Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_K06
         (444 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   3.7  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   6.4  
AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related ...    23   6.4  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    22   8.5  

>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.4 bits (48), Expect = 3.7
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 340 CHSKSKVLLKISXEENQRCGWCLCTIC 420
           C S S + ++ S   NQR GW   T+C
Sbjct: 388 CLSDSSIFVQ-SPNCNQRYGWHPATVC 413


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 79  AGGEHHHRINMDKYHPGYFG 138
           A   HHH  +   +HPG  G
Sbjct: 153 AAAMHHHHHHPHHHHPGLTG 172


>AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related 2
          protein protein.
          Length = 257

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 92 CSPPALPRPPGCLRCFPI 39
          C+PP +P  P C    P+
Sbjct: 38 CNPPGIPGGPACAGLKPM 55


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 271 PAHQYCQSWILQVARQRQTPQTTCHSKSK 357
           PAH+  Q W  Q   Q+Q  +   H + K
Sbjct: 268 PAHRQHQQWPHQQNGQQQQQRMGIHQQEK 296


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 396,189
Number of Sequences: 2352
Number of extensions: 6558
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37418568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)