Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_J02
         (400 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC020651-1|AAH20651.1|  170|Homo sapiens mitochondrial ribosomal...    50   3e-06
M95712-1|AAA35609.2|  766|Homo sapiens B-raf protein protein.          31   1.9  
BC112079-1|AAI12080.1|  766|Homo sapiens v-raf murine sarcoma vi...    31   1.9  
BC101757-1|AAI01758.1|  766|Homo sapiens v-raf murine sarcoma vi...    31   1.9  
AC006344-3|AAD43193.1|  651|Homo sapiens WUGSC:H_DJ0726N20.3 pro...    31   1.9  

>BC020651-1|AAH20651.1|  170|Homo sapiens mitochondrial ribosomal
           protein L35 protein.
          Length = 170

 Score = 50.0 bits (114), Expect = 3e-06
 Identities = 23/31 (74%), Positives = 25/31 (80%)
 Frame = +2

Query: 296 PTRSVTKFSLKKGKRKTVKAVIKRFFRLHWG 388
           P RS+T FS +KGKRKTVKAVI RF RLH G
Sbjct: 90  PVRSLTYFSARKGKRKTVKAVIDRFLRLHCG 120


>M95712-1|AAA35609.2|  766|Homo sapiens B-raf protein protein.
          Length = 766

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +3

Query: 39  VQLLHKICLNYNIFVKMLRFLTYCCSLCS--MSSGFALTQCNYAYY*RCQTFLSL 197
           V++L  + L  + FV+   F    C  C   +  GF    C Y ++ RC T + L
Sbjct: 224 VEVLENVPLTTHNFVRKTFFTLAFCDFCRKLLFQGFRCQTCGYKFHQRCSTEVPL 278


>BC112079-1|AAI12080.1|  766|Homo sapiens v-raf murine sarcoma viral
           oncogene homolog B1 protein.
          Length = 766

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +3

Query: 39  VQLLHKICLNYNIFVKMLRFLTYCCSLCS--MSSGFALTQCNYAYY*RCQTFLSL 197
           V++L  + L  + FV+   F    C  C   +  GF    C Y ++ RC T + L
Sbjct: 224 VEVLENVPLTTHNFVRKTFFTLAFCDFCRKLLFQGFRCQTCGYKFHQRCSTEVPL 278


>BC101757-1|AAI01758.1|  766|Homo sapiens v-raf murine sarcoma viral
           oncogene homolog B1 protein.
          Length = 766

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +3

Query: 39  VQLLHKICLNYNIFVKMLRFLTYCCSLCS--MSSGFALTQCNYAYY*RCQTFLSL 197
           V++L  + L  + FV+   F    C  C   +  GF    C Y ++ RC T + L
Sbjct: 224 VEVLENVPLTTHNFVRKTFFTLAFCDFCRKLLFQGFRCQTCGYKFHQRCSTEVPL 278


>AC006344-3|AAD43193.1|  651|Homo sapiens WUGSC:H_DJ0726N20.3
           protein.
          Length = 651

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +3

Query: 39  VQLLHKICLNYNIFVKMLRFLTYCCSLCS--MSSGFALTQCNYAYY*RCQTFLSL 197
           V++L  + L  + FV+   F    C  C   +  GF    C Y ++ RC T + L
Sbjct: 69  VEVLENVPLTTHNFVRKTFFTLAFCDFCRKLLFQGFRCQTCGYKFHQRCSTEVPL 123


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,248,097
Number of Sequences: 237096
Number of extensions: 898622
Number of successful extensions: 1402
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1402
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)