Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_K03
(650 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X68836-1|CAA48726.1| 395|Homo sapiens S-adenosylmethionine synt... 300 2e-81
DQ083239-1|AAY85355.1| 395|Homo sapiens methionine adenosyltran... 300 2e-81
BC001854-1|AAH01854.1| 395|Homo sapiens methionine adenosyltran... 300 2e-81
BC001686-1|AAH01686.1| 395|Homo sapiens methionine adenosyltran... 300 2e-81
AC016753-1|AAY24339.1| 395|Homo sapiens unknown protein. 300 2e-81
X69078-1|CAA48822.1| 395|Homo sapiens methionine adenosyltransf... 284 2e-76
D49357-1|BAA08355.1| 395|Homo sapiens S-adenosylmethionine synt... 284 2e-76
BC018359-1|AAH18359.1| 395|Homo sapiens methionine adenosyltran... 284 2e-76
AL359195-2|CAI13695.1| 395|Homo sapiens methionine adenosyltran... 284 2e-76
AL359195-3|CAI13696.1| 145|Homo sapiens methionine adenosyltran... 138 2e-32
BX640851-1|CAE45919.1| 467|Homo sapiens hypothetical protein pr... 33 0.88
BC060879-1|AAH60879.1| 590|Homo sapiens chromosome 7 open readi... 33 0.88
BC043269-1|AAH43269.1| 590|Homo sapiens chromosome 7 open readi... 33 0.88
BC015397-1|AAH15397.2| 353|Homo sapiens C7orf31 protein protein. 33 0.88
AK098189-1|BAC05255.1| 380|Homo sapiens protein ( Homo sapiens ... 33 0.88
AK097248-1|BAC04985.1| 590|Homo sapiens protein ( Homo sapiens ... 33 0.88
AC004129-1|AAP22338.1| 300|Homo sapiens unknown protein. 33 0.88
BC028352-1|AAH28352.1| 691|Homo sapiens TBC1 domain family, mem... 30 6.2
AY358555-1|AAQ88919.1| 1211|Homo sapiens Patched 2 protein. 30 8.2
AK022147-1|BAB13971.1| 674|Homo sapiens protein ( Homo sapiens ... 30 8.2
>X68836-1|CAA48726.1| 395|Homo sapiens S-adenosylmethionine
synthetase protein.
Length = 395
Score = 300 bits (737), Expect = 2e-81
Identities = 142/187 (75%), Positives = 161/187 (86%), Gaps = 1/187 (0%)
Frame = +1
Query: 91 MNGYAKTNG-HSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACE 267
MNG + NG H +E+G+ FLFTSESVGEGHPDK+CDQISDA+L AHL QDPDAKVACE
Sbjct: 1 MNG--QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACE 57
Query: 268 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALXQQSPNI 447
T+ KTGM+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFDYKTC+V++AL QQSP+I
Sbjct: 58 TVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDI 117
Query: 448 AAGVHXNRNDEEVGAGDQGLMFGYATDXTXXCMPLTVVLAHKLNQKIAELXRNGEFWWAR 627
A GVH +RN+E++GAGDQGLMFGYATD T CMPLT+VLAHKLN K+AEL RNG W R
Sbjct: 118 AQGVHLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLR 177
Query: 628 PDSKTQV 648
PDSKTQV
Sbjct: 178 PDSKTQV 184
>DQ083239-1|AAY85355.1| 395|Homo sapiens methionine
adenosyltransferase II protein.
Length = 395
Score = 300 bits (737), Expect = 2e-81
Identities = 142/187 (75%), Positives = 161/187 (86%), Gaps = 1/187 (0%)
Frame = +1
Query: 91 MNGYAKTNG-HSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACE 267
MNG + NG H +E+G+ FLFTSESVGEGHPDK+CDQISDA+L AHL QDPDAKVACE
Sbjct: 1 MNG--QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACE 57
Query: 268 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALXQQSPNI 447
T+ KTGM+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFDYKTC+V++AL QQSP+I
Sbjct: 58 TVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDI 117
Query: 448 AAGVHXNRNDEEVGAGDQGLMFGYATDXTXXCMPLTVVLAHKLNQKIAELXRNGEFWWAR 627
A GVH +RN+E++GAGDQGLMFGYATD T CMPLT+VLAHKLN K+AEL RNG W R
Sbjct: 118 AQGVHLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLR 177
Query: 628 PDSKTQV 648
PDSKTQV
Sbjct: 178 PDSKTQV 184
>BC001854-1|AAH01854.1| 395|Homo sapiens methionine
adenosyltransferase II, alpha protein.
