Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_I21
(513 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P25398 Cluster: 40S ribosomal protein S12; n=129; Eukar... 182 6e-45
UniRef50_Q201W7 Cluster: 40S ribosomal protein S12; n=1; Acyrtho... 156 3e-37
UniRef50_Q9SKZ3 Cluster: 40S ribosomal protein S12-2; n=3; Magno... 146 3e-34
UniRef50_A2YI73 Cluster: 40S ribosomal protein S12; n=5; Oryza s... 141 7e-33
UniRef50_Q5B5V7 Cluster: 40S ribosomal protein S12; n=1; Emerice... 116 8e-33
UniRef50_Q54PX9 Cluster: 40S ribosomal protein S12; n=1; Dictyos... 139 3e-32
UniRef50_Q5DE28 Cluster: 40S ribosomal protein S12; n=2; Platyhe... 134 1e-30
UniRef50_Q5CFW0 Cluster: 40S ribosomal protein S12; n=4; Apicomp... 121 1e-26
UniRef50_P48589 Cluster: 40S ribosomal protein S12; n=13; Saccha... 116 3e-25
UniRef50_Q03253 Cluster: 40S ribosomal protein S12; n=10; Trypan... 111 7e-24
UniRef50_O97249 Cluster: 40S ribosomal protein S12; n=5; Plasmod... 111 9e-24
UniRef50_A7AM93 Cluster: 40S ribosomal protein S12, putative; n=... 98 1e-19
UniRef50_UPI0000D633F9 Cluster: UPI0000D633F9 related cluster; n... 82 8e-15
UniRef50_A0EEB1 Cluster: 40S ribosomal protein S12; n=7; Paramec... 80 3e-14
UniRef50_Q22W26 Cluster: 40S ribosomal protein S12; n=1; Tetrahy... 76 5e-13
UniRef50_UPI00004982F0 Cluster: 40S ribosomal protein S12; n=3; ... 71 2e-11
UniRef50_Q8IGF9 Cluster: RH29995p; n=2; Drosophila melanogaster|... 69 6e-11
UniRef50_Q7R1B2 Cluster: GLP_306_61647_62024; n=1; Giardia lambl... 60 4e-08
UniRef50_Q017M6 Cluster: Homology to unknown gene; n=1; Ostreoco... 56 6e-07
UniRef50_A2E257 Cluster: Ribosomal protein L7Ae, putative; n=5; ... 55 1e-06
UniRef50_Q3LWI8 Cluster: Ribosomal protein S12; n=1; Bigelowiell... 49 7e-05
UniRef50_A0C845 Cluster: Chromosome undetermined scaffold_157, w... 47 2e-04
UniRef50_UPI0000D56A00 Cluster: PREDICTED: similar to CG11086-PA... 46 4e-04
UniRef50_A7T0U1 Cluster: Predicted protein; n=1; Nematostella ve... 45 9e-04
UniRef50_Q3SAE1 Cluster: Ribosomal protein L7A; n=2; Naegleria g... 44 0.002
UniRef50_Q8ZTA5 Cluster: 50S ribosomal protein L7Ae; n=7; Archae... 43 0.004
UniRef50_P24522 Cluster: Growth arrest and DNA-damage-inducible ... 43 0.004
UniRef50_Q8SSK9 Cluster: 40S RIBOSOMAL PROTEIN S12; n=1; Encepha... 42 0.008
UniRef50_P55858 Cluster: 50S ribosomal protein L7Ae; n=44; Archa... 42 0.008
UniRef50_UPI000059FDC3 Cluster: PREDICTED: similar to growth arr... 41 0.019
UniRef50_Q6NUV6 Cluster: Zgc:85869; n=5; Euteleostomi|Rep: Zgc:8... 41 0.019
UniRef50_Q9Z9M0 Cluster: Putative ribosomal protein L7Ae-like; n... 40 0.025
UniRef50_Q7QJT5 Cluster: ENSANGP00000021535; n=2; Culicidae|Rep:... 39 0.058
UniRef50_Q3SAD9 Cluster: Ribosomal protein L7A; n=2; Spironucleu... 39 0.058
UniRef50_UPI00006CA9C7 Cluster: Ribosomal protein L7Ae containin... 39 0.077
UniRef50_Q4QIP1 Cluster: 60S ribosomal protein L7a, putative; n=... 39 0.077
UniRef50_A4S6A0 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 38 0.10
UniRef50_A0UZZ9 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 38 0.13
UniRef50_P32495 Cluster: H/ACA ribonucleoprotein complex subunit... 37 0.31
UniRef50_Q9U3Z7 Cluster: NHP2-like protein; n=71; Eukaryota|Rep:... 36 0.41
UniRef50_Q9XXD4 Cluster: Putative H/ACA ribonucleoprotein comple... 36 0.54
UniRef50_Q9AW38 Cluster: SNU13 snRNP subunit homolog; n=1; Guill... 34 1.7
UniRef50_A6MZZ6 Cluster: H/ACA ribonucleoprotein complex subunit... 34 2.2
UniRef50_A2E3E3 Cluster: 60S ribosomal protein L7a, putative; n=... 34 2.2
UniRef50_UPI000155BC7D Cluster: PREDICTED: similar to zonadhesin... 33 3.8
UniRef50_A0PXU0 Cluster: Ribosomal protein L7AE family, putative... 33 3.8
UniRef50_UPI00006D0064 Cluster: Ribosomal protein L7Ae containin... 33 5.0
UniRef50_Q3W1D8 Cluster: Catalytic domain of components of vario... 33 5.0
UniRef50_A3RPQ3 Cluster: Arginase; n=4; Ralstonia|Rep: Arginase ... 33 5.0
UniRef50_Q97P44 Cluster: Putative trans-acting regulator SP_1800... 32 8.8
>UniRef50_P25398 Cluster: 40S ribosomal protein S12; n=129;
Eukaryota|Rep: 40S ribosomal protein S12 - Homo sapiens
(Human)
Length = 132
Score = 182 bits (442), Expect = 6e-45
Identities = 85/124 (68%), Positives = 97/124 (78%)
Frame = +1
