Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_I21
(513 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal ... 201 5e-52
AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p pro... 199 2e-51
AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-P... 199 2e-51
AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-P... 199 2e-51
BT001803-1|AAN71558.1| 127|Drosophila melanogaster RH29995p pro... 69 4e-12
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 36 0.024
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 36 0.024
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 29 3.7
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 29 3.7
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 29 3.7
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 29 3.7
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 29 3.7
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 29 4.9
AY113626-1|AAM29631.1| 163|Drosophila melanogaster RH70774p pro... 29 4.9
AE013599-321|AAF59278.1| 163|Drosophila melanogaster CG11086-PA... 29 4.9
>X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal
protein S12 protein.
Length = 151
Score = 201 bits (490), Expect = 5e-52
Identities = 95/138 (68%), Positives = 115/138 (83%), Gaps = 1/138 (0%)
Frame = +1
Query: 40 TMADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCV 216
TMADV+V+VP+ P+L G MD+N ALQEVLK +LI GLVHG+H+A KALDKRQAVLC+
Sbjct: 12 TMADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCI 70
Query: 217 LAXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGXWAGLCKIDXDGXARKIVGCSCVVI 396
LA + DE YKKLV ALCNEHQIPL++VD++KKLG W+GLCKID +G RK+ GCS VVI
Sbjct: 71 LAESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVI 130
Query: 397 KDFGXETPALDVLXDYLK 450
KDFG ETPALDV+ D+L+
Sbjct: 131 KDFGEETPALDVVKDHLR 148
>AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p
protein.
Length = 139
Score = 199 bits (485), Expect = 2e-51
Identities = 94/137 (68%), Positives = 114/137 (83%), Gaps = 1/137 (0%)
Frame = +1
Query: 43 MADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVL 219
MADV+V+VP+ P+L G MD+N ALQEVLK +LI GLVHG+H+A KALDKRQAVLC+L
Sbjct: 1 MADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCIL 59
Query: 220 AXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGXWAGLCKIDXDGXARKIVGCSCVVIK 399
A + DE YKKLV ALCNEHQIPL++VD++KKLG W+GLCKID +G RK+ GCS VVIK
Sbjct: 60 AESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIK 119
Query: 400 DFGXETPALDVLXDYLK 450
DFG ETPALDV+ D+L+
Sbjct: 120 DFGEETPALDVVKDHLR 136
>AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-PC,
isoform C protein.
Length = 139
Score = 199 bits (485), Expect = 2e-51
Identities = 94/137 (68%), Positives = 114/137 (83%), Gaps = 1/137 (0%)
Frame = +1
Query: 43 MADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVL 219
MADV+V+VP+ P+L G MD+N ALQEVLK +LI GLVHG+H+A KALDKRQAVLC+L
Sbjct: 1 MADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCIL 59
Query: 220 AXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGXWAGLCKIDXDGXARKIVGCSCVVIK 399
A + DE YKKLV ALCNEHQIPL++VD++KKLG W+GLCKID +G RK+ GCS VVIK
Sbjct: 60 AESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIK 119
Query: 400 DFGXETPALDVLXDYLK 450
DFG ETPALDV+ D+L+
Sbjct: 120 DFGEETPALDVVKDHLR 136
>AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-PB,
isoform B protein.
Length = 139
Score = 199 bits (485), Expect = 2e-51
Identities = 94/137 (68%), Positives = 114/137 (83%), Gaps = 1/137 (0%)
Frame = +1
Query: 43 MADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVL 219
MADV+V+VP+ P+L G MD+N ALQEVLK +LI GLVHG+H+A KALDKRQAVLC+L
Sbjct: 1 MADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCIL 59
Query: 220 AXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGXWAGLCKIDXDGXARKIVGCSCVVIK 399
A + DE YKKLV ALCNEHQIPL++VD++KKLG W+GLCKID +G RK+ GCS VVIK
Sbjct: 60 AESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIK 119
Query: 400 DFGXETPALDVLXDYLK 450
DFG ETPALDV+ D+L+
Sbjct: 120 DFGEETPALDVVKDHLR 136
>BT001803-1|AAN71558.1| 127|Drosophila melanogaster RH29995p
protein.
