Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_J06
         (357 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   1.6  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   2.9  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    20   6.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    20   6.6  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = -2

Query: 257 VIRSRTLMPSKALANRPGQYGSTXTAAAFKMVEIFSPVTATSSSSQDESRVNT 99
           VI + T  PS  L+NR G+      A+         P T+T++ +   ++  T
Sbjct: 127 VISTNTSPPSPILSNRFGENEEADAASNVISSTPLPPTTSTTTRTTLTTKFTT 179


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 133 DVAVTGEKISTILKAAAVXVEPYWPGLFAKAL 228
           +V +  EKI  +L+       P  PG FAK L
Sbjct: 334 EVEMLREKIYGVLEEYTRTTHPNEPGRFAKLL 365


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 246 TDIDAFQGFGEQTWPI 199
           TD+D F+G     WP+
Sbjct: 515 TDLDDFKGVCGMKWPL 530


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +2

Query: 98  MCLLCSHPGWMMMLP 142
           + L+C   GWM + P
Sbjct: 6   LSLICKFGGWMGLTP 20


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = +1

Query: 127 DDDVAVTGEKISTILKAAAVXVEPYWPGLFAKALEGINVRDLIT 258
           + D+A+TG+   +I +   +    Y+  L    L  I    L T
Sbjct: 373 NSDIAITGKNFFSITRGLILSFVDYFVFLLCSILVNIAFIKLAT 416


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,621
Number of Sequences: 336
Number of extensions: 1453
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)