Query: 79 ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLV 258
I +G MDVN ALQEVLKTALIH GL G+ EAAKALDKRQA LCV A NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVQASNCDEPMYVKLV 65
Query: 259 QALCNEHQIPLVKVDNNKKLGXWAGLCKIDXDGXARKIVGCSCVVIKDFGXETPALDVLX 438
+AL EHQI L+KVD+NKKLG W GLCKID +G RK+VGCSCVV+KD+G E+ A DV+
Sbjct: 66 EALLAEHQINLIKVDDNKKLGEWVGLCKIDREGNPRKVVGCSCVVVKDYGKESQAKDVIE 125
Query: 439 DYLK 450
+Y K
Sbjct: 126 EYFK 129
>UniRef50_Q201W7 Cluster: 40S ribosomal protein S12; n=1;
Acyrthosiphon pisum|Rep: 40S ribosomal protein S12 -
Acyrthosiphon pisum (Pea aphid)
Length = 136
Score = 156 bits (378), Expect = 3e-37
Identities = 74/136 (54%), Positives = 96/136 (70%)
Frame = +1
Query: 43 MADVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLA 222
M+DVE V G + ++ L+EVLK A ++G L+HG+HE KAL+K+ VLCVLA
Sbjct: 1 MSDVEDAVEV-----GEHGEMYNLLKEVLKNAQVNGSLLHGIHEGTKALEKKLGVLCVLA 55
Query: 223 XNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGXWAGLCKIDXDGXARKIVGCSCVVIKD 402
NC+EA YKKLV LC E+ PL++VD+NK LG W+GLCK D +G ARK+VGCSCVV+K
Sbjct: 56 NNCEEAMYKKLVTGLCAENSTPLIEVDSNKTLGEWSGLCKYDNNGQARKVVGCSCVVVKH 115
Query: 403 FGXETPALDVLXDYLK 450
FG +T LD L + LK
Sbjct: 116 FGDDTQELDTLLEILK 131
>UniRef50_Q9SKZ3 Cluster: 40S ribosomal protein S12-2; n=3;
Magnoliophyta|Rep: 40S ribosomal protein S12-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 146 bits (353), Expect = 3e-34
Identities = 65/118 (55%), Positives = 90/118 (76%)
Frame = +1
Query: 94 NMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCN 273
+MDV+ AL+ ++ + +GG+V GLHE+AK ++KR A LCVLA +C++ Y KLV+ALC
Sbjct: 24 DMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVKALCA 83
Query: 274 EHQIPLVKVDNNKKLGXWAGLCKIDXDGXARKIVGCSCVVIKDFGXETPALDVLXDYL 447
+H I L+ V + K LG WAGLCKID +G ARK+VGCSC+VIKDFG ET AL+++ +L
Sbjct: 84 DHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVIKDFGEETTALNIVKKHL 141
>UniRef50_A2YI73 Cluster: 40S ribosomal protein S12; n=5; Oryza
sativa|Rep: 40S ribosomal protein S12 - Oryza sativa
subsp. indica (Rice)
Length = 156
Score = 141 bits (342), Expect = 7e-33
Identities = 74/152 (48%), Positives = 96/152 (63%), Gaps = 18/152 (11%)
Frame = +1
Query: 49 DVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXN 228
+ +E P P+L G MD+ ALQ V+K + H GLV GL EAAKA++K A LCVLA +
Sbjct: 4 ETPIETPAAPVL-GEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAED 62
Query: 229 CDEAAYKKLVQALCNEHQIPLVKVDNNKKLGXWAG------------------LCKIDXD 354
CD+ Y KLV+ALC EH + LV V + K LG WAG LCKID +
Sbjct: 63 CDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLYEKPSCPGFNNTYCHSQLCKIDSE 122
Query: 355 GXARKIVGCSCVVIKDFGXETPALDVLXDYLK 450
G ARK+VGCSCVV+KD+G E+ L+++ DY+K
Sbjct: 123 GKARKVVGCSCVVVKDYGEESEGLNIVQDYVK 154
>UniRef50_Q5B5V7 Cluster: 40S ribosomal protein S12; n=1; Emericella
nidulans|Rep: 40S ribosomal protein S12 - Emericella
nidulans (Aspergillus nidulans)
Length = 183
Score = 116 bits (280), Expect(2) = 8e-33
Identities = 59/99 (59%), Positives = 70/99 (70%)
Frame = +1
Query: 43 MADVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLA 222
+A EVEVP +G M V AL+ VL+ ALIH GL GL EAAKALD+RQA +CVL
Sbjct: 13 VAAEEVEVPAESG-AGGQMSVLDALKGVLRIALIHDGLARGLREAAKALDRRQAHMCVLN 71
Query: 223 XNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGXWAGLC 339
C+E AYKKLV ALC+EH+IPL+KV + K LG W GLC
Sbjct: 72 EGCEEEAYKKLVVALCSEHKIPLIKVPDGKMLGEWVGLC 110
Score = 46.0 bits (104), Expect(2) = 8e-33
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +1
Query: 340 KIDXDGXARKIVGCSCVVIKDFGXETPALDVLXDYLK 450
++D +G ARK+V CSCVV+KD+G E+ VL +Y +
Sbjct: 144 QLDREGNARKVVNCSCVVVKDWGEESQERSVLLNYFQ 180
>UniRef50_Q54PX9 Cluster: 40S ribosomal protein S12; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S12 - Dictyostelium discoideum AX4
Length = 136
Score = 139 bits (337), Expect = 3e-32
Identities = 68/128 (53%), Positives = 87/128 (67%), Gaps = 4/128 (3%)
Frame = +1
Query: 76 PILSGN----NMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAA 243
P+++ N N D VALQ+V+K +L G+ GLHE KALDKR A LCVLA NCDE
Sbjct: 6 PVIAANPLEKNTDPMVALQKVIKESLAVQGVARGLHETVKALDKRTARLCVLASNCDEPN 65
Query: 244 YKKLVQALCNEHQIPLVKVDNNKKLGXWAGLCKIDXDGXARKIVGCSCVVIKDFGXETPA 423
+ +LV+AL EH IPL++V +NK LG WAGLCK+D D ARK+V CS +VIK FG E+
