Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_K06
(444 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U66358-1|AAC47472.1| 149|Drosophila melanogaster RpL27a protein. 87 1e-17
U66357-1|AAC47475.1| 149|Drosophila melanogaster ribosomal prot... 87 1e-17
AY071144-1|AAL48766.1| 149|Drosophila melanogaster RE17991p pro... 87 1e-17
AE014134-746|AAF51006.3| 149|Drosophila melanogaster CG15442-PA... 87 1e-17
X74484-1|CAA52601.1| 149|Drosophila melanogaster ribosomal prot... 84 9e-17
D10228-1|BAA01080.1| 761|Drosophila melanogaster Ets domain pro... 28 6.6
X67704-1|CAA47941.1| 334|Drosophila melanogaster sperm protein ... 27 8.7
EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein. 27 8.7
EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein. 27 8.7
AY060667-1|AAL28215.1| 334|Drosophila melanogaster GH09231p pro... 27 8.7
AE014297-4221|AAF56779.1| 334|Drosophila melanogaster CG11719-P... 27 8.7
>U66358-1|AAC47472.1| 149|Drosophila melanogaster RpL27a protein.
Length = 149
Score = 86.6 bits (205), Expect = 1e-17
Identities = 40/108 (37%), Positives = 56/108 (51%)
Frame = +1
Query: 76 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLXKLWTLXSEQTXLKYASA 255
NAGG HHHRIN DKYHPGYFGK+GMRNFH + F P +NL KLW+L + +
Sbjct: 35 NAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFRPEINLDKLWSLVGAEKFAELEKE 94
Query: 256 PDGXVPAHQYCQSWILQVARQRQTPQTTCHSKSKVLLKISXEENQRCG 399
P + ++ + P K+K K + ++ ++ G
Sbjct: 95 KSTKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAG 142
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +2
Query: 269 SPLINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXINDVGGACVLSA 421
+P+I++VK P +PVIV I GG C+LSA
Sbjct: 99 APVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149
>U66357-1|AAC47475.1| 149|Drosophila melanogaster ribosomal protein
RpL27a protein.
Length = 149
Score = 86.6 bits (205), Expect = 1e-17
Identities = 40/108 (37%), Positives = 56/108 (51%)
Frame = +1
Query: 76 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLXKLWTLXSEQTXLKYASA 255
NAGG HHHRIN DKYHPGYFGK+GMRNFH + F P +NL KLW+L + +
Sbjct: 35 NAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFRPEINLDKLWSLVGAEKFAELEKE 94
Query: 256 PDGXVPAHQYCQSWILQVARQRQTPQTTCHSKSKVLLKISXEENQRCG 399
P + ++ + P K+K K + ++ ++ G
Sbjct: 95 KSTKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAG 142
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +2
Query: 269 SPLINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXINDVGGACVLSA 421
+P+I++VK P +PVIV I GG C+LSA
Sbjct: 99 APVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149
>AY071144-1|AAL48766.1| 149|Drosophila melanogaster RE17991p
protein.
Length = 149
Score = 86.6 bits (205), Expect = 1e-17
Identities = 40/108 (37%), Positives = 56/108 (51%)
Frame = +1
Query: 76 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLXKLWTLXSEQTXLKYASA 255
NAGG HHHRIN DKYHPGYFGK+GMRNFH + F P +NL KLW+L + +
Sbjct: 35 NAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFRPEINLDKLWSLVGAEKFAELEKE 94
Query: 256 PDGXVPAHQYCQSWILQVARQRQTPQTTCHSKSKVLLKISXEENQRCG 399
P + ++ + P K+K K + ++ ++ G
Sbjct: 95 KSTKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAG 142
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +2
Query: 269 SPLINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXINDVGGACVLSA 421
+P+I++VK P +PVIV I GG C+LSA
Sbjct: 99 APVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149
>AE014134-746|AAF51006.3| 149|Drosophila melanogaster CG15442-PA
protein.
Length = 149
Score = 86.6 bits (205), Expect = 1e-17
Identities = 40/108 (37%), Positives = 56/108 (51%)
Frame = +1
Query: 76 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLXKLWTLXSEQTXLKYASA 255
NAGG HHHRIN DKYHPGYFGK+GMRNFH + F P +NL KLW+L + +
Sbjct: 35 NAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFRPEINLDKLWSLVGAEKFAELEKE 94
Query: 256 PDGXVPAHQYCQSWILQVARQRQTPQTTCHSKSKVLLKISXEENQRCG 399
P + ++ + P K+K K + ++ ++ G
Sbjct: 95 KSTKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAG 142
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +2
Query: 269 SPLINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXINDVGGACVLSA 421
+P+I++VK P +PVIV I GG C+LSA
Sbjct: 99 APVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149
>X74484-1|CAA52601.1| 149|Drosophila melanogaster ribosomal protein
L27a protein.
Length = 149
Score = 83.8 bits (198), Expect = 9e-17
Identities = 33/48 (68%), Positives = 37/48 (77%)
Frame = +1
Query: 76 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLXKLWTL 219
N GG HHHRIN DKYHPGYFGK+GMRNFH + F P +NL KLW+L
Sbjct: 35 NLGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFRPEINLDKLWSL 82
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 269 SPLINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXINDVGGACVLSA 421
+P+I++VK P +PVIV I + GG C+LSA
Sbjct: 99 APVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKEAGGVCLLSA 149
>D10228-1|BAA01080.1| 761|Drosophila melanogaster Ets domain
protein protein.
Length = 761
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 268 VPAHQYCQSWILQVARQRQTPQTTCHSKSKVLLKIS 375
V H C+ + +A R+TP TC S+ + +L+ S
Sbjct: 708 VNRHSQCRWKAIAMAASRRTPSDTCSSRRRSVLRQS 743
>X67704-1|CAA47941.1| 334|Drosophila melanogaster sperm protein
protein.
Length = 334
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 92 CSPPALPRPPGCLRCFPIRPCP 27
CSPP P C C+P P P
Sbjct: 290 CSPPCPYESPECGPCYPCAPTP 311
>EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 82 GGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKN 180
GG+ +M++YH G G+R H+ N N
Sbjct: 410 GGDSQSESDMNEYHDNGEGHDGLRPSHYNSNSN 442
>EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 82 GGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKN 180
GG+ +M++YH G G+R H+ N N
Sbjct: 410 GGDSQSESDMNEYHDNGEGHDGLRPSHYNSNSN 442
>AY060667-1|AAL28215.1| 334|Drosophila melanogaster GH09231p
protein.
Length = 334
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 92 CSPPALPRPPGCLRCFPIRPCP 27
CSPP P C C+P P P
Sbjct: 290 CSPPCPYESPECGPCYPCAPTP 311
>AE014297-4221|AAF56779.1| 334|Drosophila melanogaster CG11719-PA
protein.
Length = 334
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2
Query: 92 CSPPALPRPPGCLRCFPIRPCP 27
CSPP P C C+P P P
Sbjct: 290 CSPPCPYESPECGPCYPCAPTP 311
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,079,167
Number of Sequences: 53049
Number of extensions: 328268
Number of successful extensions: 1267
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1438687674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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