Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_I19
         (400 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0152 - 1168928-1169377                                          139   9e-34
11_01_0155 - 1287003-1287452                                          139   9e-34
07_03_1553 - 27653473-27653490,27653634-27653673,27653852-276539...    32   0.15 
03_06_0097 - 31632238-31632525,31633386-31633769                       30   0.59 
11_01_0523 - 4109070-4109984,4110532-4110936                           28   3.1  
02_05_0156 + 26341904-26342801,26343469-26344148                       27   4.1  
01_06_0609 + 30583191-30583229,30583799-30583907,30584377-30585518     27   7.2  
11_06_0598 - 25391923-25393197                                         26   9.5  
02_05_0056 + 25461423-25461708,25461986-25462026,25466047-254660...    26   9.5  

>12_01_0152 - 1168928-1169377
          Length = 149

 Score =  139 bits (336), Expect = 9e-34
 Identities = 61/80 (76%), Positives = 73/80 (91%)
 Frame = +2

Query: 65  DIRVTVKGGGHVAQVYAIRQAISKALIAFYXKYVDEASKKEIKDILVQYDRSLLVADPRR 244
           D+R+ V+GGG  +Q+YAIRQAI+KAL+A+Y KYVDEASKKE+KDI  +YDR+LLVADPRR
Sbjct: 70  DMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVADPRR 129

Query: 245 CEPKKFGGPGARARYQKSYR 304
           CEPKKFGG GARAR+QKSYR
Sbjct: 130 CEPKKFGGRGARARFQKSYR 149


>11_01_0155 - 1287003-1287452
          Length = 149

 Score =  139 bits (336), Expect = 9e-34
 Identities = 61/80 (76%), Positives = 73/80 (91%)
 Frame = +2

Query: 65  DIRVTVKGGGHVAQVYAIRQAISKALIAFYXKYVDEASKKEIKDILVQYDRSLLVADPRR 244
           D+R+ V+GGG  +Q+YAIRQAI+KAL+A+Y KYVDEASKKE+KDI  +YDR+LLVADPRR
Sbjct: 70  DMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVADPRR 129

Query: 245 CEPKKFGGPGARARYQKSYR 304
           CEPKKFGG GARAR+QKSYR
Sbjct: 130 CEPKKFGGRGARARFQKSYR 149


>07_03_1553 -
           27653473-27653490,27653634-27653673,27653852-27653939,
           27654150-27654230,27654644-27655084,27655692-27656325
          Length = 433

 Score = 32.3 bits (70), Expect = 0.15
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = +2

Query: 62  FDIRVTVKGGGHVAQVYAIRQAISKAL 142
           +D+  TVKGGG   QV AIR  IS+AL
Sbjct: 346 WDVTCTVKGGGVSGQVGAIRLGISRAL 372


>03_06_0097 - 31632238-31632525,31633386-31633769
          Length = 223

 Score = 30.3 bits (65), Expect = 0.59
 Identities = 27/81 (33%), Positives = 37/81 (45%)
 Frame = +2

Query: 62  FDIRVTVKGGGHVAQVYAIRQAISKALIAFYXKYVDEASKKEIKDILVQYDRSLLVADPR 241
           +D+ V V GGG   Q  AI   +++AL+      +  A+K  ++         LL  D R
Sbjct: 154 YDVFVKVHGGGLSGQAQAICLGVARALVK-----ISTANKVTLR------GEGLLTRDTR 202

Query: 242 RCEPKKFGGPGARARYQKSYR 304
             E KK G   AR R Q S R
Sbjct: 203 IVERKKAGLKKARKRPQFSKR 223


>11_01_0523 - 4109070-4109984,4110532-4110936
          Length = 439

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 86  GGGHVAQVYAIRQAISKALIAFY 154
           GGG    V  +++A++KAL+AFY
Sbjct: 48  GGGGFFDVGRLKEALAKALVAFY 70


>02_05_0156 + 26341904-26342801,26343469-26344148
          Length = 525

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 323 WFR*RLNGKISGIWHGH 273
           WFR R  G I GIW+ H
Sbjct: 155 WFRGRRRGLIMGIWNAH 171


>01_06_0609 + 30583191-30583229,30583799-30583907,30584377-30585518
          Length = 429

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 288 TRNLTVKPSTKPSGGIVAASCCHCDIIGW 374
           TR   V  + +   G+ A + CH D  GW
Sbjct: 367 TRAYAVSMAGRDGTGVEAVAVCHADTAGW 395


>11_06_0598 - 25391923-25393197
          Length = 424

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = -2

Query: 285 LARAPGPPNFLGSQRRGSATSKLLSY*TRMSLISFFEASSTYXW*KAIRAF 133
           LA    PP  L S      TS L  + T +  ++    S+TY    AIR F
Sbjct: 254 LATLVSPPKLLQSLNISGITSGLPDWITELDQLTKITLSNTYLGEDAIRVF 304


>02_05_0056 +
           25461423-25461708,25461986-25462026,25466047-25466083,
           25466451-25466594,25466882-25466974,25467067-25467155,
           25467241-25467537,25467629-25467765,25467860-25467952,
           25468061-25468166,25468243-25468395
          Length = 491

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 74  VTVKGGGHVAQVYAIRQAIS 133
           VT++G GH   ++A RQA+S
Sbjct: 455 VTIRGAGHEVPLHAPRQALS 474


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,823,695
Number of Sequences: 37544
Number of extensions: 191306
Number of successful extensions: 521
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 682720236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)