Length = 127
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/53 (64%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Frame = +1
Query: 40 TMADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDK 195
TMADV+V+VP+ P+L G MD+N ALQEVLK +LI GL+HG+H+A KALDK
Sbjct: 16 TMADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLIHGIHQACKALDK 67
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 36.3 bits (80), Expect = 0.024
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = +1
Query: 115 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLV 294
+ +L+ AL + L G +EA K L++ A + VLA + + + LC + +P V
Sbjct: 21 IMNLLQQALNYNQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYV 80
Query: 295 KVDNNKKLGXWAGLCK 342
V + + LG G+ +
Sbjct: 81 FVRSKQALGRACGVSR 96
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 36.3 bits (80), Expect = 0.024
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = +1
Query: 115 LQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLV 294
+ +L+ AL + L G +EA K L++ A + VLA + + + LC + +P V
Sbjct: 21 IMNLLQQALNYNQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYV 80
Query: 295 KVDNNKKLGXWAGLCK 342
V + + LG G+ +
Sbjct: 81 FVRSKQALGRACGVSR 96
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 163 GLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 321
G + K +++++A L V+A + D + ALC + +P V +LG
Sbjct: 144 GTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 163 GLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 321
G + K +++++A L V+A + D + ALC + +P V +LG
Sbjct: 144 GTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 163 GLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 321
G + K +++++A L V+A + D + ALC + +P V +LG
Sbjct: 144 GTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 163 GLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 321
G + K +++++A L V+A + D + ALC + +P V +LG
Sbjct: 144 GTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 163 GLHEAAKALDKRQAVLCVLAXNCDEAAYKKLVQALCNEHQIPLVKVDNNKKLG 321
G + K +++++A L V+A + D + ALC + +P V +LG
Sbjct: 144 GTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 28.7 bits (61), Expect = 4.9
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 242 HTRNLFRLCATNIRFHWS 295
H+R+L RLC N++F W+
Sbjct: 325 HSRHLTRLCKKNVQFEWT 342
>AY113626-1|AAM29631.1| 163|Drosophila melanogaster RH70774p
protein.
Length = 163
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Frame = +1
Query: 115 LQEVLKTALIHGGLVHGLHEAAKALDKRQ--AVLCVLAXNCD-EAA---YKKLVQALCNE 276
++ L A ++ GL A L K ++ C++A D ++A ++ L++A C E
Sbjct: 35 IKSALLRAQSEARVIVGLSAAINVLSKSPEGSLFCLMAQPKDGDSATHMHEVLLEAFCYE 94
Query: 277 HQIPLVKVDNNKKLGXWAGLCKIDXDGXARKI 372
+ I ++KVD+ KL G ++ +K+
Sbjct: 95 NDIYVIKVDDATKLSRILGQDSVESCCLVQKV 126
>AE013599-321|AAF59278.1| 163|Drosophila melanogaster CG11086-PA
protein.
Length = 163
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Frame = +1
Query: 115 LQEVLKTALIHGGLVHGLHEAAKALDKRQ--AVLCVLAXNCD-EAA---YKKLVQALCNE 276
++ L A ++ GL A L K ++ C++A D ++A ++ L++A C E
Sbjct: 35 IKSALLRAQSEARVIVGLSAAINVLSKSPEGSLFCLMAQPKDGDSATHMHEVLLEAFCYE 94
Query: 277 HQIPLVKVDNNKKLGXWAGLCKIDXDGXARKI 372
+ I ++KVD+ KL G ++ +K+
Sbjct: 95 NDIYVIKVDDATKLSRILGQDSVESCCLVQKV 126
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,314,432
Number of Sequences: 53049
Number of extensions: 425026
Number of successful extensions: 1065
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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