Putative lipoprotein; n=1; Flavobacteri... 32 4.8
UniRef50_A7RPS0 Cluster: Predicted protein; n=1; Nematostella ve... 32 6.4
UniRef50_Q4DQR7 Cluster: Putative uncharacterized protein; n=1; ... 31 8.5
>UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204;
Eukaryota|Rep: 60S ribosomal protein L27a - Homo sapiens
(Human)
Length = 148
Score = 107 bits (257), Expect = 1e-22
Identities = 48/108 (44%), Positives = 67/108 (62%)
Frame = +1
Query: 76 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLXKLWTLXSEQTXLKYASA 255
NAGG HHHRIN DKYHPGYFGK+GM+++H +N++FCP +NL KLWTL SEQT + A
Sbjct: 34 NAGGLHHHRINFDKYHPGYFGKVGMKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKN 93
Query: 256 PDGXVPAHQYCQSWILQVARQRQTPQTTCHSKSKVLLKISXEENQRCG 399
G P +S +V + + P+ K+K + + E+ + G
Sbjct: 94 KTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVG 141
Score = 37.9 bits (84), Expect = 0.097
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +2
Query: 269 SPLINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXINDVGGACVLSA 421
+P+I++V++ PKQPVIV I VGGACVL A
Sbjct: 98 APIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 148
>UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4;
Bilateria|Rep: Ribosomal protein L27a - Ascaris suum
(Pig roundworm) (Ascaris lumbricoides)
Length = 133
Score = 103 bits (247), Expect = 2e-21
Identities = 42/62 (67%), Positives = 48/62 (77%)
Frame = +1
Query: 76 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLXKLWTLXSEQTXLKYASA 255
NAGG+HHHRIN DKYHPGYFGK+GMRNFH KN +CP +NL KLW+L SE+T YA
Sbjct: 20 NAGGQHHHRINFDKYHPGYFGKVGMRNFHVRKNGLYCPTVNLDKLWSLVSEKTRTTYAEK 79
Query: 256 PD 261
D
Sbjct: 80 KD 81
Score = 39.5 bits (88), Expect = 0.032
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = +2
Query: 269 SPLINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXINDVGGACVLSA 421
+P+I++VKA PKQPVIV I VGGAC+L A
Sbjct: 83 APVIDVVKAGYFKVLGKGLLPKQPVIVKAKFFSRTAEQKIKGVGGACILVA 133
>UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56;
Eukaryota|Rep: 60S ribosomal protein L27a-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 146
Score = 92.7 bits (220), Expect = 3e-18
Identities = 48/109 (44%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Frame = +1
Query: 76 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLXKLWTLXSEQTXLKYASA 255
NAGG HHHRI DKYHPGYFGK+GMR FH +NK FCP++NL KLW+L E +K S+
Sbjct: 34 NAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFFCPIVNLDKLWSLVPED--VKAKSS 91
Query: 256 PDGXVPAHQYCQSWILQVARQRQTPQTTCH-SKSKVLLKISXEENQRCG 399
D VP Q +V + P+ K+K++ K + ++ + G
Sbjct: 92 KDN-VPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEAG 139
>UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3;
Eukaryota|Rep: 60S ribosomal protein L27a - Tetrahymena
thermophila
Length = 149
Score = 91.5 bits (217), Expect = 7e-18
Identities = 44/97 (45%), Positives = 57/97 (58%)
Frame = +1
Query: 79 AGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLXKLWTLXSEQTXLKYASAP 258
AGG HHHRI M+K+HPGY+GKLGMR FH KN CPV+N+ KLW+L S+ T KYA
Sbjct: 37 AGGMHHHRILMEKWHPGYYGKLGMRTFHLKKNPLHCPVVNIDKLWSLVSDATRQKYAE-D 95
Query: 259 DGXVPAHQYCQSWILQVARQRQTPQTTCHSKSKVLLK 369
VP ++ +V + + P K+K K
Sbjct: 96 KKKVPVIDVTKAGFFKVLGKGRLPNQPVVVKAKYFSK 132
Score = 35.1 bits (77), Expect = 0.69
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +2
