Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_J10
(653 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 285 7e-77
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 285 7e-77
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 285 7e-77
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 285 9e-77
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 285 9e-77
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 285 9e-77
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 285 9e-77
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 285 9e-77
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 280 3e-75
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 162 1e-39
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 42 0.002
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 41 0.003
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 41 0.003
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 39 0.014
AK131548-1|BAD18682.1| 243|Homo sapiens protein ( Homo sapiens ... 32 2.1
AB209603-1|BAD92840.1| 337|Homo sapiens amyloid beta (A4) precu... 32 2.1
AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens ... 30 6.3
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 285 bits (700), Expect = 7e-77
Identities = 129/159 (81%), Positives = 143/159 (89%)
Frame = +2
Query: 176 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 355
+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+P
Sbjct: 44 IVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLP 103
Query: 356 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNR 535
VG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR
Sbjct: 104 VGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANR 163
Query: 536 GMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGV 652
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGV
Sbjct: 164 AVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 69.3 bits (162), Expect = 1e-11
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIK 171
MGRVIR QRKGAGSVF +H K RKGA +LR++ +AERHGYIK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIK 42
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 285 bits (700), Expect = 7e-77
Identities = 129/159 (81%), Positives = 143/159 (89%)
Frame = +2
Query: 176 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 355
+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+P
Sbjct: 44 IVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLP 103
Query: 356 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNR 535
VG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR
Sbjct: 104 VGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANR 163
Query: 536 GMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGV 652
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGV
Sbjct: 164 AVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 69.3 bits (162), Expect = 1e-11
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIK 171
MGRVIR QRKGAGSVF +H K RKGA +LR++ +AERHGYIK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIK 42
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 285 bits (700), Expect = 7e-77
Identities = 129/159 (81%), Positives = 143/159 (89%)
Frame = +2
Query: 176 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 355
+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+P
Sbjct: 44 IVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLP 103
Query: 356 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNR 535
VG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR
Sbjct: 104 VGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANR 163
Query: 536 GMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGV 652
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGV
Sbjct: 164 AVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 69.3 bits (162), Expect = 1e-11
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIK 171
MGRVIR QRKGAGSVF +H K RKGA +LR++ +AERHGYIK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIK 42
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 285 bits (699), Expect = 9e-77
Identities = 128/159 (80%), Positives = 143/159 (89%)
Frame = +2
Query: 176 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 355
+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+P
Sbjct: 44 IVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLP 103
Query: 356 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNR 535
VG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR
Sbjct: 104 VGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANR 163
Query: 536 GMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGV 652
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGV
Sbjct: 164 AVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 69.3 bits (162), Expect = 1e-11
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIK 171
MGRVIR QRKGAGSVF +H K RKGA +LR++ +AERHGYIK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIK 42
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 285 bits (699), Expect = 9e-77
Identities = 128/159 (80%), Positives = 143/159 (89%)
Frame = +2
Query: 176 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 355
+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+P
Sbjct: 44 IVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLP 103
Query: 356 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNR 535
VG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR
Sbjct: 104 VGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANR 163
Query: 536 GMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGV 652
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGV
Sbjct: 164 AVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 69.3 bits (162), Expect = 1e-11
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIK 171
MGRVIR QRKGAGSVF +H K RKGA +LR++ +AERHGYIK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIK 42
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 285 bits (699), Expect = 9e-77
Identities = 128/159 (80%), Positives = 143/159 (89%)
Frame = +2
Query: 176 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 355
+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+P
Sbjct: 44 IVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLP 103
Query: 356 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNR 535
VG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR
Sbjct: 104 VGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANR 163
Query: 536 GMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGV 652
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGV
Sbjct: 164 AVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 69.3 bits (162), Expect = 1e-11
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIK 171
MGRVIR QRKGAGSVF +H K RKGA +LR++ +AERHGYIK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIK 42
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 285 bits (699), Expect = 9e-77
Identities = 128/159 (80%), Positives = 143/159 (89%)
Frame = +2
Query: 176 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 355
+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+P
Sbjct: 44 IVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLP 103
