Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_K06
         (444 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a pr...   107   2e-23
BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for IM...   107   2e-23
BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a ...   107   2e-23
AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A ...   107   2e-23
AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a ...   103   4e-22
BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a ...   102   6e-22
AB007178-1|BAA25837.1|   34|Homo sapiens ribosomal protein L27a ...    31   1.4  
AY358091-1|AAQ88458.1|  126|Homo sapiens VFLL3057 protein.             29   9.6  

>U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  107 bits (257), Expect = 2e-23
 Identities = 48/108 (44%), Positives = 67/108 (62%)
 Frame = +1

Query: 76  NAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLXKLWTLXSEQTXLKYASA 255
           NAGG HHHRIN DKYHPGYFGK+GM+++H  +N++FCP +NL KLWTL SEQT +  A  
Sbjct: 34  NAGGLHHHRINFDKYHPGYFGKVGMKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKN 93

Query: 256 PDGXVPAHQYCQSWILQVARQRQTPQTTCHSKSKVLLKISXEENQRCG 399
             G  P     +S   +V  + + P+     K+K   + + E+ +  G
Sbjct: 94  KTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVG 141



 Score = 37.9 bits (84), Expect = 0.016
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = +2

Query: 269 SPLINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXINDVGGACVLSA 421
           +P+I++V++           PKQPVIV            I  VGGACVL A
Sbjct: 98  APIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 148


>BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for
           IMAGE:3543815) protein.
          Length = 147

 Score =  107 bits (257), Expect = 2e-23
 Identities = 48/108 (44%), Positives = 67/108 (62%)
 Frame = +1

Query: 76  NAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLXKLWTLXSEQTXLKYASA 255
           NAGG HHHRIN DKYHPGYFGK+GM+++H  +N++FCP +NL KLWTL SEQT +  A  
Sbjct: 33  NAGGLHHHRINFDKYHPGYFGKVGMKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKN 92

Query: 256 PDGXVPAHQYCQSWILQVARQRQTPQTTCHSKSKVLLKISXEENQRCG 399
             G  P     +S   +V  + + P+     K+K   + + E+ +  G
Sbjct: 93  KTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVG 140



 Score = 37.9 bits (84), Expect = 0.016
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = +2

Query: 269 SPLINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXINDVGGACVLSA 421
           +P+I++V++           PKQPVIV            I  VGGACVL A
Sbjct: 97  APIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 147


>BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  107 bits (257), Expect = 2e-23
 Identities = 48/108 (44%), Positives = 67/108 (62%)
 Frame = +1

Query: 76  NAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLXKLWTLXSEQTXLKYASA 255
           NAGG HHHRIN DKYHPGYFGK+GM+++H  +N++FCP +NL KLWTL SEQT +  A  
Sbjct: 34  NAGGLHHHRINFDKYHPGYFGKVGMKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKN 93

Query: 256 PDGXVPAHQYCQSWILQVARQRQTPQTTCHSKSKVLLKISXEENQRCG 399
             G  P     +S   +V  + + P+     K+K   + + E+ +  G
Sbjct: 94  KTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVG 141



 Score = 37.9 bits (84), Expect = 0.016
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = +2

Query: 269 SPLINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXINDVGGACVLSA 421
           +P+I++V++           PKQPVIV            I  VGGACVL A
Sbjct: 98  APIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 148


>AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A
           protein.
          Length = 148

 Score =  107 bits (257), Expect = 2e-23
 Identities = 48/108 (44%), Positives = 67/108 (62%)
 Frame = +1

Query: 76  NAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLXKLWTLXSEQTXLKYASA 255
           NAGG HHHRIN DKYHPGYFGK+GM+++H  +N++FCP +NL KLWTL SEQT +  A  
Sbjct: 34  NAGGLHHHRINFDKYHPGYFGKVGMKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKN 93

Query: 256 PDGXVPAHQYCQSWILQVARQRQTPQTTCHSKSKVLLKISXEENQRCG 399
             G  P     +S   +V  + + P+     K+K   + + E+ +  G
Sbjct: 94  KTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVG 141



 Score = 37.9 bits (84), Expect = 0.016
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = +2

Query: 269 SPLINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXINDVGGACVLSA 421
           +P+I++V++           PKQPVIV            I  VGGACVL A
Sbjct: 98  APIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 148


>AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a
           protein.
          Length = 106

 Score =  103 bits (246), Expect = 4e-22
 Identities = 41/66 (62%), Positives = 50/66 (75%)
 Frame = +1

Query: 76  NAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLXKLWTLXSEQTXLKYASA 255
           NAGG HHHRIN DKYHPGYFGK+GM+++H  +N++FCP +NL KLWTL SEQT +  A  
Sbjct: 34  NAGGLHHHRINFDKYHPGYFGKVGMKHYHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKN 93

Query: 256 PDGXVP 273
             G  P
Sbjct: 94  KTGAAP 99


>BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  102 bits (244), Expect = 6e-22
 Identities = 46/108 (42%), Positives = 67/108 (62%)
 Frame = +1

Query: 76  NAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLXKLWTLXSEQTXLKYASA 255
           NAGG HHHRIN DKYHPGYFGK+GM++++  +N++FCP +NL KLWTL SEQT +  A  
Sbjct: 34  NAGGLHHHRINFDKYHPGYFGKVGMKHYNLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKN 93

Query: 256 PDGXVPAHQYCQSWILQVARQRQTPQTTCHSKSKVLLKISXEENQRCG 399
             G  P     +S   +V  + +  +     K+K+  + + E+ +  G
Sbjct: 94  KTGAAPIIDVVRSGYYKVLGKGKLAKQPVIVKAKLFSRRAEEKIKSVG 141



 Score = 34.7 bits (76), Expect = 0.15
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = +2

Query: 269 SPLINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXINDVGGACVLSA 421
           +P+I++V++            KQPVIV            I  VGGACVL A
Sbjct: 98  APIIDVVRSGYYKVLGKGKLAKQPVIVKAKLFSRRAEEKIKSVGGACVLVA 148


>AB007178-1|BAA25837.1|   34|Homo sapiens ribosomal protein L27a
           protein.
          Length = 34

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +1

Query: 193 LNLXKLWTLXSEQTXLKYASAPDGXVP 273
           +NL KLWTL SEQT +  A    G  P
Sbjct: 1   VNLDKLWTLVSEQTRVNAAKNKTGAAP 27


>AY358091-1|AAQ88458.1|  126|Homo sapiens VFLL3057 protein.
          Length = 126

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -2

Query: 146 PSLPKYPGWYLSMLIL*WCSPPALPRPPGCLRCFPIRPCP 27
           P+LPK+PG  ++ L   W S    P P G +    + PCP
Sbjct: 55  PALPKWPGHLMAELQGPWLSLAHCPSPSGPI----VLPCP 90


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,337,648
Number of Sequences: 237096
Number of extensions: 1063788
Number of successful extensions: 2486
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2485
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)