Query: 272 PLINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXINDVGGACVLSA 421
P+I++ KA P QPV+V I VGGACVL+A
Sbjct: 100 PVIDVTKAGFFKVLGKGRLPNQPVVVKAKYFSKTAERRIVAVGGACVLTA 149
>UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2;
Ostreococcus|Rep: 60s ribosomal protein L15/L27 -
Ostreococcus tauri
Length = 198
Score = 91.1 bits (216), Expect = 1e-17
Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Frame = +1
Query: 79 AGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLXKLWTLXSEQTXLKYASAP 258
AGG+HHHRI MDKYHPGYFGK+GMR+FH KN+ CP +N+ KLWTL + + A
Sbjct: 86 AGGQHHHRIMMDKYHPGYFGKVGMRHFHKLKNQTVCPTINIDKLWTLVGTEKREECAK-N 144
Query: 259 DGXVPAHQYCQSWILQVARQRQTPQTTCHSKSKVLLKISXEENQRCGW-CLCT 414
P I ++ + Q P K + + K++ ++ + G C+ T
Sbjct: 145 TSQAPVIDLTDHGIFKLLGKGQLPNQPVVVKCRYISKLAEKKIKEVGGACILT 197
Score = 31.5 bits (68), Expect = 8.5
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 269 SPLINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXINDVGGACVLSA 421
+P+I++ P QPV+V I +VGGAC+L+A
Sbjct: 148 APVIDLTDHGIFKLLGKGQLPNQPVVVKCRYISKLAEKKIKEVGGACILTA 198
>UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3;
Eukaryota|Rep: 60S ribosomal protein L27A - Guillardia
theta (Cryptomonas phi)
Length = 144
Score = 55.2 bits (127), Expect = 6e-07
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = +1
Query: 76 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLXKL 210
N+GG+HHH+I +KYH +FGK GMR + K NF +NL K+
Sbjct: 34 NSGGQHHHKIFFEKYHKKHFGKTGMRYYRKLKQNNFNKSINLDKI 78
>UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 187
Score = 55.2 bits (127), Expect = 6e-07
Identities = 30/105 (28%), Positives = 52/105 (49%)
Frame = +1
Query: 85 GEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLXKLWTLXSEQTXLKYASAPDG 264
G ++ + YFGK+GMR+FH +N +F PV+NL KLWTL + K +A
Sbjct: 77 GSQEMEVDREIGRDSYFGKVGMRHFHLTRNSSFRPVVNLDKLWTLVPAEQR-KGLTADST 135
Query: 265 XVPAHQYCQSWILQVARQRQTPQTTCHSKSKVLLKISXEENQRCG 399
VP + +V + + P C K++ + ++ ++ + G
Sbjct: 136 EVPVIDTLAAGYGKVLGKGRLPALPCIVKARWVSSLAEKKIKEAG 180
Score = 40.3 bits (90), Expect = 0.018
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +1
Query: 79 AGGEHHHRINMDKYHP 126
AGG+HHHR NMDKYHP
Sbjct: 35 AGGQHHHRTNMDKYHP 50
>UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole
genome shotgun sequence; n=3; Vitis vinifera|Rep:
Chromosome chr12 scaffold_159, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 151
Score = 53.2 bits (122), Expect = 2e-06
Identities = 19/36 (52%), Positives = 29/36 (80%)
Frame = +1
Query: 112 DKYHPGYFGKLGMRNFHFXKNKNFCPVLNLXKLWTL 219
DK+HPG FGK+GMR+FH + K CP++++ KLW++
Sbjct: 28 DKHHPGNFGKVGMRHFHKLRIKLHCPIVHIDKLWSM 63
>UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L27a
- Encephalitozoon cuniculi
Length = 147
Score = 44.4 bits (100), Expect = 0.001
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 79 AGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLXKLWTLXSEQTXLKYASAP 258
AGG H + ++HP Y GK GMR +H +N ++ ++ +LW + ++ + P
Sbjct: 35 AGGFSHMKTFFTRFHPDYHGKRGMRVYHRKENSDYARPISSARLWGMIPKEQRYDFLDNP 94
Query: 259 D 261
+
Sbjct: 95 E 95
>UniRef50_P53143 Cluster: Putative uncharacterized protein YGL102C;
n=2; Saccharomycetaceae|Rep: Putative uncharacterized
protein YGL102C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 142
Score = 44.0 bits (99), Expect = 0.001
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = -1