Length = 395
Score = 300 bits (737), Expect = 2e-81
Identities = 142/187 (75%), Positives = 161/187 (86%), Gaps = 1/187 (0%)
Frame = +1
Query: 91 MNGYAKTNG-HSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACE 267
MNG + NG H +E+G+ FLFTSESVGEGHPDK+CDQISDA+L AHL QDPDAKVACE
Sbjct: 1 MNG--QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACE 57
Query: 268 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALXQQSPNI 447
T+ KTGM+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFDYKTC+V++AL QQSP+I
Sbjct: 58 TVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDI 117
Query: 448 AAGVHXNRNDEEVGAGDQGLMFGYATDXTXXCMPLTVVLAHKLNQKIAELXRNGEFWWAR 627
A GVH +RN+E++GAGDQGLMFGYATD T CMPLT+VLAHKLN K+AEL RNG W R
Sbjct: 118 AQGVHLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLR 177
Query: 628 PDSKTQV 648
PDSKTQV
Sbjct: 178 PDSKTQV 184
>BC001686-1|AAH01686.1| 395|Homo sapiens methionine
adenosyltransferase II, alpha protein.
Length = 395
Score = 300 bits (737), Expect = 2e-81
Identities = 142/187 (75%), Positives = 161/187 (86%), Gaps = 1/187 (0%)
Frame = +1
Query: 91 MNGYAKTNG-HSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACE 267
MNG + NG H +E+G+ FLFTSESVGEGHPDK+CDQISDA+L AHL QDPDAKVACE
Sbjct: 1 MNG--QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACE 57
Query: 268 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALXQQSPNI 447
T+ KTGM+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFDYKTC+V++AL QQSP+I
Sbjct: 58 TVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDI 117
Query: 448 AAGVHXNRNDEEVGAGDQGLMFGYATDXTXXCMPLTVVLAHKLNQKIAELXRNGEFWWAR 627
A GVH +RN+E++GAGDQGLMFGYATD T CMPLT+VLAHKLN K+AEL RNG W R
Sbjct: 118 AQGVHLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLR 177
Query: 628 PDSKTQV 648
PDSKTQV
Sbjct: 178 PDSKTQV 184
>AC016753-1|AAY24339.1| 395|Homo sapiens unknown protein.
Length = 395
Score = 300 bits (737), Expect = 2e-81
Identities = 142/187 (75%), Positives = 161/187 (86%), Gaps = 1/187 (0%)
Frame = +1
Query: 91 MNGYAKTNG-HSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACE 267
MNG + NG H +E+G+ FLFTSESVGEGHPDK+CDQISDA+L AHL QDPDAKVACE
Sbjct: 1 MNG--QLNGFHEAFIEEGT-FLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACE 57
Query: 268 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALXQQSPNI 447
T+ KTGM+LL GEITS+A VDYQKVVRE VKHIGYDDSSKGFDYKTC+V++AL QQSP+I
Sbjct: 58 TVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDI 117
Query: 448 AAGVHXNRNDEEVGAGDQGLMFGYATDXTXXCMPLTVVLAHKLNQKIAELXRNGEFWWAR 627
A GVH +RN+E++GAGDQGLMFGYATD T CMPLT+VLAHKLN K+AEL RNG W R
Sbjct: 118 AQGVHLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLR 177
Query: 628 PDSKTQV 648
PDSKTQV
Sbjct: 178 PDSKTQV 184
>X69078-1|CAA48822.1| 395|Homo sapiens methionine
adenosyltransferase protein.
