Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_K05
         (321 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0486 + 19577507-19577568,19578119-19578218,19581128-195812...    64   3e-11
11_06_0483 + 24118047-24118108,24118952-24119051,24119330-24119338     63   4e-11
03_06_0123 - 31821915-31822094,31822187-31822324,31822413-318228...    63   4e-11
11_01_0113 + 881806-881996,882831-882921,883140-883255,884489-88...    27   2.5  
03_05_0487 + 24838620-24838967,24840526-24840747,24840819-248411...    27   3.3  
06_03_0458 - 20995834-20996004,20996404-20997309,20997778-209979...    26   7.6  

>12_02_0486 +
           19577507-19577568,19578119-19578218,19581128-19581214,
           19581852-19581914
          Length = 103

 Score = 63.7 bits (148), Expect = 3e-11
 Identities = 28/42 (66%), Positives = 29/42 (69%)
 Frame = +3

Query: 93  YGQGSRSCRSCSNRHGLIRKYGLNICRQCFXEYAHDIXFKKL 218
           YG GSR CR C N HGLIRKYGL  CRQCF   A DI F K+
Sbjct: 14  YGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIKV 55



 Score = 26.2 bits (55), Expect = 5.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 53 MGHANXWYSHPR 88
          MGH+N W SHP+
Sbjct: 1  MGHSNVWNSHPK 12


>11_06_0483 + 24118047-24118108,24118952-24119051,24119330-24119338
          Length = 56

 Score = 63.3 bits (147), Expect = 4e-11
 Identities = 28/41 (68%), Positives = 28/41 (68%)
 Frame = +3

Query: 93  YGQGSRSCRSCSNRHGLIRKYGLNICRQCFXEYAHDIXFKK 215
           YG GSR CR C N HGLIRKYGL  CRQCF   A DI F K
Sbjct: 14  YGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIK 54



 Score = 26.2 bits (55), Expect = 5.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 53 MGHANXWYSHPR 88
          MGH+N W SHP+
Sbjct: 1  MGHSNVWNSHPK 12


>03_06_0123 -
           31821915-31822094,31822187-31822324,31822413-31822817,
           31822897-31823212,31823305-31823543,31823800-31823903,
           31823987-31824145,31824326-31824510,31825318-31825427,
           31826900-31826947,31827047-31827241,31827354-31827422,
           31829521-31829620,31829879-31829940
          Length = 769

 Score = 63.3 bits (147), Expect = 4e-11
 Identities = 28/41 (68%), Positives = 28/41 (68%)
 Frame = +3

Query: 93  YGQGSRSCRSCSNRHGLIRKYGLNICRQCFXEYAHDIXFKK 215
           YG GSR CR C N HGLIRKYGL  CRQCF   A DI F K
Sbjct: 14  YGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIK 54



 Score = 26.2 bits (55), Expect = 5.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 53 MGHANXWYSHPR 88
          MGH+N W SHP+
Sbjct: 1  MGHSNVWNSHPK 12


>11_01_0113 +
           881806-881996,882831-882921,883140-883255,884489-885260
          Length = 389

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -3

Query: 160 KPYLRIKPCLLEQDRHDRDPCPYSARVRIPXICVAHFKKLNC 35
           +P  R  P +L + R  R PCP+S   +   + + H    NC
Sbjct: 27  RPATRSAPSILWRRRRPRSPCPWSVE-KGEEVVLVHASMGNC 67


>03_05_0487 + 24838620-24838967,24840526-24840747,24840819-24841109,
            24841316-24841513,24841641-24841705,24841788-24841874,
            24841988-24842108,24842200-24842244,24842321-24842458,
            24842571-24842643,24842723-24842799,24842882-24842989,
            24843108-24843224,24843524-24843679,24843780-24843881,
            24844036-24844161,24844237-24844314,24844390-24844485,
            24844592-24844707,24844781-24844850,24844930-24844983,
            24845062-24845205,24845297-24845596,24845780-24846202,
            24846316-24846429
          Length = 1222

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +3

Query: 72   GILTLAEYGQGSRSCRSCSNRHGLIRKYGLNICRQCFXE 188
            G++ +A   + S  CR C N+  +++ +    C+  F E
Sbjct: 1160 GLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE 1198


>06_03_0458 -
           20995834-20996004,20996404-20997309,20997778-20997942,
           20998024-20998353,20998471-20998527,20998579-20998692,
           20999220-20999381,20999465-20999527,21001100-21001207,
           21001598-21001675,21001771-21001902
          Length = 761

 Score = 25.8 bits (54), Expect = 7.6
 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
 Frame = +3

Query: 90  EYGQGSRSCRSCSNRHGLIRKYGLNI-------CRQCFXEYAHDI 203
           EY   SR C  C+   GL RK G  I        R    E+ HDI
Sbjct: 420 EYADPSRQCAHCAFFMGLSRKEGAKIQEGQQFDIRGTVDEFRHDI 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,032,775
Number of Sequences: 37544
Number of extensions: 102124
Number of successful extensions: 229
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 411066120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)