Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_I19
(400 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 155 5e-38
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 155 5e-38
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 155 5e-38
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 155 5e-38
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 62 7e-10
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 42 0.001
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 42 0.001
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 36 0.065
Y08982-1|CAA70171.1| 1530|Homo sapiens synaptonemal complex late... 31 1.1
BC146798-1|AAI46799.1| 792|Homo sapiens Unknown (protein for IM... 31 1.1
BC132870-1|AAI32871.1| 1530|Homo sapiens synaptonemal complex pr... 31 1.1
BC132864-1|AAI32865.1| 1530|Homo sapiens synaptonemal complex pr... 31 1.1
BC040566-1|AAH40566.1| 1024|Homo sapiens SYCP2 protein protein. 31 1.1
AL158092-3|CAM28338.1| 1023|Homo sapiens synaptonemal complex pr... 31 1.1
AL158092-2|CAC36022.2| 1530|Homo sapiens synaptonemal complex pr... 31 1.1
AL109928-10|CAM28269.1| 1023|Homo sapiens synaptonemal complex p... 31 1.1
AL109928-9|CAI21795.1| 1530|Homo sapiens synaptonemal complex pr... 31 1.1
AL080226-1|CAB45780.1| 520|Homo sapiens hypothetical protein pr... 31 1.1
M62302-2|AAA58501.1| 372|Homo sapiens growth/differentiation fa... 30 3.3
BC054882-1|AAH54882.1| 204|Homo sapiens Unknown (protein for IM... 30 3.3
AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein. 30 3.3
AL391827-2|CAI16231.1| 198|Homo sapiens novel protein protein. 30 3.3
AC003972-2|AAB94786.1| 372|Homo sapiens GDF-1 protein. 30 3.3
Y08201-1|CAA69383.1| 331|Homo sapiens rab geranylgeranyl transf... 28 9.9
X98001-1|CAA66638.1| 331|Homo sapiens geranylgeranyl transferas... 28 9.9
U49245-1|AAA91473.1| 331|Homo sapiens geranylgeranyl transferas... 28 9.9
S70458-1|AAB30799.1| 56|Homo sapiens cellular adhesion regulat... 28 9.9
S54769-1|AAB25303.1| 82|Homo sapiens cellular adhesion regulat... 28 9.9
CR456941-1|CAG33222.1| 331|Homo sapiens RABGGTB protein. 28 9.9
BC020790-1|AAH20790.1| 331|Homo sapiens Rab geranylgeranyltrans... 28 9.9
AL357314-5|CAI22393.1| 331|Homo sapiens Rab geranylgeranyltrans... 28 9.9
AL122010-1|CAI23556.1| 979|Homo sapiens discs, large (Drosophil... 28 9.9
AB209023-1|BAD92260.1| 320|Homo sapiens Rab geranylgeranyltrans... 28 9.9
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 155 bits (376), Expect = 5e-38
Identities = 71/80 (88%), Positives = 77/80 (96%)
Frame = +2
Query: 65 DIRVTVKGGGHVAQVYAIRQAISKALIAFYXKYVDEASKKEIKDILVQYDRSLLVADPRR 244
DIRV VKGGGHVAQ+YAIRQ+ISKAL+A+Y KYVDEASKKEIKDIL+QYDR+LLVADPRR
Sbjct: 67 DIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRR 126
Query: 245 CEPKKFGGPGARARYQKSYR 304
CE KKFGGPGARARYQKSYR
Sbjct: 127 CESKKFGGPGARARYQKSYR 146
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +1
Query: 7 RYKLQEPILLLGKEKFSMV 63
+YKL EP+LLLGKE+F+ V
Sbjct: 48 QYKLLEPVLLLGKERFAGV 66
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 155 bits (376), Expect = 5e-38
Identities = 71/80 (88%), Positives = 77/80 (96%)
Frame = +2
Query: 65 DIRVTVKGGGHVAQVYAIRQAISKALIAFYXKYVDEASKKEIKDILVQYDRSLLVADPRR 244
DIRV VKGGGHVAQ+YAIRQ+ISKAL+A+Y KYVDEASKKEIKDIL+QYDR+LLVADPRR