Length = 395
Score = 284 bits (697), Expect = 2e-76
Identities = 128/175 (73%), Positives = 154/175 (88%)
Frame = +1
Query: 124 YDMEDGSVFLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCG 303
+ + +G VF+FTSESVGEGHPDK+CDQISDA+L AHL QDP+AKVACET+ KTGMVLLCG
Sbjct: 11 HSLSEG-VFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCG 69
Query: 304 EITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALXQQSPNIAAGVHXNRNDEE 483
EITS A VDYQ+VVR+T+KHIGYDDS+KGFD+KTC+V++AL QQSP+IA VH +RN+E+
Sbjct: 70 EITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEED 129
Query: 484 VGAGDQGLMFGYATDXTXXCMPLTVVLAHKLNQKIAELXRNGEFWWARPDSKTQV 648
VGAGDQGLMFGYATD T CMPLT++LAHKLN ++A+L R+G W RPDSKTQV
Sbjct: 130 VGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQV 184
>D49357-1|BAA08355.1| 395|Homo sapiens S-adenosylmethionine
synthetase protein.
Length = 395
Score = 284 bits (697), Expect = 2e-76
Identities = 128/175 (73%), Positives = 154/175 (88%)
Frame = +1
Query: 124 YDMEDGSVFLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCG 303
+ + +G VF+FTSESVGEGHPDK+CDQISDA+L AHL QDP+AKVACET+ KTGMVLLCG
Sbjct: 11 HSLSEG-VFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCG 69
Query: 304 EITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALXQQSPNIAAGVHXNRNDEE 483
EITS A VDYQ+VVR+T+KHIGYDDS+KGFD+KTC+V++AL QQSP+IA VH +RN+E+
Sbjct: 70 EITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEED 129
Query: 484 VGAGDQGLMFGYATDXTXXCMPLTVVLAHKLNQKIAELXRNGEFWWARPDSKTQV 648
VGAGDQGLMFGYATD T CMPLT++LAHKLN ++A+L R+G W RPDSKTQV
Sbjct: 130 VGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQV 184
>BC018359-1|AAH18359.1| 395|Homo sapiens methionine
adenosyltransferase I, alpha protein.
Length = 395
Score = 284 bits (697), Expect = 2e-76
Identities = 128/175 (73%), Positives = 154/175 (88%)
Frame = +1
Query: 124 YDMEDGSVFLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCG 303
+ + +G VF+FTSESVGEGHPDK+CDQISDA+L AHL QDP+AKVACET+ KTGMVLLCG
Sbjct: 11 HSLSEG-VFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCG 69
Query: 304 EITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALXQQSPNIAAGVHXNRNDEE 483
EITS A VDYQ+VVR+T+KHIGYDDS+KGFD+KTC+V++AL QQSP+IA VH +RN+E+
Sbjct: 70 EITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEED 129
Query: 484 VGAGDQGLMFGYATDXTXXCMPLTVVLAHKLNQKIAELXRNGEFWWARPDSKTQV 648
VGAGDQGLMFGYATD T CMPLT++LAHKLN ++A+L R+G W RPDSKTQV
Sbjct: 130 VGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQV 184
>AL359195-2|CAI13695.1| 395|Homo sapiens methionine
adenosyltransferase I, alpha protein.
Length = 395
Score = 284 bits (697), Expect = 2e-76
Identities = 128/175 (73%), Positives = 154/175 (88%)
Frame = +1
Query: 124 YDMEDGSVFLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCG 303
+ + +G VF+FTSESVGEGHPDK+CDQISDA+L AHL QDP+AKVACET+ KTGMVLLCG
Sbjct: 11 HSLSEG-VFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCG 69
Query: 304 EITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALXQQSPNIAAGVHXNRNDEE 483
EITS A VDYQ+VVR+T+KHIGYDDS+KGFD+KTC+V++AL QQSP+IA VH +RN+E+
Sbjct: 70 EITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEED 129
Query: 484 VGAGDQGLMFGYATDXTXXCMPLTVVLAHKLNQKIAELXRNGEFWWARPDSKTQV 648
VGAGDQGLMFGYATD T CMPLT++LAHKLN ++A+L R+G W RPDSKTQV
Sbjct: 130 VGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQV 184
>AL359195-3|CAI13696.1| 145|Homo sapiens methionine
adenosyltransferase I, alpha protein.