Sbjct: 66 FVRLVKALATEHNIPLIEVPDNKALGEWAGLCKLDKDLAARKVVACSTLVIKTFGKESDD 125
Query: 424 LDVLXDYL 447
L +Y+
Sbjct: 126 YKFLMEYI 133
>UniRef50_Q5DE28 Cluster: 40S ribosomal protein S12; n=2;
Platyhelminthes|Rep: 40S ribosomal protein S12 -
Schistosoma japonicum (Blood fluke)
Length = 131
Score = 134 bits (324), Expect = 1e-30
Identities = 60/115 (52%), Positives = 82/115 (71%)
Frame = +1
Query: 97 MDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNE 276
MD++ A+Q+VLK A+ G+ GL++ K +++R VLC LA NC+E AY L++ALCNE
Sbjct: 6 MDLDSAVQQVLKNAVKCRGICRGLNQCTKLIEQRGVVLCFLADNCNEKAYTTLIEALCNE 65
Query: 277 HQIPLVKVDNNKKLGXWAGLCKIDXDGXARKIVGCSCVVIKDFGXETPALDVLXD 441
H IPLVKV +NKKLG W+GLCK D +G ARK+V SC+V+ D G E+ L L +
Sbjct: 66 HGIPLVKVPDNKKLGEWSGLCKYDKEGKARKVVSASCIVVTDIGEESYGLKYLVE 120
>UniRef50_Q5CFW0 Cluster: 40S ribosomal protein S12; n=4;
Apicomplexa|Rep: 40S ribosomal protein S12 -
Cryptosporidium hominis
Length = 143
Score = 121 bits (291), Expect = 1e-26
Identities = 57/137 (41%), Positives = 88/137 (64%), Gaps = 2/137 (1%)
Frame = +1
Query: 43 MADVEVEVPTNPILSGNNM--DVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCV 216
M+DVE++ + + D+ A++ VLK + + GGL+ GL+E ALD ++A +C
Sbjct: 1 MSDVEIDQEGTQVQVEQEVVNDLTTAIRYVLKNSFVRGGLLRGLNEVVLALDSKKAQVCF 60
Query: 217 LAXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGXWAGLCKIDXDGXARKIVGCSCVVI 396
LA +C+E YK+LV+ALC E IPL+ V ++K+LG AGLCK+D +G RK+VG + V I
Sbjct: 61 LAESCEEDCYKQLVEALCRERGIPLIMVPDSKELGEMAGLCKVDREGNPRKVVGAASVAI 120
Query: 397 KDFGXETPALDVLXDYL 447
D+G E+ A L ++
Sbjct: 121 VDYGVESEAYHYLQKHI 137
>UniRef50_P48589 Cluster: 40S ribosomal protein S12; n=13;
Saccharomycetales|Rep: 40S ribosomal protein S12 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 143
Score = 116 bits (279), Expect = 3e-25
Identities = 63/139 (45%), Positives = 92/139 (66%), Gaps = 5/139 (3%)
Frame = +1
Query: 43 MADVE--VEVPTNPILSGN-NMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLC 213
M+DVE VEV ++ + + AL+ VL+TAL+H GL GL E+ KAL + +A+L
Sbjct: 1 MSDVEEVVEVQEETVVEQTAEVTIEDALKVVLRTALVHDGLARGLRESTKALTRGEALLV 60
Query: 214 VLAXNCDEAAYKKLVQALCN--EHQIPLVKVDNNKKLGXWAGLCKIDXDGXARKIVGCSC 387
VL + EA KLV+ L N E+++PL+KV + K+LG WAGL KID +G ARK+VG S
Sbjct: 61 VLVSSVTEANIIKLVEGLANDPENKVPLIKVADAKQLGEWAGLGKIDREGNARKVVGASV 120
Query: 388 VVIKDFGXETPALDVLXDY 444
VV+K++G ET L ++ ++
Sbjct: 121 VVVKNWGAETDELSMIMEH 139
>UniRef50_Q03253 Cluster: 40S ribosomal protein S12; n=10;
Trypanosomatidae|Rep: 40S ribosomal protein S12 -
Trypanosoma brucei brucei
Length = 144
Score = 111 bits (268), Expect = 7e-24
Identities = 54/113 (47%), Positives = 72/113 (63%)
Frame = +1
Query: 112 ALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPL 291
AL+ VL A GL+ GL E +ALD+R A LCVLA +C++ YKKLV AL ++ I L
Sbjct: 32 ALRIVLMKARETNGLICGLSEVTRALDRRTAHLCVLADDCEDEEYKKLVTALAKQNNIDL 91
Query: 292 VKVDNNKKLGXWAGLCKIDXDGXARKIVGCSCVVIKDFGXETPALDVLXDYLK 450
V +D +KL WAGL ++ DG RK + CSC+ ++DFG T ALD L L+
Sbjct: 92 VSMDEREKLAQWAGLTRMAADGSVRKTLKCSCLAVRDFGERTKALDYLLSQLQ 144
>UniRef50_O97249 Cluster: 40S ribosomal protein S12; n=5;
Plasmodium|Rep: 40S ribosomal protein S12 - Plasmodium
falciparum (isolate 3D7)
Length = 141
Score = 111 bits (267), Expect = 9e-24
Identities = 58/133 (43%), Positives = 82/133 (61%), Gaps = 2/133 (1%)
Frame = +1
Query: 43 MADVEVEVPTNPILSGNNMDVNV-ALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVL 219
M+DVE N ++ + NV A+Q+V+K A +H GL G+ E K+++ ++A +C L
Sbjct: 1 MSDVE-SADNNVVVEEKAVFDNVTAIQKVIKNAHVHDGLKIGIREVIKSIESQEAKVCFL 59
Query: 220 AXNCDEAAYKKLVQALCNEHQIPLVKVDNNKK-LGXWAGLCKIDXDGXARKIVGCSCVVI 396
+ C E AYKKL+ LC E IPL V N+ K LG WAGL K+D +G ARKI+G S V +
Sbjct: 60 SDVCSEPAYKKLITTLCAEKNIPLFMVQNDSKDLGHWAGLFKLDNEGNARKIIGASSVAV 119
Query: 397 KDFGXETPALDVL 435
DFG ++ D L
Sbjct: 120 VDFGEDSAEKDFL 132
>UniRef50_A7AM93 Cluster: 40S ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S12, putative -
Babesia bovis
Length = 167
Score = 97.9 bits (233), Expect = 1e-19
Identities = 44/114 (38%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
Frame = +1
Query: 115 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLV 294
LQ +L A+ +G L+ G+H+ KA++ + A CV++ E AY KL++ALC EH +P +
Sbjct: 51 LQRLLHLAMANGCLLRGIHQVTKAIEAKNARACVVSTQTSEEAYLKLIRALCKEHGVPCI 110
