Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_J21
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21321-2|AAG00050.1|  489|Caenorhabditis elegans Cytochrome p450...    41   9e-04
Z50742-2|CAA90616.1|  491|Caenorhabditis elegans Hypothetical pr...    33   0.13 
Z70306-3|CAA94325.1|  318|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AC025715-2|AAK68447.2|  439|Caenorhabditis elegans Hypothetical ...    27   8.7  

>U21321-2|AAG00050.1|  489|Caenorhabditis elegans Cytochrome p450
           family protein 44A1 protein.
          Length = 489

 Score = 40.7 bits (91), Expect = 9e-04
 Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
 Frame = +2

Query: 113 IRSAVRS--RNSNRC--SMSTKPHKSLRTIXXMPHKKSLPIIGT----KFDLFS-AGGGK 265
           +R ++R+   N  +C  S ++ P+   RT   +P  + +P+IG     K+ + S A   +
Sbjct: 1   MRRSIRNLAENVEKCPYSPTSSPNTPPRTFSEIPGPREIPVIGNIGYFKYAVKSDAKTIE 60

Query: 266 NLHKYIDMRHKQLGPIFYXRL-TGKTKLVFISDPTHMKSLFLNLXXKYPAHI-LPEPWVL 439
           N +++++  +K+ G I    L  G+  +V I DP  ++++ L    K P  + L E    
Sbjct: 61  NYNQHLEEMYKKYGKIVKENLGFGRKYVVHIFDPADVQTV-LAADGKTPFIVPLQETTQK 119

Query: 440 YEKLYGSKRGLFFMDGXDWLINRRIMNKHLLRXXS 544
           Y ++ G   GL  ++G +W   R  +   ++R  S
Sbjct: 120 YREMKGMNPGLGNLNGPEWYRLRSSVQHAMMRPQS 154


>Z50742-2|CAA90616.1|  491|Caenorhabditis elegans Hypothetical
           protein K09A11.2 protein.
          Length = 491

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
 Frame = +2

Query: 266 NLHKYIDMRHKQLGPIFYXRLTGKTKLVFISDPTHMKSLFLNL--XXKYPAHILPEPWVL 439
           N+ KY D+  K  GP F   +      + ++D  H+K  F+N      Y AH  PE  + 
Sbjct: 46  NVQKYFDVLSKTYGPCFTIWI--PFPAIVLTDYEHIKDAFVNQGDTFTYRAHRSPETLLP 103

Query: 440 YEKLYGSKRGLFFMDGXDWLINRRIMNKHL 529
                    G+   DG  W + RR   K L
Sbjct: 104 VH----DHTGILASDGDHWRLQRRTSLKIL 129


>Z70306-3|CAA94325.1|  318|Caenorhabditis elegans Hypothetical
           protein C06G8.4 protein.
          Length = 318

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +3

Query: 144 IDVQCQLSLINLYVPXMXCHIRNHYQS*EQNLTYFLQVEEKTYTNISTCVT 296
           I +   L+L+  ++    C++   +QS +   TY L +   T TN+  CVT
Sbjct: 9   IGINSILTLLGCFINLFLCYLAI-FQSPKAIRTYSLVLINITLTNVGACVT 58


>AC025715-2|AAK68447.2|  439|Caenorhabditis elegans Hypothetical
           protein Y38F2AR.6 protein.
          Length = 439

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -1

Query: 115 NGRHRRETMHF*IKENPDISNHFNKR 38
           +G+HR    H  I+ENP +++ FN++
Sbjct: 366 HGQHRTLKKHNQIEENPKVADEFNEK 391


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,566,590
Number of Sequences: 27780
Number of extensions: 283387
Number of successful extensions: 601
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)