Length = 145
Score = 138 bits (333), Expect = 2e-32
Identities = 63/99 (63%), Positives = 80/99 (80%), Gaps = 3/99 (3%)
Frame = +1
Query: 361 HIGYDDSSK---GFDYKTCSVMLALXQQSPNIAAGVHXNRNDEEVGAGDQGLMFGYATDX 531
H+ D ++K GFD+KTC+V++AL QQSP+IA VH +RN+E+VGAGDQGLMFGYATD
Sbjct: 23 HLKQDPNAKVACGFDFKTCNVLVALEQQSPDIAQCVHLDRNEEDVGAGDQGLMFGYATDE 82
Query: 532 TXXCMPLTVVLAHKLNQKIAELXRNGEFWWARPDSKTQV 648
T CMPLT++LAHKLN ++A+L R+G W RPDSKTQV
Sbjct: 83 TEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQV 121
Score = 72.9 bits (171), Expect = 9e-13
Identities = 41/81 (50%), Positives = 48/81 (59%)
Frame = +1
Query: 163 ESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKV 342
ESVGEGHPDK+CDQISDA+L AHL QDP+AKVAC KT VL+ E S +
Sbjct: 1 ESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACGFDFKTCNVLVALEQQSPDIAQCVHL 60
Query: 343 VRETVKHIGYDDSSKGFDYKT 405
R + +G D F Y T
Sbjct: 61 DRNE-EDVGAGDQGLMFGYAT 80
>BX640851-1|CAE45919.1| 467|Homo sapiens hypothetical protein
protein.
Length = 467
Score = 33.1 bits (72), Expect = 0.88
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 436 SPNIAAGV-HXNRNDEEVGAGDQGLMFGYATDXTXXCMPLTVVLAHKLNQKIAELXRNGE 612
S NI AGV H N++ EE +Q L+ Y LT + K KI + + +
Sbjct: 258 SDNIPAGVTHKNQDIEEKIIEEQSLLSTYELPSCYPTKDLTSIYDIKPFPKITDTKKTED 317
Query: 613 FWWARPDSKTQ 645
+W + KTQ
Sbjct: 318 LYWRQQSLKTQ 328
>BC060879-1|AAH60879.1| 590|Homo sapiens chromosome 7 open reading
frame 31 protein.
Length = 590
Score = 33.1 bits (72), Expect = 0.88
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 436 SPNIAAGV-HXNRNDEEVGAGDQGLMFGYATDXTXXCMPLTVVLAHKLNQKIAELXRNGE 612
S NI AGV H N++ EE +Q L+ Y LT + K KI + + +
Sbjct: 381 SDNIPAGVTHKNQDIEEKIIEEQSLLSTYELPSCYPTKDLTSIYDIKPFPKITDTKKTED 440
Query: 613 FWWARPDSKTQ 645
+W + KTQ
Sbjct: 441 LYWRQQSLKTQ 451
>BC043269-1|AAH43269.1| 590|Homo sapiens chromosome 7 open reading
frame 31 protein.
Length = 590
Score = 33.1 bits (72), Expect = 0.88
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 436 SPNIAAGV-HXNRNDEEVGAGDQGLMFGYATDXTXXCMPLTVVLAHKLNQKIAELXRNGE 612
S NI AGV H N++ EE +Q L+ Y LT + K KI + + +
Sbjct: 381 SDNIPAGVTHKNQDIEEKIIEEQSLLSTYELPSCYPTKDLTSIYDIKPFPKITDTKKTED 440
Query: 613 FWWARPDSKTQ 645
+W + KTQ
Sbjct: 441 LYWRQQSLKTQ 451
>BC015397-1|AAH15397.2| 353|Homo sapiens C7orf31 protein protein.
Length = 353
Score = 33.1 bits (72), Expect = 0.88
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 436 SPNIAAGV-HXNRNDEEVGAGDQGLMFGYATDXTXXCMPLTVVLAHKLNQKIAELXRNGE 612
S NI AGV H N++ EE +Q L+ Y LT + K KI + + +
Sbjct: 144 SDNIPAGVTHKNQDIEEKIIEEQSLLSTYELPSCYPTKDLTSIYDIKPFPKITDTKKTED 203
Query: 613 FWWARPDSKTQ 645
+W + KTQ
Sbjct: 204 LYWRQQSLKTQ 214
>AK098189-1|BAC05255.1| 380|Homo sapiens protein ( Homo sapiens
cDNA FLJ40870 fis, clone TSTOM2000315. ).