Query: 295 KVD-NNKKLGXWAGLCKIDXDGXARKIVGCSCVVI-KDFGXETPALDVLXDYLK 450
+ + +++K+G WAGLCK D +G ARKIVG + V I +F ++ + + + +K
Sbjct: 111 ETEFDSEKIGEWAGLCKYDIEGVARKIVGATSVAITNNFDEKSESAEEMISLIK 164
>UniRef50_UPI0000D633F9 Cluster: UPI0000D633F9 related cluster; n=1;
Mus musculus|Rep: UPI0000D633F9 UniRef100 entry - Mus
musculus
Length = 132
Score = 81.8 bits (193), Expect = 8e-15
Identities = 46/125 (36%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Frame = +1
Query: 79 ILSGNNMDVNVALQEVLKTALIHGG-LVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKL 255
+L + +D+N L +VL A H G LV + A A L NC+E Y KL
Sbjct: 6 LLGESKIDINTDLGDVLTYAPSHDGKLVQDTNTAKLPRPSTSAKLS-FPVNCNEPMYVKL 64
Query: 256 VQALCNEHQIPLVKVDNNKKLGXWAGLCKIDXDGXARKIVGCSCVVIKDFGXETPALDVL 435
V+A C EHQI L+K D+ + L W + D +G + K+V C+ VV+K +G E+ A D +
Sbjct: 65 VKAHCAEHQISLIKDDDKRNLREWGRPLQTDQEGKSNKVVVCNSVVVKGYGKESQAKDDI 124
Query: 436 XDYLK 450
+Y K
Sbjct: 125 KEYFK 129
>UniRef50_A0EEB1 Cluster: 40S ribosomal protein S12; n=7; Paramecium
tetraurelia|Rep: 40S ribosomal protein S12 - Paramecium
tetraurelia
Length = 129
Score = 80.2 bits (189), Expect = 3e-14
Identities = 41/100 (41%), Positives = 56/100 (56%)
Frame = +1
Query: 115 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLV 294
L+ V++T+L G L G+HE KA++ +QA VLA +C E YKKL+ AL + QIP+
Sbjct: 14 LKRVVQTSLHRGLLAKGVHEVCKAIESKQAKFVVLADDCTEDTYKKLIVALAKQFQIPVW 73
Query: 295 KVDNNKKLGXWAGLCKIDXDGXARKIVGCSCVVIKDFGXE 414
KV+ LG W G+ K K CS V +K F E
Sbjct: 74 KVEKGALLGEWIGISKFLTKTKKIKSRKCSSVALKHFAIE 113
>UniRef50_Q22W26 Cluster: 40S ribosomal protein S12; n=1;
Tetrahymena thermophila SB210|Rep: 40S ribosomal protein
S12 - Tetrahymena thermophila SB210
Length = 126
Score = 75.8 bits (178), Expect = 5e-13
Identities = 34/111 (30%), Positives = 61/111 (54%)
Frame = +1
Query: 82 LSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQ 261
++ N +N L +V+K++ + GLHE + ++ +QA+ +A +CD+ Y KLV+
Sbjct: 1 MADQNQQLNEVLAKVIKSSNCQDAISKGLHEVLRTIEAKQALFVCVAEDCDQGNYVKLVK 60
Query: 262 ALCNEHQIPLVKVDNNKKLGXWAGLCKIDXDGXARKIVGCSCVVIKDFGXE 414
ALC +++I V V LG + G + G +K+ GCS + I+ + E
Sbjct: 61 ALCAKNEIKYVSVPKRASLGEYLGHFTANAKGEIKKVKGCSSLAIRKYAPE 111
>UniRef50_UPI00004982F0 Cluster: 40S ribosomal protein S12; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S12 - Entamoeba histolytica HM-1:IMSS
Length = 136
Score = 70.5 bits (165), Expect = 2e-11
Identities = 30/94 (31%), Positives = 51/94 (54%)
Frame = +1
Query: 115 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLV 294
++ +L A L G+ + K ++ ++A+ C +A +CD Y L++A+C E + +V
Sbjct: 26 IKAILYQARAQNALTKGIRQCLKVIEAKKALYCFIAEDCDNDKYTGLLKAICKEQGVKIV 85
Query: 295 KVDNNKKLGXWAGLCKIDXDGXARKIVGCSCVVI 396
V +LG W CKI DG A +I CSC ++
Sbjct: 86 MVPQKIQLGEWTNQCKI-RDGAAVRIAKCSCAIV 118
>UniRef50_Q8IGF9 Cluster: RH29995p; n=2; Drosophila
melanogaster|Rep: RH29995p - Drosophila melanogaster
(Fruit fly)
Length = 127
Score = 68.9 bits (161), Expect = 6e-11
Identities = 34/53 (64%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Frame = +1
Query: 40 TMADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDK 195
TMADV+V+VP+ P+L G MD+N ALQEVLK +LI GL+HG+H+A KALDK
Sbjct: 16 TMADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLIHGIHQACKALDK 67
>UniRef50_Q7R1B2 Cluster: GLP_306_61647_62024; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_306_61647_62024 - Giardia lamblia
ATCC 50803
Length = 125
Score = 59.7 bits (138), Expect = 4e-08
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +1
Query: 115 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLV 294
L+E K GLV G + K L++++A +C LA +C+E Y +V+ LC E+++ L
Sbjct: 10 LKETFKRIHNMDGLVTGHRQVFKYLERKRAKICFLASDCEEKQYADIVECLCKEYKVHLC 69
Query: 295 KVDNNKKLGXWAG--LCKIDXDGXARKIVGCSCVVIKDFGXETPALD 429
K + LG G C D D + + +CV+ G + +D
Sbjct: 70 KKFTRRTLGELTGQVRCLADSDKIIKVVPASACVIHNFVGMSSGDVD 116
>UniRef50_Q017M6 Cluster: Homology to unknown gene; n=1;
Ostreococcus tauri|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 473
Score = 55.6 bits (128), Expect = 6e-07
Identities = 41/134 (30%), Positives = 64/134 (47%)
Frame = -1
Query: 462 LARRLEVVXEHIQRWSFXAEIFDDNTGAADNFPCXAIXVNLAETSPXSKLFVVVNLDQWN 283
+AR L+ V +H +R F E+ D + A N A V LA+TSP ++ + + +Q +
