Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_K03
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 275 2e-74
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 275 2e-74
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 272 1e-73
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 263 9e-71
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 189 2e-48
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 186 2e-47
U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical pr... 146 2e-35
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 141 4e-34
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 137 6e-33
U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical pr... 77 1e-14
U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical pr... 44 7e-05
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 29 2.2
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 28 5.0
U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical p... 28 6.6
U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical p... 28 6.6
AF016681-20|AAB66167.1| 370|Caenorhabditis elegans Hypothetical... 27 8.7
AF000198-4|AAB53058.2| 175|Caenorhabditis elegans Hypothetical ... 27 8.7
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 275 bits (675), Expect = 2e-74
Identities = 124/167 (74%), Positives = 145/167 (86%)
Frame = +1
Query: 148 FLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 327
FLFTSESV EGHPDKMCDQISDA+L AHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 328 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALXQQSPNIAAGVHXNRNDEEVGAGDQGL 507
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL QQSP IAAGVH +++ ++VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 508 MFGYATDXTXXCMPLTVVLAHKLNQKIAELXRNGEFWWARPDSKTQV 648
MFGYATD T MPLT++L+HKLN+K+ EL R+GE W RPDSKTQV
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQV 172
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 275 bits (675), Expect = 2e-74
Identities = 124/167 (74%), Positives = 145/167 (86%)
Frame = +1
Query: 148 FLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 327
FLFTSESV EGHPDKMCDQISDA+L AHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 328 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALXQQSPNIAAGVHXNRNDEEVGAGDQGL 507
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL QQSP IAAGVH +++ ++VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 508 MFGYATDXTXXCMPLTVVLAHKLNQKIAELXRNGEFWWARPDSKTQV 648
MFGYATD T MPLT++L+HKLN+K+ EL R+GE W RPDSKTQV
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQV 172
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 272 bits (667), Expect = 1e-73
Identities = 124/167 (74%), Positives = 143/167 (85%)
Frame = +1
Query: 148 FLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 327
FLFTSESV EGHPDKMCDQISDA+L AHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 328 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALXQQSPNIAAGVHXNRNDEEVGAGDQGL 507
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL QQSP IAAGVH +++ +VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDIADVGAGDQGI 125
Query: 508 MFGYATDXTXXCMPLTVVLAHKLNQKIAELXRNGEFWWARPDSKTQV 648
MFGYATD T MPLT++L+HKLN K+ EL R+GE W RPDSKTQV
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQV 172
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 263 bits (644), Expect = 9e-71
Identities = 119/169 (70%), Positives = 143/169 (84%)
Frame = +1
Query: 142 SVFLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKA 321
S FLFTSESV EGHPDKMCDQISDA+L AHL QDP+AKVACET+TKTGMV+LCGEITSKA
Sbjct: 3 SKFLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITSKA 62
Query: 322 NVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALXQQSPNIAAGVHXNRNDEEVGAGDQ 501
VDYQ +VR ++ IG+ DSS GFD+KTC+V++AL QQSP IAAGVH N++ E+VGAGDQ
Sbjct: 63 VVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGVHVNKDGEDVGAGDQ 122
Query: 502 GLMFGYATDXTXXCMPLTVVLAHKLNQKIAELXRNGEFWWARPDSKTQV 648
G+MFGYATD T MPLT++L+HK+N ++ +L RNG W RPDSK+QV
Sbjct: 123 GIMFGYATDETEETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKSQV 171
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 189 bits (460), Expect = 2e-48
Identities = 84/121 (69%), Positives = 103/121 (85%)
Frame = +1
Query: 286 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALXQQSPNIAAGVHX 465
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 466 NRNDEEVGAGDQGLMFGYATDXTXXCMPLTVVLAHKLNQKIAELXRNGEFWWARPDSKTQ 645
+++ ++VGAGDQG+MFGYATD T MPLT++L+HKLN+K+ EL R+GE W RPDSKTQ
Sbjct: 61 DKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQ 120
Query: 646 V 648
V
Sbjct: 121 V 121
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 186 bits (452), Expect = 2e-47
Identities = 84/121 (69%), Positives = 101/121 (83%)
Frame = +1
Query: 286 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALXQQSPNIAAGVHX 465
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 466 NRNDEEVGAGDQGLMFGYATDXTXXCMPLTVVLAHKLNQKIAELXRNGEFWWARPDSKTQ 645
+++ +VGAGDQG+MFGYATD T MPLT++L+HKLN K+ EL R+GE W RPDSKTQ
Sbjct: 61 DKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQ 120
Query: 646 V 648
V
Sbjct: 121 V 121
>U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical
protein C06E7.1d protein.