Sbjct: 67 DIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRR 126
Query: 245 CEPKKFGGPGARARYQKSYR 304
CE KKFGGPGARARYQKSYR
Sbjct: 127 CESKKFGGPGARARYQKSYR 146
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +1
Query: 7 RYKLQEPILLLGKEKFSMV 63
+YKL EP+LLLGKE+F+ V
Sbjct: 48 QYKLLEPVLLLGKERFAGV 66
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 155 bits (376), Expect = 5e-38
Identities = 71/80 (88%), Positives = 77/80 (96%)
Frame = +2
Query: 65 DIRVTVKGGGHVAQVYAIRQAISKALIAFYXKYVDEASKKEIKDILVQYDRSLLVADPRR 244
DIRV VKGGGHVAQ+YAIRQ+ISKAL+A+Y KYVDEASKKEIKDIL+QYDR+LLVADPRR
Sbjct: 67 DIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRR 126
Query: 245 CEPKKFGGPGARARYQKSYR 304
CE KKFGGPGARARYQKSYR
Sbjct: 127 CESKKFGGPGARARYQKSYR 146
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +1
Query: 7 RYKLQEPILLLGKEKFSMV 63
+YKL EP+LLLGKE+F+ V
Sbjct: 48 QYKLLEPVLLLGKERFAGV 66
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 155 bits (376), Expect = 5e-38
Identities = 71/80 (88%), Positives = 77/80 (96%)
Frame = +2
Query: 65 DIRVTVKGGGHVAQVYAIRQAISKALIAFYXKYVDEASKKEIKDILVQYDRSLLVADPRR 244
DIRV VKGGGHVAQ+YAIRQ+ISKAL+A+Y KYVDEASKKEIKDIL+QYDR+LLVADPRR
Sbjct: 67 DIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRR 126
Query: 245 CEPKKFGGPGARARYQKSYR 304
CE KKFGGPGARARYQKSYR
Sbjct: 127 CESKKFGGPGARARYQKSYR 146
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +1
Query: 7 RYKLQEPILLLGKEKFSMV 63
+YKL EP+LLLGKE+F+ V
Sbjct: 48 QYKLLEPVLLLGKERFAGV 66
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 62.1 bits (144), Expect = 7e-10
Identities = 31/48 (64%), Positives = 36/48 (75%)
Frame = +2
Query: 65 DIRVTVKGGGHVAQVYAIRQAISKALIAFYXKYVDEASKKEIKDILVQ 208
DI V VKG GHV Q+YA+ Q ISKAL+ Y KYVDEAS +EIKD L +
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 41.5 bits (93), Expect = 0.001
Identities = 30/75 (40%), Positives = 37/75 (49%)
Frame = +2
Query: 65 DIRVTVKGGGHVAQVYAIRQAISKALIAFYXKYVDEASKKEIKDILVQYDRSLLVADPRR 244
D+ TV GGG AQ AIR A++KAL +F + DE LL DPR
Sbjct: 327 DVTCTVSGGGRSAQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRV 376
Query: 245 CEPKKFGGPGARARY 289
E KK G GAR ++
Sbjct: 377 RERKKPGQEGARRKF 391
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 41.5 bits (93), Expect = 0.001
Identities = 30/75 (40%), Positives = 37/75 (49%)
Frame = +2
Query: 65 DIRVTVKGGGHVAQVYAIRQAISKALIAFYXKYVDEASKKEIKDILVQYDRSLLVADPRR 244
D+ TV GGG AQ AIR A++KAL +F + DE LL DPR
Sbjct: 233 DVTCTVSGGGRSAQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRV 282
Query: 245 CEPKKFGGPGARARY 289
E KK G GAR ++
Sbjct: 283 RERKKPGQEGARRKF 297
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 35.5 bits (78), Expect = 0.065
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +2
Query: 65 DIRVTVKGGGHVAQVYAIRQAI 130
DIRV VKGGGHVAQ+Y Q +
Sbjct: 67 DIRVRVKGGGHVAQIYGESQEL 88
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +1
Query: 7 RYKLQEPILLLGKEKFSMV 63
+YKL EP+LLLGKE+F+ V
Sbjct: 48 QYKLLEPVLLLGKERFAGV 66
Score = 28.3 bits (60), Expect = 9.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 147 PSTXNM*TKPQRRKSKTS*FNTIGVCW 227
P T NM + RR+SKTS + G CW
Sbjct: 126 PITRNMWMRLPRRRSKTSSSSMTGPCW 152
>Y08982-1|CAA70171.1| 1530|Homo sapiens synaptonemal complex lateral
element protein protein.
