Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_K05
         (321 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    20   5.5  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    19   9.7  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 117 RSCSNRHGLIRKYGLNIC 170
           R C+  HGL+    LNIC
Sbjct: 473 RKCN--HGLVYDLELNIC 488


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 19.4 bits (38), Expect = 9.7
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +3

Query: 60  TQXFGILTLAEYGQGSRSCRSCS 128
           T+ FG L +    +G ++C + S
Sbjct: 22  TKIFGFLPVCSSQKGQKTCLNLS 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,041
Number of Sequences: 336
Number of extensions: 884
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6048897
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)