Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_J06
         (357 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M17886-1|AAA36471.1|  114|Homo sapiens protein ( Human acidic ri...    78   7e-15
CR450339-1|CAG29335.1|  114|Homo sapiens RPLP1 protein.                78   7e-15
BC007590-1|AAH07590.1|  114|Homo sapiens ribosomal protein, larg...    78   7e-15
BC003369-1|AAH03369.1|  114|Homo sapiens ribosomal protein, larg...    78   7e-15
AY303789-1|AAP68820.1|  113|Homo sapiens acidic ribosomal phosph...    78   7e-15
AB061836-1|BAB79474.1|  114|Homo sapiens ribosomal protein P1 pr...    78   7e-15
CR542209-1|CAG47005.1|  114|Homo sapiens RPLP1 protein.                76   3e-14

>M17886-1|AAA36471.1|  114|Homo sapiens protein ( Human acidic
           ribosomal phosphoprotein P1 mRNA, complete cds. ).
          Length = 114

 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 35/57 (61%), Positives = 45/57 (78%)
 Frame = +1

Query: 127 DDDVAVTGEKISTILKAAAVXVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 297
           DD+V VT +KI+ ++KAA V VEP+WPGLFAKAL  +N+  LI N+G+G G APAAG
Sbjct: 18  DDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG-GPAPAAG 73


>CR450339-1|CAG29335.1|  114|Homo sapiens RPLP1 protein.
          Length = 114

 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 35/57 (61%), Positives = 45/57 (78%)
 Frame = +1

Query: 127 DDDVAVTGEKISTILKAAAVXVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 297
           DD+V VT +KI+ ++KAA V VEP+WPGLFAKAL  +N+  LI N+G+G G APAAG
Sbjct: 18  DDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG-GPAPAAG 73


>BC007590-1|AAH07590.1|  114|Homo sapiens ribosomal protein, large,
           P1 protein.
          Length = 114

 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 35/57 (61%), Positives = 45/57 (78%)
 Frame = +1

Query: 127 DDDVAVTGEKISTILKAAAVXVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 297
           DD+V VT +KI+ ++KAA V VEP+WPGLFAKAL  +N+  LI N+G+G G APAAG
Sbjct: 18  DDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG-GPAPAAG 73


>BC003369-1|AAH03369.1|  114|Homo sapiens ribosomal protein, large,
           P1 protein.
          Length = 114

 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 35/57 (61%), Positives = 45/57 (78%)
 Frame = +1

Query: 127 DDDVAVTGEKISTILKAAAVXVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 297
           DD+V VT +KI+ ++KAA V VEP+WPGLFAKAL  +N+  LI N+G+G G APAAG
Sbjct: 18  DDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG-GPAPAAG 73


>AY303789-1|AAP68820.1|  113|Homo sapiens acidic ribosomal
           phosphoprotein P1 protein.
          Length = 113

 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 35/57 (61%), Positives = 45/57 (78%)
 Frame = +1

Query: 127 DDDVAVTGEKISTILKAAAVXVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 297
           DD+V VT +KI+ ++KAA V VEP+WPGLFAKAL  +N+  LI N+G+G G APAAG
Sbjct: 18  DDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG-GPAPAAG 73


>AB061836-1|BAB79474.1|  114|Homo sapiens ribosomal protein P1
           protein.
          Length = 114

 Score = 78.2 bits (184), Expect = 7e-15
 Identities = 35/57 (61%), Positives = 45/57 (78%)
 Frame = +1

Query: 127 DDDVAVTGEKISTILKAAAVXVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 297
           DD+V VT +KI+ ++KAA V VEP+WPGLFAKAL  +N+  LI N+G+G G APAAG
Sbjct: 18  DDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAG-GPAPAAG 73


>CR542209-1|CAG47005.1|  114|Homo sapiens RPLP1 protein.
          Length = 114

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 34/57 (59%), Positives = 45/57 (78%)
 Frame = +1

Query: 127 DDDVAVTGEKISTILKAAAVXVEPYWPGLFAKALEGINVRDLITNIGSGVGAAPAAG 297
           DD+V VT +KI+ ++KAA V VEP+WPGLFAKAL  +N+  LI ++G+G G APAAG
Sbjct: 18  DDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICDVGAG-GPAPAAG 73


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,873,637
Number of Sequences: 237096
Number of extensions: 910480
Number of successful extensions: 1470
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1470
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)