Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_J17
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051574-1|AAK92998.1|  339|Drosophila melanogaster GH22160p pro...    37   0.028
AE014297-3625|AAF56335.1|  339|Drosophila melanogaster CG5805-PA...    37   0.028

>AY051574-1|AAK92998.1|  339|Drosophila melanogaster GH22160p
           protein.
          Length = 339

 Score = 36.7 bits (81), Expect = 0.028
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = +1

Query: 580 ITTIXWSMMDKSKFFPLYTMSSFT 651
           I TI W MM+K+KFFPL  +SSF+
Sbjct: 29  IRTIEWDMMNKTKFFPLSMLSSFS 52


>AE014297-3625|AAF56335.1|  339|Drosophila melanogaster CG5805-PA
           protein.
          Length = 339

 Score = 36.7 bits (81), Expect = 0.028
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = +1

Query: 580 ITTIXWSMMDKSKFFPLYTMSSFT 651
           I TI W MM+K+KFFPL  +SSF+
Sbjct: 29  IRTIEWDMMNKTKFFPLSMLSSFS 52


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,686,565
Number of Sequences: 53049
Number of extensions: 306643
Number of successful extensions: 454
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)