Length = 380
Score = 33.1 bits (72), Expect = 0.88
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 436 SPNIAAGV-HXNRNDEEVGAGDQGLMFGYATDXTXXCMPLTVVLAHKLNQKIAELXRNGE 612
S NI AGV H N++ EE +Q L+ Y LT + K KI + + +
Sbjct: 171 SDNIPAGVTHKNQDIEEKIIEEQSLLSTYELPSCYPTKDLTSIYDIKPFPKITDTKKTED 230
Query: 613 FWWARPDSKTQ 645
+W + KTQ
Sbjct: 231 LYWRQQSLKTQ 241
>AK097248-1|BAC04985.1| 590|Homo sapiens protein ( Homo sapiens
cDNA FLJ39929 fis, clone SPLEN2021295. ).
Length = 590
Score = 33.1 bits (72), Expect = 0.88
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 436 SPNIAAGV-HXNRNDEEVGAGDQGLMFGYATDXTXXCMPLTVVLAHKLNQKIAELXRNGE 612
S NI AGV H N++ EE +Q L+ Y LT + K KI + + +
Sbjct: 381 SDNIPAGVTHKNQDIEEKIIEEQSLLSTYELPSCYPTKDLTSIYDIKPFPKITDTKKTED 440
Query: 613 FWWARPDSKTQ 645
+W + KTQ
Sbjct: 441 LYWRQQSLKTQ 451
>AC004129-1|AAP22338.1| 300|Homo sapiens unknown protein.
Length = 300
Score = 33.1 bits (72), Expect = 0.88
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 436 SPNIAAGV-HXNRNDEEVGAGDQGLMFGYATDXTXXCMPLTVVLAHKLNQKIAELXRNGE 612
S NI AGV H N++ EE +Q L+ Y LT + K KI + + +
Sbjct: 91 SDNIPAGVTHKNQDIEEKIIEEQSLLSTYELPSCYPTKDLTSIYDIKPFPKITDTKKTED 150
Query: 613 FWWARPDSKTQ 645
+W + KTQ
Sbjct: 151 LYWRQQSLKTQ 161
>BC028352-1|AAH28352.1| 691|Homo sapiens TBC1 domain family, member
15 protein.
Length = 691
Score = 30.3 bits (65), Expect = 6.2
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +1
Query: 52 WANSKFRMPETSKMNGYAKTNGHSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILXAH 231
W K + P T+ M G++K + +D GS S + P +M D +SDAI
Sbjct: 235 WKKIK-KDPYTATMIGFSKVTNYIFDSLRGS-----DPSTHQRPPSEMADFLSDAIPGLK 288
Query: 232 LNQDPD 249
+NQ +
Sbjct: 289 INQQEE 294
>AY358555-1|AAQ88919.1| 1211|Homo sapiens Patched 2 protein.
Length = 1211
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -1
Query: 515 PNIKPWSPAPTSSSFLXSCTPAAMFGD 435
P+ PWSPA TSS L S P GD
Sbjct: 1178 PDEPPWSPAATSSGNLSSRGPGPATGD 1204
>AK022147-1|BAB13971.1| 674|Homo sapiens protein ( Homo sapiens
cDNA FLJ12085 fis, clone HEMBB1002510, weakly similar to
GYP7 PROTEIN. ).
Length = 674
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 76 PETSKMNGYAKTNGHSYDMEDGSVFLFTSESVGEGHPDKMCDQISDAILXAHLNQDPD 249
P T+ M G++K + +D GS S + P +M D +SDAI +NQ +
Sbjct: 225 PYTATMIGFSKVTNYIFDSLRGS-----DPSTHQRPPSEMADFLSDAIPGLKINQQEE 277
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,074,533
Number of Sequences: 237096
Number of extensions: 2125426
Number of successful extensions: 7744
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7744
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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