Sbjct: 295 VARVLQEVLKHAERRGFLTEVADHDARALHNLTRGAFGVELAQTSPLTERHRLRDANQVH 354
Query: 282 LMFVAQSLNKFLVCGFITVXSQNT*YCLPLVKSFSGFVKTVHKTTMD*SCL*HLLQCYIH 103
+ FVAQ L++ V + + Q+ L + + +T +T S L H LQ
Sbjct: 355 VDFVAQRLDELGVISLVAILRQDADQSLAGLDRLARLAQTAVQTVARASLLQHNLQSRHE 414
Query: 102 VHVVTRQDGVGGDL 61
VH R GGDL
Sbjct: 415 VHRFIRHR--GGDL 426
>UniRef50_A2E257 Cluster: Ribosomal protein L7Ae, putative; n=5;
Trichomonas vaginalis G3|Rep: Ribosomal protein L7Ae,
putative - Trichomonas vaginalis G3
Length = 127
Score = 54.8 bits (126), Expect = 1e-06
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Frame = +1
Query: 106 NVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQI 285
N ++ L + G + G+ KA+ K + L +LA + + YK LV LC +H +
Sbjct: 9 NQVIEAGLHQINLSGTVAKGIKCTIKAILKDKVQLVLLADDTENKDYKNLVAGLCKKHNV 68
Query: 286 PLVKVDNNKKLGXWAGLCKIDXDGXARKIVGCSCVVIKDFG-XETPALD 429
L V+ + LG GL + DG R+ + C I +G ET L+
Sbjct: 69 KLQAVEKKELLGRALGLTHLKADGSVRRQMNCGACAIIGYGKVETEELN 117
>UniRef50_Q3LWI8 Cluster: Ribosomal protein S12; n=1; Bigelowiella
natans|Rep: Ribosomal protein S12 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 110
Score = 48.8 bits (111), Expect = 7e-05
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Frame = +1
Query: 97 MDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNE 276
M + L+ ++K A +V G+ E K + + C+LA NC++ YK ++ LC
Sbjct: 1 MIIEKFLKILIKEATKKNLIVKGIKETIKFIIRGYGYACILAKNCNKKQYKIAIKTLCWI 60
Query: 277 HQIPLVKVDNNKKLGXWAGLCKI----DXDGXARKIVGCS-CVVIK 399
+++ + +++ KKLG LCKI + KI+ CS C++++
Sbjct: 61 YKVKIFIINDKKKLGR---LCKILKRKKSTKHSFKIIPCSVCLILR 103
>UniRef50_A0C845 Cluster: Chromosome undetermined scaffold_157,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_157,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 779
Score = 47.2 bits (107), Expect = 2e-04
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = +1
Query: 172 EAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLVKVD 303
++AKA++ +QA VLA +C E YKKLV AL + QIP+ KV+
Sbjct: 52 KSAKAIESKQAKFIVLADDCSEDTYKKLVIALAKQFQIPVWKVE 95
>UniRef50_UPI0000D56A00 Cluster: PREDICTED: similar to CG11086-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG11086-PA - Tribolium castaneum
Length = 153
Score = 46.4 bits (105), Expect = 4e-04
Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Frame = +1
Query: 91 NNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDK--RQAVLCVLAXNC--DEAAYKK-- 252
N + ALQ VL A G L+ GL A L+ +LCVL D + +
Sbjct: 16 NRNKLGRALQGVLTQAKTEGRLICGLLPAISCLENSLEDVLLCVLPQTRPGDATTHMQTV 75
Query: 253 LVQALCNEHQIPLVKVDNNKKLGXWAGLCKIDXDGXARKIVGCSCVVI 396
L+QA C E+ IP+++VD+++KL + GL G VGC C VI
Sbjct: 76 LLQAFCFENYIPVIQVDSSEKLAQYCGL------GSR---VGCPCAVI 114
>UniRef50_A7T0U1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 148
Score = 45.2 bits (102), Expect = 9e-04
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Frame = +1
Query: 103 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAXN--CDEA--AYKKLVQA 264
+ + L++VL +A L+ H AA+ L D LCVL N D + +L++A
Sbjct: 25 LQLCLEDVLNSARECNELIMTTHGAAEQLEMDPDDVTLCVLVENRHADPGIQVHCRLIEA 84
Query: 265 LCNEHQIPLVKVDNNKKLGXWAG 333
C E+ IP+VKVD+++KL AG
Sbjct: 85 FCWEYPIPVVKVDSSRKLKTIAG 107
>UniRef50_Q3SAE1 Cluster: Ribosomal protein L7A; n=2; Naegleria
gruberi|Rep: Ribosomal protein L7A - Naegleria gruberi
Length = 258
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/56 (35%), Positives = 34/56 (60%)
Frame = +1
Query: 154 LVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 321
L+HG++E KA++++QA L V+A + + + ALC + IP V V + +LG
Sbjct: 135 LIHGINEVVKAVERKQASLVVIAHDVEPIELVLFLPALCKKLDIPYVIVKSKSRLG 190
>UniRef50_Q8ZTA5 Cluster: 50S ribosomal protein L7Ae; n=7;
Archaea|Rep: 50S ribosomal protein L7Ae - Pyrobaculum
aerophilum
Length = 151
Score = 43.2 bits (97), Expect = 0.004
Identities = 25/79 (31%), Positives = 40/79 (50%)
Frame = +1
Query: 100 DVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEH 279
DV E+L A G + G +E KA+++ A L ++A + D + LC E
Sbjct: 29 DVAEKALEILSIARQTGKIKKGTNETTKAVERGLAKLVLIAEDVDPPEVVAHLPLLCEEK 88
Query: 280 QIPLVKVDNNKKLGXWAGL 336
++P V V + +KLG AG+
Sbjct: 89 KVPYVYVPSKEKLGKAAGI 107
>UniRef50_P24522 Cluster: Growth arrest and DNA-damage-inducible
protein GADD45 alpha; n=72; Euteleostomi|Rep: Growth
