Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_I21
(513 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0875 - 7265529-7265588,7265681-7265746,7266008-7266293,726... 160 5e-40
07_01_0360 + 2646279-2646283,2647113-2647398,2648043-2648108,264... 159 9e-40
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 33 0.10
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 31 0.41
02_05_0105 + 25874155-25874495,25874586-25874615,25875327-258754... 31 0.54
11_01_0570 - 4529901-4529962,4530725-4530800,4531247-4531306,453... 29 1.7
06_03_0493 + 21402536-21404599 29 1.7
12_01_1092 - 11362094-11362367,11362739-11362795,11363256-113636... 29 2.2
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 29 2.2
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 29 2.9
08_02_1034 + 23823194-23823307,23823399-23823620,23823984-238243... 27 6.7
>07_01_0875 -
7265529-7265588,7265681-7265746,7266008-7266293,
7267138-7267142
Length = 138
Score = 160 bits (389), Expect = 5e-40
Identities = 76/134 (56%), Positives = 96/134 (71%)
Frame = +1
Query: 49 DVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXN 228
+ VE P P+L G MD+ ALQ V+K + H GLV GL EAAKA++K A LCVLA +
Sbjct: 4 ETPVEAPPAPVL-GEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAED 62
Query: 229 CDEAAYKKLVQALCNEHQIPLVKVDNNKKLGXWAGLCKIDXDGXARKIVGCSCVVIKDFG 408
CD+ Y KLV+ALC EH + LV V + K LG WAGLCKID +G ARK+VGCSCVV+KDFG
Sbjct: 63 CDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFG 122
Query: 409 XETPALDVLXDYLK 450
E+ L+++ DY+K
Sbjct: 123 EESEGLNIVQDYVK 136
>07_01_0360 +
2646279-2646283,2647113-2647398,2648043-2648108,
2648199-2648258
Length = 138
Score = 159 bits (387), Expect = 9e-40
Identities = 75/134 (55%), Positives = 96/134 (71%)
Frame = +1
Query: 49 DVEVEVPTNPILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXN 228
+ VE P P+L G MD+ ALQ V+K + H GLV GL EAAKA++K A LCVLA +
Sbjct: 4 ETPVETPAAPVL-GEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAED 62
Query: 229 CDEAAYKKLVQALCNEHQIPLVKVDNNKKLGXWAGLCKIDXDGXARKIVGCSCVVIKDFG 408
CD+ Y KLV+ALC EH + LV V + K LG WAGLCKID +G ARK+VGCSCVV+KD+G
Sbjct: 63 CDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYG 122
Query: 409 XETPALDVLXDYLK 450
E+ L+++ DY+K
Sbjct: 123 EESEGLNIVQDYVK 136
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 33.5 bits (73), Expect = 0.10
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +1
Query: 154 LVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGXWAG 333
L G+ E K++ + Q LC++A N V LC E IP V V + + L AG
Sbjct: 45 LKRGVKEVVKSIRRGQKGLCIIAGNISPIDVITHVPILCEEANIPYVYVPSKEDLAT-AG 103
Query: 334 LCK 342
K
Sbjct: 104 TTK 106
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 31.5 bits (68), Expect = 0.41
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +1
Query: 154 LVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGXWAG 333
L G+ E K++ + LCV+A N V LC E IP + V + + L AG
Sbjct: 45 LKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPILCEEANIPYIYVPSKEDLAT-AG 103
Query: 334 LCK 342
K
Sbjct: 104 TTK 106
>02_05_0105 +
25874155-25874495,25874586-25874615,25875327-25875433,
25875884-25875918,25876310-25876438,25877103-25877294
Length = 277
Score = 31.1 bits (67), Expect = 0.54
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 127 APLAVLHSRPCCYPTRWGWWGPRLQHQP 44
+PLA +RPC +PT W P L+ P
Sbjct: 7 SPLAAAAARPCAFPTPWRCRSPPLRRLP 34
>11_01_0570 -
4529901-4529962,4530725-4530800,4531247-4531306,
4533797-4533959,4534037-4534091,4534314-4534366,
4534881-4534980,4535556-4535703,4535964-4536056
Length = 269
Score = 29.5 bits (63), Expect = 1.7
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -1
Query: 120 LQCYIHVHVVTRQDGVGGDLDF 55
++CY H H++T+ +G GGD +
Sbjct: 213 IECYEHNHLITKVEGDGGDSSY 234
>06_03_0493 + 21402536-21404599
Length = 687
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +1
Query: 109 VALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIP 288
V E+L T LIHG ++ E A L + + D + Y L+Q LCN H++
Sbjct: 394 VRANELLYTTLIHGHFMNKNSEKALGL---LSEMKNKGLELDISLYGALIQGLCNVHKLD 450
Query: 289 LVK 297
K
Sbjct: 451 EAK 453
>12_01_1092 -
11362094-11362367,11362739-11362795,11363256-11363683,
11364350-11365462
Length = 623
Score = 29.1 bits (62), Expect = 2.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 220 AXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 321
A CDE +K + +CN + L + D+N +G
Sbjct: 316 AFKCDEYTVRKCSKVICNRSKNSLYRFDSNASIG 349
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +1
Query: 160 HGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 321
+GL+ +++ +A L V+A + D + ALC + ++P V +LG
Sbjct: 130 YGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLG 183
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 160 HGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 321
+GL +++ +A L V+A + D + ALC + +IP V +LG
Sbjct: 115 YGLDHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLG 168
>08_02_1034 +
23823194-23823307,23823399-23823620,23823984-23824309,
23824648-23824777,23825145-23825441,23825550-23825815,
23827835-23828333,23828902-23828993,23829571-23829735,
23829817-23830204,23830275-23830393,23830494-23830524,
23830675-23830880,23830970-23831014,23831120-23831201,
23832210-23832398,23834499-23834602,23834669-23834759,
23835097-23835225,23835425-23835556,23835779-23835949,
23836143-23836171,23836214-23836301,23836313-23836391,
23836666-23836844
Length = 1390
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +1
Query: 100 DVNVALQEVLKTALIHGGLVHGLHEAAKALD 192
D+ V L + L++ I GLV +H+AA++++
Sbjct: 554 DIRVKLVKALQSEDISTGLVQSIHDAARSIE 584
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,374,594
Number of Sequences: 37544
Number of extensions: 247655
Number of successful extensions: 716
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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