Length = 173
Score = 146 bits (353), Expect = 2e-35
Identities = 66/81 (81%), Positives = 72/81 (88%)
Frame = +1
Query: 148 FLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 327
FLFTSESV EGHPDKMCDQISDA+L AHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 328 DYQKVVRETVKHIGYDDSSKG 390
DYQ +VR +K IGYDDSSKG
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKG 86
Score = 28.7 bits (61), Expect = 3.8
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Frame = +2
Query: 326 WIIKKLCAKRSNILVMMIRPKAL----ITRHAV*CSHXTNNHQTLLLGCMXTEMTRKLGQ 493
W+I LC + S+ L ++I+ ITRHA+ H NNH LL T +
Sbjct: 97 WLIT-LC-QESHFLGLLIKYSIQFQDSITRHAMFLLHSNNNHLKSLLESTWTRIVTMSEP 154
Query: 494 ETRA*CSVMQQMXXXNAC 547
E + C M M C
Sbjct: 155 EIKELCLDMLLMKPKKRC 172
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 141 bits (341), Expect = 4e-34
Identities = 62/94 (65%), Positives = 77/94 (81%)
Frame = +1
Query: 367 GYDDSSKGFDYKTCSVMLALXQQSPNIAAGVHXNRNDEEVGAGDQGLMFGYATDXTXXCM 546
GY D GFDYKTC+V++AL QQSP IAAGVH +++ ++VGAGDQG+MFGYATD T M
Sbjct: 20 GYFDYRNGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAM 79
Query: 547 PLTVVLAHKLNQKIAELXRNGEFWWARPDSKTQV 648
PLT++L+HKLN+K+ EL R+GE W RPDSKTQV
Sbjct: 80 PLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQV 113
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 137 bits (332), Expect = 6e-33
Identities = 62/99 (62%), Positives = 79/99 (79%), Gaps = 3/99 (3%)
Frame = +1
Query: 361 HIGYDDSSK---GFDYKTCSVMLALXQQSPNIAAGVHXNRNDEEVGAGDQGLMFGYATDX 531
H+ D +K GFDYKTC+V++AL QQSP IAAGVH +++ ++VGAGDQG+MFGYATD
Sbjct: 33 HLAQDPHAKVACGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDE 92
Query: 532 TXXCMPLTVVLAHKLNQKIAELXRNGEFWWARPDSKTQV 648
T MPLT++L+HKLN+K+ EL R+GE W RPDSKTQV
Sbjct: 93 TEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQV 131
Score = 80.2 bits (189), Expect = 1e-15
Identities = 46/86 (53%), Positives = 52/86 (60%)
Frame = +1
Query: 148 FLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 327
FLFTSESV EGHPDKMCDQISDA+L AHL QDP AKVAC KT VL+ E S
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACGFDYKTCNVLVALEQQSPEIA 65
Query: 328 DYQKVVRETVKHIGYDDSSKGFDYKT 405
V +++ +G D F Y T
Sbjct: 66 AGVHVDKDS-DDVGAGDQGIMFGYAT 90
>U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical
protein C06E7.1c protein.
Length = 51
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/39 (87%), Positives = 35/39 (89%)
Frame = +1
Query: 148 FLFTSESVGEGHPDKMCDQISDAILXAHLNQDPDAKVAC 264
FLFTSESV EGHPDKMCDQISDA+L AHL QDP AKVAC
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44
>U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical
protein C06E7.1b protein.
Length = 84
Score = 44.4 bits (100), Expect = 7e-05
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1
Query: 148 FLFTSESVGEGHPDKMCDQ 204
FLFTSESV EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 214 AILXAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 354
A + ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 214 AILXAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 354
A + ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 214 AILXAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 354
A + ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +2
Query: 314 PKLTWIIKKLCAKRSNIL---VMMIRPKALITRH 406
PK+ W ++K+C K+ +I + I P+ L+T H
Sbjct: 253 PKIVWHLEKMCNKKEDISRGNPVSIPPQRLLTHH 286
>U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical
protein F08F8.1 protein.
Length = 352
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -3
Query: 387 FGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 265
FGR D NF H FG HH GF +GF
Sbjct: 149 FGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 189
>U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical
protein F08F8.5 protein.
Length = 281
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -3
Query: 387 FGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 265
FGR D NF H FG HH GF +GF
Sbjct: 223 FGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 263
>AF016681-20|AAB66167.1| 370|Caenorhabditis elegans Hypothetical
protein F22E5.1 protein.
Length = 370
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 278 KPVWCFCVAKSHPKLTWIIKKLCAKRSNILVMMIRPKALITR 403
KP+ + K HP + W+ L K+ N++ +M++ A T+
Sbjct: 197 KPLLLAELLKEHPNIWWMDAHLSVKKPNMVELMMKEVAEKTK 238
>AF000198-4|AAB53058.2| 175|Caenorhabditis elegans Hypothetical
protein T28F2.2 protein.
Length = 175
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +2
Query: 323 TWIIKKLCAKRSNILVMMIRPKALITRHAV*CSH 424
+W+++++C SN+ V+ + H V C H
Sbjct: 5 SWLLEEICTNFSNLTVLKFKELCNRASHLVLCGH 38
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,846,457
Number of Sequences: 27780
Number of extensions: 338969
Number of successful extensions: 839
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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