Length = 1530
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 104 QVYAIRQAISKALIAFYXKYVDEASKKEIKDILVQYDRSLLVAD 235
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC146798-1|AAI46799.1| 792|Homo sapiens Unknown (protein for
IMAGE:8860302) protein.
Length = 792
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 104 QVYAIRQAISKALIAFYXKYVDEASKKEIKDILVQYDRSLLVAD 235
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 338 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 381
>BC132870-1|AAI32871.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 104 QVYAIRQAISKALIAFYXKYVDEASKKEIKDILVQYDRSLLVAD 235
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC132864-1|AAI32865.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 104 QVYAIRQAISKALIAFYXKYVDEASKKEIKDILVQYDRSLLVAD 235
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC040566-1|AAH40566.1| 1024|Homo sapiens SYCP2 protein protein.
Length = 1024
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 104 QVYAIRQAISKALIAFYXKYVDEASKKEIKDILVQYDRSLLVAD 235
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL158092-3|CAM28338.1| 1023|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1023
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 104 QVYAIRQAISKALIAFYXKYVDEASKKEIKDILVQYDRSLLVAD 235
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL158092-2|CAC36022.2| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 104 QVYAIRQAISKALIAFYXKYVDEASKKEIKDILVQYDRSLLVAD 235
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL109928-10|CAM28269.1| 1023|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1023
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 104 QVYAIRQAISKALIAFYXKYVDEASKKEIKDILVQYDRSLLVAD 235
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL109928-9|CAI21795.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 104 QVYAIRQAISKALIAFYXKYVDEASKKEIKDILVQYDRSLLVAD 235
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL080226-1|CAB45780.1| 520|Homo sapiens hypothetical protein
protein.
Length = 520
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 104 QVYAIRQAISKALIAFYXKYVDEASKKEIKDILVQYDRSLLVAD 235
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 61 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 104
>M62302-2|AAA58501.1| 372|Homo sapiens growth/differentiation
factor 1 protein.
Length = 372
Score = 29.9 bits (64), Expect = 3.3
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 197 ILVQYDRSLL--VADPRR-CEPKKFGGPGARARYQKSYR*AFNETIGWYR 337
+LV D L +A PRR EP GGPG R ++ Y +F E +GW+R
Sbjct: 236 LLVTLDPRLCHPLARPRRDAEPVLGGGPGGACRARRLYV-SFRE-VGWHR 283
>BC054882-1|AAH54882.1| 204|Homo sapiens Unknown (protein for
IMAGE:6451327) protein.
Length = 204
Score = 29.9 bits (64), Expect = 3.3
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 173 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 256
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein.
Length = 689
Score = 29.9 bits (64), Expect = 3.3
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 173 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 256
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AL391827-2|CAI16231.1| 198|Homo sapiens novel protein protein.
Length = 198
Score = 29.9 bits (64), Expect = 3.3
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 173 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 256
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AC003972-2|AAB94786.1| 372|Homo sapiens GDF-1 protein.
Length = 372
Score = 29.9 bits (64), Expect = 3.3
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 197 ILVQYDRSLL--VADPRR-CEPKKFGGPGARARYQKSYR*AFNETIGWYR 337
+LV D L +A PRR EP GGPG R ++ Y +F E +GW+R
Sbjct: 236 LLVTLDPRLCHPLARPRRDAEPVLGGGPGGACRARRLYV-SFRE-VGWHR 283
>Y08201-1|CAA69383.1| 331|Homo sapiens rab geranylgeranyl
transferase protein.