Query: 246 ILQXRLFRX*CPKLX*VQNWTEILVLXKVEISHTKFAKVSRMVLVHVDXXXXXXXXXXXX 67
+L +F CP+ VQ+W + L VE+SHT +++ MV +HV+
Sbjct: 63 VLVSLVFWDQCPQFVQVQDWLPEMSLLLVEVSHTNLTEITWMVFIHVNSVVMLTTGHTST 122
Query: 66 XXXXXVLSDTTMS 28
VL+DTT +
Sbjct: 123 TGVLSVLTDTTFT 135
>UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 40.3 bits (90), Expect = 0.018
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 79 AGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKN 180
+GG+HHH+I ++Y YF K GMR ++ K N
Sbjct: 35 SGGQHHHKIIFERYRETYFRKTGMRIYNLEKTLN 68
>UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1;
n=1; Arabidopsis thaliana|Rep: Putative 60S ribosomal
protein L27a-1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 104
Score = 39.9 bits (89), Expect = 0.024
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 94 HHRINMDKYHPGYFGK--LGMRNFHFXKNKNFCPVLNLXKLWTL 219
H R + PG G +GMR FH +NK +C ++NL KLW++
Sbjct: 19 HGRFGKHRKLPGSRGNAGVGMRYFHKLRNKFYCQIVNLDKLWSM 62
>UniRef50_Q9ZQM0 Cluster: Putative non-LTR retroelement reverse
transcriptase; n=1; Arabidopsis thaliana|Rep: Putative
non-LTR retroelement reverse transcriptase - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1044
Score = 34.3 bits (75), Expect = 1.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 111 GQVPSWILWQTWYEKFPLXKEQEFLSSFEL 200
GQ+P WILW W + L EQ+ +SS +L
Sbjct: 842 GQLPIWILWNLWNCRNKLIFEQKHISSMDL 871
>UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L15P -
Methanococcus maripaludis
Length = 143
Score = 33.5 bits (73), Expect = 2.1
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +1
Query: 76 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLXKLWTLXSEQTXLKYASA 255
NAG + H +++ K++P YFGK G N+N C + L + E+ LKY A
Sbjct: 36 NAGHQKHKWLSVCKFNPDYFGKYGF-------NRNPCLIKQLETINIGELEEYILKYKDA 88
>UniRef50_A4ANL3 Cluster: Putative lipoprotein; n=1;
Flavobacteriales bacterium HTCC2170|Rep: Putative
lipoprotein - Flavobacteriales bacterium HTCC2170
Length = 535
Score = 32.3 bits (70), Expect = 4.8
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -1
Query: 411 TQAPPTSLIFFXADFEKNFAFTMTGCLGSLPL 316
T A SL FF D + N A T GCLG+ P+
Sbjct: 306 TDAEGNSLYFFSLDTKDNSACTSAGCLGAWPV 337
>UniRef50_A7RPS0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 306
Score = 31.9 bits (69), Expect = 6.4
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -3
Query: 184 RNSCSX*SGNFSYQVCQSIQDGTCPC*FCDGAHHQHYHDLLDAYGA 47
R+SC + F +C+S T PC D H +H DL+D GA
Sbjct: 108 RSSCQ--ARCFMNNLCRSYNYNTTPCQLSDSDHLEHPSDLVDKPGA 151
>UniRef50_Q4DQR7 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 200
Score = 31.5 bits (68), Expect = 8.5
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +1
Query: 226 EQTXLKYASAPDGXVPAHQYCQSWILQVARQRQTPQTTCHSKSKVLLKISXEENQRCGWC 405
E+ ++ + P G V + CQ + + RQ + Q T + S V I ENQR G C
Sbjct: 83 EKRLSRHKTWPMGAVSTCRECQ--VAKQKRQEECSQWTSPATSDVRRLIRATENQRHGCC 140
Query: 406 LCTICVN 426
CV+
Sbjct: 141 GACPCVH 147
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,887,925
Number of Sequences: 1657284
Number of extensions: 6362727
Number of successful extensions: 15370
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 14874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15363
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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