Query: 356 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNR 535
VG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR
Sbjct: 104 VGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANR 163
Query: 536 GMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGV 652
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGV
Sbjct: 164 AVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 69.3 bits (162), Expect = 1e-11
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIK 171
MGRVIR QRKGAGSVF +H K RKGA +LR++ +AERHGYIK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIK 42
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 285 bits (699), Expect = 9e-77
Identities = 128/159 (80%), Positives = 143/159 (89%)
Frame = +2
Query: 176 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 355
+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+P
Sbjct: 44 IVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLP 103
Query: 356 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNR 535
VG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR
Sbjct: 104 VGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANR 163
Query: 536 GMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGV 652
+VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGV
Sbjct: 164 AVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 69.3 bits (162), Expect = 1e-11
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +1
Query: 46 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIK 171
MGRVIR QRKGAGSVF +H K RKGA +LR++ +AERHGYIK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIK 42
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 280 bits (687), Expect = 3e-75
Identities = 126/156 (80%), Positives = 140/156 (89%)
Frame = +2
Query: 185 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGA 364
DIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGT 60
Query: 365 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMV 544
MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +V
Sbjct: 61 MPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVV 120
Query: 545 GIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGV 652
G+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGV
Sbjct: 121 GVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGV 156
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 162 bits (393), Expect = 1e-39
Identities = 73/91 (80%), Positives = 81/91 (89%)
Frame = +2
Query: 176 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 355
+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+P
Sbjct: 40 IVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLP 99
Query: 356 VGAMPEGTIVCNLEEKMGDRGRLARASGNFA 448
VG MPEGTIVC LEEK GDRG+LARASGN+A
Sbjct: 100 VGTMPEGTIVCCLEEKPGDRGKLARASGNYA 130
Score = 61.3 bits (142), Expect = 3e-09
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +1
Query: 58 IRAQRKGAGSVFVSHTKKRKGAPKLRSLHYAERHGYIK 171
IR QRKGAGSVF +H K RKGA +LR++ +AERHGYIK
Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIK 38
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 41.9 bits (94), Expect = 0.002
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Frame = +2
Query: 179 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGKKATL-EVG 343
V + +DP R A +A+V +RK IA E + G + + G+ A G
Sbjct: 126 VIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREG 179
Query: 344 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 523
+ P+GA+P GT++ N+E + G + RA+G ++ + ++LPS + +
Sbjct: 180 DAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGHSIIQLPSKRQMQVL 237
Query: 524 SSNRGMVGIVAGGGRIDKPILKAGR 598
+ VG V+ + I KAGR
Sbjct: 238 ETCVATVGRVSNVDHNKRVIGKAGR 262
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 41.1 bits (92), Expect = 0.003
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Frame = +2
Query: 179 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGKKATL-EVG 343
V + +DP R A +A+V +RK IA E + G + + G+ A G
Sbjct: 126 VIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREG 179
Query: 344 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 523
+ P+GA+P GT++ N+E + G + RA+G ++ ++LPS + +
Sbjct: 180 DAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVL 237
Query: 524 SSNRGMVGIVAGGGRIDKPILKAGR 598
+ VG V+ + I KAGR
Sbjct: 238 ETCVATVGRVSNVDHNKRVIGKAGR 262
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 41.1 bits (92), Expect = 0.003
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Frame = +2
Query: 179 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGKKATL-EVG 343
V + +DP R A +A+V +RK IA E + G + + G+ A G
Sbjct: 126 VIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREG 179
Query: 344 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 523
+ P+GA+P GT++ N+E + G + RA+G ++ ++LPS + +
Sbjct: 180 DAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVL 237
Query: 524 SSNRGMVGIVAGGGRIDKPILKAGR 598
+ VG V+ + I KAGR
Sbjct: 238 ETCVATVGRVSNVDHNKRVIGKAGR 262
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 39.1 bits (87), Expect = 0.014
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Frame = +2
Query: 257 TRKELFIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGR 421
+RK IA E + G + + G+ A G+ P+GA+P GT++ N+E + G +
Sbjct: 143 SRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQ 202
Query: 422 LARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 598
RA+G ++ ++LPS + + + VG V+ + I KAGR
Sbjct: 203 YIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 259
>AK131548-1|BAD18682.1| 243|Homo sapiens protein ( Homo sapiens
cDNA FLJ16784 fis, clone CTONG2003764, highly similar
to Protein kinase C, delta type (EC 2.7.1.-). ).
Length = 243
Score = 31.9 bits (69), Expect = 2.1
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = +1
Query: 103 TKKRKGAPKLRSLHYAERHGYIKASC*GYNP*PW*RCTFGCCTLPRSIQVQDKEGALHCS 282
T R+GA K +HY + H +I A+ G + TF C + +K+G C
Sbjct: 110 TMNRRGAIKQAKIHYIKNHEFI-ATFFG-------QPTF-CSVCKDFVWGLNKQG-YKCR 159
Query: 283 RRALHRPIC 309
R+ LHRP+C
Sbjct: 160 RKCLHRPVC 168
>AB209603-1|BAD92840.1| 337|Homo sapiens amyloid beta (A4)
precursor protein-binding, family A, member 3 variant
protein.
Length = 337
Score = 31.9 bits (69), Expect = 2.1
Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 4/97 (4%)
Frame = +1
Query: 70 RKGAGSVFVSHT--KKRKGAPKLRSLH--YAERHGYIKASC*GYNP*PW*RCTFGCCTLP 237
R A SV S + LRS+ + RH +SC +P P RC C LP
Sbjct: 227 RSAASSVVASPSVGASASATASLRSMGRVWWPRHTPASSSC---SPRPMARCISRRCQLP 283
Query: 238 RSIQVQDKEGALHCSRRALHRPICLLWKESNS*SWKC 348
+Q + C P+CL + SW C
Sbjct: 284 HIASLQARSSPCTCDHLIPCLPLCLRLHGPGAPSWAC 320
>AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens
cDNA FLJ42789 fis, clone BRAWH3007221. ).
Length = 163
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = -3
Query: 627 LRLTLYLWYAL-PAFKIGLSIRPPPATIPTMPL 532
L LT +L+ A P F++ +S+ PPP ++P P+
Sbjct: 87 LFLTHFLYLAASPCFRLSVSLFPPPLSLPRSPI 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,639,899
Number of Sequences: 237096
Number of extensions: 2414907
Number of successful extensions: 5448
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5446
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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