Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_K04
(651 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23D3.07 |pup1||20S proteasome component beta 2|Schizosacchar... 210 1e-55
SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyc... 99 5e-22
SPAC4A8.13c |pts1||20S proteasome component beta 5|Schizosacchar... 59 5e-10
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 55 8e-09
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 47 2e-06
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 39 5e-04
SPAC22F8.06 |pam1||20S proteasome component beta 6|Schizosacchar... 37 0.002
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 36 0.007
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 33 0.027
SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyce... 31 0.11
SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces... 25 7.2
>SPAC23D3.07 |pup1||20S proteasome component beta
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 210 bits (513), Expect = 1e-55
Identities = 96/161 (59%), Positives = 120/161 (74%)
Frame = +1
Query: 169 FENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHY 348
FE +QRN L +KGFP PKAT TGTTIVG+I D ++LGADTRAT +++DKNC+K+H
Sbjct: 12 FEYYQRNLLLQEKGFPTPKATSTGTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHL 71
Query: 349 LXSNMYCCGAGTAADTEMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGHIGA 528
+ N++C GAGTAADTE T ++S +EL L+T R V TA T+LK+ LFRYQGHIGA
Sbjct: 72 ISPNIWCAGAGTAADTEFVTSMISSNIELHSLYTNRKPRVVTALTMLKQHLFRYQGHIGA 131
Query: 529 ALVLGGVDRTGPHIYCIYPHGSVXKLPYATMGSGSLAAMAV 651
LVLGG D GPH++ I HGS KLPY +GSGSLAA++V
Sbjct: 132 YLVLGGYDCKGPHLFTIAAHGSSDKLPYVALGSGSLAAISV 172
>SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 99.1 bits (236), Expect = 5e-22
Identities = 51/135 (37%), Positives = 76/135 (56%), Gaps = 1/135 (0%)
Frame = +1
Query: 232 KTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLXSNMYCCGAGTAADTEMTTQ 411
+ GTTI + Y DGVIL AD+R T ++++ K+ L N++CC +G+AADT+
Sbjct: 22 RMGTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVAD 81
Query: 412 SVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGHIGAALVLGGVD-RTGPHIYCIYPH 588
+ L + R+ G V TAATL M ++ + + A L++ G D +TG +Y I
Sbjct: 82 LLKYYLSMYRIQFGHDPSVHTAATLASEMCYQNKNMLSAGLIVAGYDEKTGGDVYSIPLG 141
Query: 589 GSVXKLPYATMGSGS 633
GS+ K P A GSGS
Sbjct: 142 GSLHKQPLAIGGSGS 156
>SPAC4A8.13c |pts1||20S proteasome component beta
5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 59.3 bits (137), Expect = 5e-10
Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Frame = +1
Query: 238 GTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLXSNMYCCG--AGTAADTEMTTQ 411
GTT + Y G+++ D+RA+ +++ + +K+ + N Y G AG AAD +
Sbjct: 61 GTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKV--IEINPYLLGTLAGGAADCQFWET 118
Query: 412 SVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGH-IGAALVLGGVDRTGPHIYCIYPH 588
+ + L +L + V A+ +L + + Y+G+ + +L G + G +Y I
Sbjct: 119 VLGMECRLHQLRNKELISVSAASKILSNITYSYKGYGLSMGTMLAGTGKGGTALYYIDSD 178
Query: 589 GSVXKLPYATMGSGSLAAMAV 651
G+ K ++GSGS A V
Sbjct: 179 GTRLKGDLFSVGSGSTFAYGV 199
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 55.2 bits (127), Expect = 8e-09
Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 11/150 (7%)
Frame = +1
Query: 217 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLXSNMYCCGAGTAADT 396
A +A K G+T +G+ D V+LG + R T + ++ + +K+ + S++ C +G AD
Sbjct: 27 AIEAIKLGSTAIGVKTKDAVVLGVEKRLT-SPLMESHSVEKLFEIDSHIGCAISGLTADA 85
Query: 397 EMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRY-QGH----------IGAALVLG 543
+ Q + R +E+ + + R+ +G G AL++
Sbjct: 86 RTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEERIMSRPFGVALLIA 145
Query: 544 GVDRTGPHIYCIYPHGSVXKLPYATMGSGS 633
G+D GP +Y P G+ + +GSGS
Sbjct: 146 GIDEHGPQLYHSEPSGTYFRYEAKAIGSGS 175
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 47.2 bits (107), Expect = 2e-06
Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 7/171 (4%)
Frame = +1
Query: 160 DSRFENFQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQK 339
DSR F L Q + G + GI+ DG++L A+ + T + +++ +K
Sbjct: 6 DSRTTIFSPEGRLYQVEYALEAINHAGVAL-GIVAKDGIVLAAEKKVTSKLLEQEESAEK 64