Length = 331
Score = 28.3 bits (60), Expect = 9.9
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 73 SDSQGWWSCSTSLRYPTSYFKGSDRLLPXIC 165
SD GWW C L P+ G LP +C
Sbjct: 212 SDLLGWWLCERQL--PSGGLNGRPEKLPDVC 240
>X98001-1|CAA66638.1| 331|Homo sapiens geranylgeranyl transferase
II protein.
Length = 331
Score = 28.3 bits (60), Expect = 9.9
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 73 SDSQGWWSCSTSLRYPTSYFKGSDRLLPXIC 165
SD GWW C L P+ G LP +C
Sbjct: 212 SDLLGWWLCERQL--PSGGLNGRPEKLPDVC 240
>U49245-1|AAA91473.1| 331|Homo sapiens geranylgeranyl transferase
type II beta-subunit protein.
Length = 331
Score = 28.3 bits (60), Expect = 9.9
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 73 SDSQGWWSCSTSLRYPTSYFKGSDRLLPXIC 165
SD GWW C L P+ G LP +C
Sbjct: 212 SDLLGWWLCERQL--PSGGLNGRPEKLPDVC 240
>S70458-1|AAB30799.1| 56|Homo sapiens cellular adhesion regulatory
molecule protein.
Length = 56
Score = 28.3 bits (60), Expect = 9.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 324 SGGIVAASCCHCDIIGWCTIK 386
SGG+ A CCH D WC ++
Sbjct: 12 SGGLTTAPCCHVD---WCKLR 29
>S54769-1|AAB25303.1| 82|Homo sapiens cellular adhesion regulatory
molecule protein.
Length = 82
Score = 28.3 bits (60), Expect = 9.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 324 SGGIVAASCCHCDIIGWCTIK 386
SGG+ A CCH D WC ++
Sbjct: 38 SGGLTTAPCCHVD---WCKLR 55
>CR456941-1|CAG33222.1| 331|Homo sapiens RABGGTB protein.
Length = 331
Score = 28.3 bits (60), Expect = 9.9
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 73 SDSQGWWSCSTSLRYPTSYFKGSDRLLPXIC 165
SD GWW C L P+ G LP +C
Sbjct: 212 SDLLGWWLCERQL--PSGGLNGRPEKLPDVC 240
>BC020790-1|AAH20790.1| 331|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 331
Score = 28.3 bits (60), Expect = 9.9
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 73 SDSQGWWSCSTSLRYPTSYFKGSDRLLPXIC 165
SD GWW C L P+ G LP +C
Sbjct: 212 SDLLGWWLCERQL--PSGGLNGRPEKLPDVC 240
>AL357314-5|CAI22393.1| 331|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 331
Score = 28.3 bits (60), Expect = 9.9
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 73 SDSQGWWSCSTSLRYPTSYFKGSDRLLPXIC 165
SD GWW C L P+ G LP +C
Sbjct: 212 SDLLGWWLCERQL--PSGGLNGRPEKLPDVC 240
>AL122010-1|CAI23556.1| 979|Homo sapiens discs, large (Drosophila)
homolog-associated protein 3 protein.
Length = 979
Score = 28.3 bits (60), Expect = 9.9
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 64 RHQSDSQGWWSCSTSLRYPTSYFKG 138
RHQ+ S GWWS +L + + G
Sbjct: 252 RHQAKSTGWWSSDDNLDSDSGFLAG 276
>AB209023-1|BAD92260.1| 320|Homo sapiens Rab
geranylgeranyltransferase, beta subunit variant protein.
Length = 320
Score = 28.3 bits (60), Expect = 9.9
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 73 SDSQGWWSCSTSLRYPTSYFKGSDRLLPXIC 165
SD GWW C L P+ G LP +C
Sbjct: 212 SDLLGWWLCERQL--PSGGLNGRPEKLPDVC 240
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,827,849
Number of Sequences: 237096
Number of extensions: 1064255
Number of successful extensions: 2336
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2334
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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