arrest and DNA-damage-inducible protein GADD45 alpha -
Homo sapiens (Human)
Length = 165
Score = 43.2 bits (97), Expect = 0.004
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Frame = +1
Query: 103 VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAXNCDE------AAYKKLV 258
V AL+EVL AL + G++EAAK L D VLC+LA + D+ + L+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLI 78
Query: 259 QALCNEHQIPLVKVDNNKKL 318
QA C E+ I +++V N +L
Sbjct: 79 QAFCCENDINILRVSNPGRL 98
>UniRef50_Q8SSK9 Cluster: 40S RIBOSOMAL PROTEIN S12; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S12
- Encephalitozoon cuniculi
Length = 134
Score = 41.9 bits (94), Expect = 0.008
Identities = 28/107 (26%), Positives = 48/107 (44%)
Frame = +1
Query: 97 MDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNE 276
M + AL +V K + + L G E K + + ++A N E KLV AL +
Sbjct: 13 MTLQEALSKVCKVSRTYCKLSRGAKETTKKMLADKMSFVMVAENA-EPRISKLVMALAKK 71
Query: 277 HQIPLVKVDNNKKLGXWAGLCKIDXDGXARKIVGCSCVVIKDFGXET 417
IP++ + + +LG G+ + G R GC ++D+ +T
Sbjct: 72 KNIPVISIGSCLELGRIVGVENVSSSGKVRS-KGCCVAGVQDYCEQT 117
>UniRef50_P55858 Cluster: 50S ribosomal protein L7Ae; n=44;
Archaea|Rep: 50S ribosomal protein L7Ae - Sulfolobus
solfataricus
Length = 127
Score = 41.9 bits (94), Expect = 0.008
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +1
Query: 121 EVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLVKV 300
E ++ A G + G +E KA+++ QA L ++A + + LC+E +IP V V
Sbjct: 21 EAVRKAKESGKIKKGTNETTKAVERGQAKLVIIAEDVQPEEIVAHLPLLCDEKKIPYVYV 80
Query: 301 DNNKKLGXWAGL 336
+ K LG GL
Sbjct: 81 SSKKALGEACGL 92
>UniRef50_UPI000059FDC3 Cluster: PREDICTED: similar to growth arrest
and DNA-damage-inducible, gamma; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to growth arrest and
DNA-damage-inducible, gamma - Canis familiaris
Length = 189
Score = 40.7 bits (91), Expect = 0.019
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Frame = +1
Query: 112 ALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAXNCDEAA------YKKLVQAL 267
AL E+L +A G L G++E+AK L D CVLA + ++ + L+QA
Sbjct: 25 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAADAEDEGDIALQIHFTLIQAF 84
Query: 268 CNEHQIPLVKVDNNKKLGXWAG 333
C E+ I +V+V + ++L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>UniRef50_Q6NUV6 Cluster: Zgc:85869; n=5; Euteleostomi|Rep:
Zgc:85869 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 155
Score = 40.7 bits (91), Expect = 0.019
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Frame = +1
Query: 112 ALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAXN----CDEAA--YKKLVQAL 267
AL+EVL +A + L G++E+AK + D CVLA + CD A + L+QA
Sbjct: 22 ALEEVLVSAKANDSLTIGVYESAKVMNVDPDSVSFCVLAVDEEFECDIALQIHFTLIQAF 81
Query: 268 CNEHQIPLVKVDNNKKLGXWAG 333
C ++ I +V+V++ ++L G
Sbjct: 82 CFDNDISIVRVNDMQRLSDIVG 103
>UniRef50_Q9Z9M0 Cluster: Putative ribosomal protein L7Ae-like; n=7;
Firmicutes|Rep: Putative ribosomal protein L7Ae-like -
Bacillus halodurans
Length = 82
Score = 40.3 bits (90), Expect = 0.025
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +1
Query: 154 LVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGXWAG 333
LV G + KAL++ + + V+A + + K V+A+ + QIP++ VD+ KKLG G
Sbjct: 12 LVIGTKQTLKALEQEEVLEVVIAKDAEPRVVNK-VEAMASVKQIPIIYVDSMKKLGKACG 70
Query: 334 L 336
+
Sbjct: 71 I 71
>UniRef50_Q7QJT5 Cluster: ENSANGP00000021535; n=2; Culicidae|Rep:
ENSANGP00000021535 - Anopheles gambiae str. PEST
Length = 135
Score = 39.1 bits (87), Expect = 0.058
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +1
Query: 103 VNVALQEVLKTALIHGGLVHGLHEAAKALDK--RQAVLCVLAXNCDEA--AYKKLVQALC 270
+ ++ L A + GL E+ AL K + C LA + + A ++ L++A C
Sbjct: 5 IGATVRRALVAASREDRAIVGLSESINALSKTPEDFLFCFLAASGNPANHMHQVLLEAFC 64
Query: 271 NEHQIPLVKVDNNKKLGXWAGLCKIDXDGXARK 369
EH I ++KVD+ +KL G +++ +K
Sbjct: 65 FEHDIYIIKVDSAEKLSRMLGTPRVESCALLQK 97
>UniRef50_Q3SAD9 Cluster: Ribosomal protein L7A; n=2; Spironucleus
barkhanus|Rep: Ribosomal protein L7A - Spironucleus
barkhanus
Length = 228
Score = 39.1 bits (87), Expect = 0.058
Identities = 17/61 (27%), Positives = 35/61 (57%)
Frame = +1
Query: 154 LVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGXWAG 333
++ G++E ++K++A L ++A + D + +LC++ QIP + + +LG AG
Sbjct: 110 VISGINEVTNLIEKKKAKLVLIANDVDPIELVMWLPSLCHKMQIPYAIIRSKSELGALAG 169
