Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_I24
         (595 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          23   1.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   1.7  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   3.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   5.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.1  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.1  

>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 16/47 (34%), Positives = 19/47 (40%)
 Frame = -2

Query: 378 SSDMAESXFRSSQIITLFGG*TGVLPPPTKAI*LHRNNISTYERPPT 238
           S D   S   S+ I T FGG    +PP  K   LH +       P T
Sbjct: 71  SGDSPVSSHSSNGIHTGFGGSIITIPPTRKLPPLHPHTAMVTHLPQT 117


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 483  SNWG*AVKVYTFINCSRTTTIRSLRNFTAFTGL 385
            SN+  AVK   F+N +   T  S+ +F   TGL
Sbjct: 902  SNYIEAVKEGKFMNVNMLDTYESVHSFPTETGL 934


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -3

Query: 275 TGITFPRTKDRQQQSSAVLSLVRGHY*RHGNHFPFHKR 162
           +G+T    +  + + S V +L  G     GNH PFH++
Sbjct: 113 SGLTQQADQTDRDELSHVRALAAG-----GNHLPFHEK 145


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 147 WLKPTYKSP 121
           WL P YKSP
Sbjct: 70  WLSPIYKSP 78


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 314 VYPPNKVIIWDD 349
           +YPPNK+  W++
Sbjct: 94  LYPPNKLQQWNE 105


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 314 VYPPNKVIIWDD 349
           +YPPNK+  W++
Sbjct: 109 LYPPNKLQQWNE 120


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,714
Number of Sequences: 438
Number of extensions: 3612
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)