Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_J04
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical pr... 191 4e-49
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 30 1.6
AF067610-1|AAC17538.2| 696|Caenorhabditis elegans Hypothetical ... 29 3.8
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z99284-2|CAL49452.1| 546|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z92796-7|CAB63230.2| 546|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z69788-1|CAA93646.1| 894|Caenorhabditis elegans Hypothetical pr... 28 6.6
U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical p... 27 8.7
>Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical
protein F54C9.5 protein.
Length = 293
Score = 191 bits (465), Expect = 4e-49
Identities = 93/160 (58%), Positives = 110/160 (68%), Gaps = 1/160 (0%)
Frame = +1
Query: 175 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 354
VQDKNKYNTPKYRLIVR++NKDV Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAA
Sbjct: 38 VQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAA 97
Query: 355 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV-DNGPXAFXCYLDVGLARTTTG 531
AY+TG +YNVE D P F LD+GLARTTTG
Sbjct: 98 AYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEEEGDRAP--FKAVLDIGLARTTTG 155
Query: 532 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSKKFNAEVHR 651
+++F MKG DGG+NVPHS RF G+D SK++NAE HR
Sbjct: 156 SKIFAVMKGVADGGINVPHSESRFFGFDQESKEYNAEAHR 195
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVK 118
MG VKV+KNK YFKRYQVK
Sbjct: 1 MGLVKVIKNKAYFKRYQVK 19
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 126 RRREGKTDYYARKRL 170
RRREGKTDYYARKRL
Sbjct: 22 RRREGKTDYYARKRL 36
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 298 KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 185
+QR ++ + + P HLC R+++ DI CYI CS
Sbjct: 980 RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 298 KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 185
+QR ++ + + P HLC R+++ DI CYI CS
Sbjct: 980 RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018
>AF067610-1|AAC17538.2| 696|Caenorhabditis elegans Hypothetical
protein F41A4.1 protein.
Length = 696
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +1
Query: 454 NVEPVDNGPXAFXCYL-DVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAXSKK 630
N EP++ F C+L TT+G+R G + L + ++FPG +
Sbjct: 68 NAEPIEKKNGGFNCHLHSKSPVLTTSGSRTVGTKTCLENKCLKRSFAFEKFPGRSLVNSS 127
Query: 631 F 633
F
Sbjct: 128 F 128
>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
protein K10G4.5 protein.
Length = 1251
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 193 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 312
YN P+YR +++L K C+ + GD++ +CA + EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588
>Z99284-2|CAL49452.1| 546|Caenorhabditis elegans Hypothetical
protein H25K10.1 protein.
Length = 546
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = -2
Query: 282 MVTFNPRVGHLACYIFVGETHNQTIFRCVIFVLVLNKRGVYEHNNQFSLHDASLNF 115
M P ++ +F G + +IF +I + K GVY N +S + +F
Sbjct: 173 MNVIEPFAAYVPYMVFAGNHESNSIFNHIIHRFTMPKNGVYNDNLFWSFDFGNAHF 228
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 340 SDQPSHHNVATHVNKQRTQYGHLQSESRP 254
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical
protein T23B5.3b protein.
Length = 540
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 340 SDQPSHHNVATHVNKQRTQYGHLQSESRP 254
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z92796-7|CAB63230.2| 546|Caenorhabditis elegans Hypothetical
protein H25K10.1 protein.
Length = 546
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = -2
Query: 282 MVTFNPRVGHLACYIFVGETHNQTIFRCVIFVLVLNKRGVYEHNNQFSLHDASLNF 115
M P ++ +F G + +IF +I + K GVY N +S + +F
Sbjct: 173 MNVIEPFAAYVPYMVFAGNHESNSIFNHIIHRFTMPKNGVYNDNLFWSFDFGNAHF 228
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 340 SDQPSHHNVATHVNKQRTQYGHLQSESRP 254
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z69788-1|CAA93646.1| 894|Caenorhabditis elegans Hypothetical
protein F09A5.2 protein.
Length = 894
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 112 SKIQRGVVKGKLIIMLVNASLVQDKNKYNTPKYRLIVR 225
+ + +G+VKGK+ +++VN SL N Y ++
Sbjct: 476 ANVYKGIVKGKIPLLVVNNSLNMTVESENNGHYEAAIK 513
>U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical
protein F45F2.1 protein.
Length = 475
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = -2
Query: 210 IFRCVIFVLVLNKRGVYEHNNQFSLHDASLNFTWYLLKYC 91
+F+C+ ++LN+ V N H+ ++N + L+ C
Sbjct: 247 VFQCLFKHIILNQEFVISPNRDLMPHEKNINIIFLLVGVC 286
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,437,301
Number of Sequences: 27780
Number of extensions: 291200
Number of successful extensions: 738
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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