Query: 334 L 336
L
Sbjct: 170 L 170
>UniRef50_UPI00006CA9C7 Cluster: Ribosomal protein L7Ae containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein L7Ae containing protein - Tetrahymena
thermophila SB210
Length = 161
Score = 38.7 bits (86), Expect = 0.077
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +1
Query: 103 VNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQ 282
+ V + ++++ A+ + L G++E K L+K + L +LA +CD + C E
Sbjct: 51 LTVKILDLIQQAMHYKQLKKGVNEVLKCLNKGVSELVILAADCDPLEIVMNLPGECEEKN 110
Query: 283 IPLVKVDNNKKLGXWAGL 336
+P V + LG G+
Sbjct: 111 VPYCFVSSKSALGRACGI 128
>UniRef50_Q4QIP1 Cluster: 60S ribosomal protein L7a, putative; n=7;
Trypanosomatidae|Rep: 60S ribosomal protein L7a,
putative - Leishmania major
Length = 264
Score = 38.7 bits (86), Expect = 0.077
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +1
Query: 154 LVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGXWAG 333
+V GL E +A++K+QA + V+A N D + LC ++IP V + +LG G
Sbjct: 133 VVTGLQEVTRAIEKKQARMVVIANNVDPVELVLWMPNLCRANKIPYAIVKDMARLGDAIG 192
>UniRef50_A4S6A0 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 171
Score = 38.3 bits (85), Expect = 0.10
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +1
Query: 67 PTNPILSG-NNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAA 243
PT PI + ++ + +V+K A + G+ E KAL K +CV+A +
Sbjct: 38 PTAPIATPLADLKTTKKILKVVKKAAKAKQVRRGVKEVVKALKKETKGVCVIAGDISPID 97
Query: 244 YKKLVQALCNEHQIPLVKVDNNKKLGXWAGLCK 342
V LC E +P V V + ++LG AG+ K
Sbjct: 98 VITHVPILCEEAGVPYVYVHSKEELGA-AGMTK 129
>UniRef50_A0UZZ9 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Clostridium cellulolyticum H10|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Clostridium
cellulolyticum H10
Length = 80
Score = 37.9 bits (84), Expect = 0.13
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = +1
Query: 163 GLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGXWAGLCK 342
G+ ++ KA++ A ++A +C++ + +++ LC +P+ VD+ K+LG C
Sbjct: 13 GVKQSTKAVENGVASSVIIARDCEQRVVRGIIE-LCENKSVPITYVDSMKQLGK---ACG 68
Query: 343 IDXD 354
ID D
Sbjct: 69 IDVD 72
>UniRef50_P32495 Cluster: H/ACA ribonucleoprotein complex subunit 2;
n=4; Saccharomycetales|Rep: H/ACA ribonucleoprotein
complex subunit 2 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 156
Score = 36.7 bits (81), Expect = 0.31
Identities = 22/80 (27%), Positives = 38/80 (47%)
Frame = +1
Query: 103 VNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQ 282
+N + + +K A + G+ E KAL K + L V+A + A + LC +H
Sbjct: 39 LNKKVLKTVKKASKAKNVKRGVKEVVKALRKGEKGLVVIAGDISPADVISHIPVLCEDHS 98
Query: 283 IPLVKVDNNKKLGXWAGLCK 342
+P + + + + LG AG K
Sbjct: 99 VPYIFIPSKQDLGA-AGATK 117
>UniRef50_Q9U3Z7 Cluster: NHP2-like protein; n=71; Eukaryota|Rep:
NHP2-like protein - Drosophila melanogaster (Fruit fly)
Length = 127
Score = 36.3 bits (80), Expect = 0.41
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = +1
Query: 115 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLV 294
+ +L+ AL + L G +EA K L++ A + VLA + + + LC + +P V
Sbjct: 21 IMNLLQQALNYNQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYV 80
Query: 295 KVDNNKKLGXWAGLCK 342
V + + LG G+ +
Sbjct: 81 FVRSKQALGRACGVSR 96
>UniRef50_Q9XXD4 Cluster: Putative H/ACA ribonucleoprotein complex
subunit 2-like protein; n=3; Chromadorea|Rep: Putative
H/ACA ribonucleoprotein complex subunit 2-like protein -
Caenorhabditis elegans
Length = 163
Score = 35.9 bits (79), Expect = 0.54
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +1
Query: 154 LVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGXWAG 333
L G+ + K L + + +C+LA N + +C E +IP V + + ++LG G
Sbjct: 69 LREGIKDVQKELRRNEKGICILAGNVSPIDVYSHIPGICEEKEIPYVYIPSREQLGLAVG 128
>UniRef50_Q9AW38 Cluster: SNU13 snRNP subunit homolog; n=1;
Guillardia theta|Rep: SNU13 snRNP subunit homolog -
Guillardia theta (Cryptomonas phi)
Length = 125
Score = 34.3 bits (75), Expect = 1.7
Identities = 19/81 (23%), Positives = 39/81 (48%)
Frame = +1
Query: 94 NMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCN 273
N ++ V + ++++ A + G +EA K + K + L VLA + D + LC
Sbjct: 12 NENLTVQILDLIEIASSFKLIKKGANEAVKNIKKGKVELLVLASDSDPIEIVLHLPLLCE 71
Query: 274 EHQIPLVKVDNNKKLGXWAGL 336
+ IP + +++ +G G+
Sbjct: 72 DRSIPYIFINSKISIGKACGI 92