Query: 340 IHYLXSNMYCCGAGTAADTEMTTQSVASQLELQRLHT-GRTVPVETAATL---LKRMLFR 507
++++ NM C AG AD + + A ++ Q L T +P E LK+ +
Sbjct: 65 LYHIGDNMLCAVAGLTADANILI-NYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGYTQ 123
Query: 508 YQG--HIGAALVLGGVDR-TGPHIYCIYPHGSVXKLPYATMGSGSLAAMAV 651
Y G G + + G D G ++ P G+ ++G S + ++
Sbjct: 124 YGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQSL 174
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 39.1 bits (87), Expect = 5e-04
Identities = 35/161 (21%), Positives = 66/161 (40%), Gaps = 6/161 (3%)
Frame = +1
Query: 178 FQRNAFLAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLXS 357
F N L Q + A A G T VGI DGV+L + + T + + +K+ +
Sbjct: 12 FSPNGKLVQIEY-ALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIG-ASLEKVCAITP 69
Query: 358 NMYCCGAGTAADTEMTTQSV--ASQLELQRLHTG----RTVPVETAATLLKRMLFRYQGH 519
++ +G D + +Q ++++ + + E A+ + +
Sbjct: 70 DIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQESTQSGGVRP 129
Query: 520 IGAALVLGGVDRTGPHIYCIYPHGSVXKLPYATMGSGSLAA 642
G +L++ G+D GP +Y + P G+ +G S AA
Sbjct: 130 FGVSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAA 170
>SPAC22F8.06 |pam1||20S proteasome component beta
6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 225
Score = 37.1 bits (82), Expect = 0.002
Identities = 29/129 (22%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Frame = +1
Query: 220 PKATKTGTTIVGIIYADG-VILGADTRATENTVVSDKNCQKIHYLXSNMYCCGAGTAADT 396
P GTT+ I DG IL DTR+ ++ + ++H + ++ +G AD
Sbjct: 8 PYVQNGGTTVA--IAGDGFAILAGDTRSVNGYNINTRFQPRVHEVGDDLVIGASGFEADA 65
Query: 397 EMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLF--RYQGHIGAALVLGGVDRTGP-H 567
+ + +++L + R + ++ A +++ +L+ R+ + + G+D+ G
Sbjct: 66 LALVKRIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYY-VYTTVAGIDKEGKGE 124
Query: 568 IYCIYPHGS 594
IY P GS
Sbjct: 125 IYSFDPVGS 133
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 35.5 bits (78), Expect = 0.007
Identities = 35/147 (23%), Positives = 54/147 (36%), Gaps = 5/147 (3%)
Frame = +1
Query: 217 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLXSNMYCCGAGTAADT 396
A KA + +T +GI DGVIL + T + N +I + ++ G D
Sbjct: 26 AYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVN-NRIGSVDRHIGIATTGFIPDG 84
Query: 397 EMTTQSVASQLELQRLHTGRTVPVETAATLLKR--MLFRYQGHI---GAALVLGGVDRTG 561
+ + + R + G +P A L LF + G + D G
Sbjct: 85 QHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGVMSFVATYDSEG 144
Query: 562 PHIYCIYPHGSVXKLPYATMGSGSLAA 642
PH+Y + P+G A G G A
Sbjct: 145 PHLYMVEPNGVYWGYNGAAAGKGRQVA 171
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 33.5 bits (73), Expect = 0.027
Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 5/147 (3%)
Frame = +1
Query: 217 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLXSNMYCCGAGTAADT 396
A +A K G+ VG++ +L A R E K K+ + ++ AG A D
Sbjct: 25 ALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQK---KLIRIDDHIGIAIAGLAPDA 81
Query: 397 EMTTQSVASQLELQRLHTGRTVPVETAAT-LLKRMLFRYQGH----IGAALVLGGVDRTG 561
+ + + + + R +PV + + ++ Q + G ++ G D +G
Sbjct: 82 RVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINTQEYGRRPYGVGFLVIGYDESG 141
Query: 562 PHIYCIYPHGSVXKLPYATMGSGSLAA 642
PH+ P G V + +MGS S +A
Sbjct: 142 PHLLEFQPSGLVLEYLGTSMGSRSQSA 168
>SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 262
Score = 31.5 bits (68), Expect = 0.11
Identities = 16/73 (21%), Positives = 39/73 (53%)
Frame = +1
Query: 235 TGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLXSNMYCCGAGTAADTEMTTQS 414
TG++++ + +ADGV++ AD A+ ++ + +++ + N G +D + Q
Sbjct: 42 TGSSVLALKFADGVMIAADNLASYGSLARFYDVERLTKVGDNTIVGAGGDISDYQQ-IQR 100
Query: 415 VASQLELQRLHTG 453
+ +LE++ + G
Sbjct: 101 LLEKLEIKEGNYG 113
>SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 995
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 579 NAVNMRTGSVNTSQNQSSPYMALIAK*HSFQQCGSSF 469
N + M+ S+ T + + +PY L+A + CGS +
Sbjct: 861 NIIPMQKPSLTTHETKQNPYDLLVALDSDRKACGSLY 897
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,492,368
Number of Sequences: 5004
Number of extensions: 46508
Number of successful extensions: 127
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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