>UniRef50_A6MZZ6 Cluster: H/ACA ribonucleoprotein complex subunit 2;
n=4; Oryza sativa|Rep: H/ACA ribonucleoprotein complex
subunit 2 - Oryza sativa subsp. indica (Rice)
Length = 126
Score = 33.9 bits (74), Expect = 2.2
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +1
Query: 154 LVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGXWAG 333
L G+ E K++ + Q LC++A N V LC E IP V V + + L AG
Sbjct: 21 LKRGVKEVVKSIRRGQKGLCIIAGNISPIDVITHVPILCEEANIPYVYVPSKEDLAT-AG 79
Query: 334 LCK 342
K
Sbjct: 80 TTK 82
>UniRef50_A2E3E3 Cluster: 60S ribosomal protein L7a, putative; n=4;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L7a,
putative - Trichomonas vaginalis G3
Length = 244
Score = 33.9 bits (74), Expect = 2.2
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 154 LVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGXWAG 333
LV G+ A++ ++A L ++A + D + ALC +IP V + +LG G
Sbjct: 122 LVQGIKNVTAAVESKKAQLVIIAHDVDPIELVIWLPALCRNLEIPYCIVKSKSRLGQIVG 181
Query: 334 L 336
+
Sbjct: 182 M 182
>UniRef50_UPI000155BC7D Cluster: PREDICTED: similar to zonadhesin,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to zonadhesin, partial - Ornithorhynchus anatinus
Length = 1553
Score = 33.1 bits (72), Expect = 3.8
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -3
Query: 319 QAFCCCQP*PVESDVRCTEPEQVSCMRLHHSXQPKHIVLLASCQEL*R-LREDRAQ 155
Q C C P V S RC C R H +P ++ +C E+ + L ++R Q
Sbjct: 1027 QPGCACDPGYVVSGSRCVSVSSCGCSRGGHYYKPGEVIFSETCDEMCQCLGDNRTQ 1082
>UniRef50_A0PXU0 Cluster: Ribosomal protein L7AE family, putative;
n=1; Clostridium novyi NT|Rep: Ribosomal protein L7AE
family, putative - Clostridium novyi (strain NT)
Length = 80
Score = 33.1 bits (72), Expect = 3.8
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +1
Query: 142 IHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 321
I G V GL + K + + +A N D +VQ L +P++ +D KKLG
Sbjct: 5 IQGEKVIGLKQTMKYIQNDKGKCLYVAKNADGKLTDPVVQ-LATNRLLPIIYIDTMKKLG 63
Query: 322 XWAGL 336
+ G+
Sbjct: 64 MFCGI 68
>UniRef50_UPI00006D0064 Cluster: Ribosomal protein L7Ae containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein L7Ae containing protein - Tetrahymena
thermophila SB210
Length = 286
Score = 32.7 bits (71), Expect = 5.0
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 154 LVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKL 318
L +GL+ ++ +QA L V+A + D + LC ++ +P V N++L
Sbjct: 224 LKYGLNHITTLIENKQAKLVVIAHDVDPIELVIFLPQLCRKNDVPFAFVKGNRQL 278
>UniRef50_Q3W1D8 Cluster: Catalytic domain of components of various
dehydrogenase complexes; n=4; Actinomycetales|Rep:
Catalytic domain of components of various dehydrogenase
complexes - Frankia sp. EAN1pec
Length = 294
Score = 32.7 bits (71), Expect = 5.0
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 100 DVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKL 255
D N AL+ L+T + H VHG K LD R+ VL + N E ++
Sbjct: 110 DANAALRGGLRTRVAHYPFVHGKLTLDKVLDGRRVVLGTVVPNLHEVGLAEI 161
>UniRef50_A3RPQ3 Cluster: Arginase; n=4; Ralstonia|Rep: Arginase -
Ralstonia solanacearum UW551
Length = 309
Score = 32.7 bits (71), Expect = 5.0
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +1
Query: 112 ALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVL--AXNCDEAAYKKLVQALCNEHQI 285
ALQ L+T HGGLVH + A R A L L A ++ EH
Sbjct: 32 ALQR-LRTPDTHGGLVHDIELTTPAGHSRSARLAALPGVAGFSRALADATAHSVHEEHVP 90
Query: 286 PLVKVDNNKKLGXWAGL 336
++ D++ +G W+G+
Sbjct: 91 VVIGGDHSCAIGTWSGV 107
>UniRef50_Q97P44 Cluster: Putative trans-acting regulator SP_1800;
n=17; Streptococcus|Rep: Putative trans-acting regulator
SP_1800 - Streptococcus pneumoniae
Length = 493
Score = 31.9 bits (69), Expect = 8.8
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = -1
Query: 354 IXVNLAETSPXSKLFVVVNLDQWNLMFVAQSLNKF 250
+ +NL + P K+ V+ N DQ++ FVA++L+ +
Sbjct: 392 LVINLLQNQPKLKVLVMSNFDQYHAKFVAETLSYY 426
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 484,768,902
Number of Sequences: 1657284
Number of extensions: 8623741
Number of successful extensions: 22800
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 22238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22788
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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