Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_I12
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC010354-1|AAH10354.1| 345|Homo sapiens growth hormone inducibl... 96 1e-19
AY358824-1|AAQ89183.1| 345|Homo sapiens PTD010 protein. 96 1e-19
AL603756-1|CAH72660.1| 345|Homo sapiens growth hormone inducibl... 96 1e-19
AF131820-1|AAD20052.1| 345|Homo sapiens Unknown protein. 96 1e-19
AB009685-1|BAA93049.1| 345|Homo sapiens DERP2 protein. 96 1e-19
CR533519-1|CAG38550.1| 345|Homo sapiens GHITM protein. 94 3e-19
AF060923-1|AAG43135.1| 345|Homo sapiens My021 protein protein. 93 8e-19
AL603756-2|CAH72661.1| 325|Homo sapiens growth hormone inducibl... 84 4e-16
BC071696-1|AAH71696.1| 498|Homo sapiens FLJ10404 protein protein. 34 0.38
AY330211-1|AAP92113.1| 605|Homo sapiens netrin 4 protein. 30 8.2
AF297711-1|AAG53651.1| 628|Homo sapiens netrin 4 precursor prot... 30 8.2
AF278532-1|AAG30822.1| 628|Homo sapiens beta-netrin protein. 30 8.2
>BC010354-1|AAH10354.1| 345|Homo sapiens growth hormone inducible
transmembrane protein protein.
Length = 345
Score = 95.9 bits (228), Expect = 1e-19
Identities = 55/151 (36%), Positives = 83/151 (54%), Gaps = 10/151 (6%)
Frame = +1
Query: 229 SPVPQNFVPRNYVVRNYARE--PRTRVATRSQPT---LRERLMAPAGPNAFXXXXXXX-- 387
SPV +N + +N + +RE +TR+ R T L+E + P+ F
Sbjct: 25 SPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQELKEAALEPSMEKIFKIDQMGRWF 84
Query: 388 -XXXXXXXXXXXCYYGSGVKP--GTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVA 558
CYYG G+ G ++++ +WPQYVK+RI +TY Y+AGS+ LTA SA+A
Sbjct: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIA 144
Query: 559 VFRTPALLNLVARNGWMSIIVTLGLMIGSGM 651
+ RTP L+N + R W++I VT M+G+GM
Sbjct: 145 ISRTPVLMNFMMRGSWVTIGVTFAAMVGAGM 175
>AY358824-1|AAQ89183.1| 345|Homo sapiens PTD010 protein.
Length = 345
Score = 95.9 bits (228), Expect = 1e-19
Identities = 55/151 (36%), Positives = 83/151 (54%), Gaps = 10/151 (6%)
Frame = +1
Query: 229 SPVPQNFVPRNYVVRNYARE--PRTRVATRSQPT---LRERLMAPAGPNAFXXXXXXX-- 387
SPV +N + +N + +RE +TR+ R T L+E + P+ F
Sbjct: 25 SPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQELKEAALEPSMEKIFKIDQMGRWF 84
Query: 388 -XXXXXXXXXXXCYYGSGVKP--GTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVA 558
CYYG G+ G ++++ +WPQYVK+RI +TY Y+AGS+ LTA SA+A
Sbjct: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIA 144
Query: 559 VFRTPALLNLVARNGWMSIIVTLGLMIGSGM 651
+ RTP L+N + R W++I VT M+G+GM
Sbjct: 145 ISRTPVLMNFMMRGSWVTIGVTFAAMVGAGM 175
>AL603756-1|CAH72660.1| 345|Homo sapiens growth hormone inducible
transmembrane protein protein.
Length = 345
Score = 95.9 bits (228), Expect = 1e-19
Identities = 55/151 (36%), Positives = 83/151 (54%), Gaps = 10/151 (6%)
Frame = +1
Query: 229 SPVPQNFVPRNYVVRNYARE--PRTRVATRSQPT---LRERLMAPAGPNAFXXXXXXX-- 387
SPV +N + +N + +RE +TR+ R T L+E + P+ F
Sbjct: 25 SPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQELKEAALEPSMEKIFKIDQMGRWF 84
Query: 388 -XXXXXXXXXXXCYYGSGVKP--GTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVA 558
CYYG G+ G ++++ +WPQYVK+RI +TY Y+AGS+ LTA SA+A
Sbjct: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIA 144
Query: 559 VFRTPALLNLVARNGWMSIIVTLGLMIGSGM 651
+ RTP L+N + R W++I VT M+G+GM
Sbjct: 145 ISRTPVLMNFMMRGSWVTIGVTFAAMVGAGM 175
>AF131820-1|AAD20052.1| 345|Homo sapiens Unknown protein.
Length = 345
Score = 95.9 bits (228), Expect = 1e-19
Identities = 55/151 (36%), Positives = 83/151 (54%), Gaps = 10/151 (6%)
Frame = +1
Query: 229 SPVPQNFVPRNYVVRNYARE--PRTRVATRSQPT---LRERLMAPAGPNAFXXXXXXX-- 387
SPV +N + +N + +RE +TR+ R T L+E + P+ F
Sbjct: 25 SPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQELKEAALEPSMEKIFKIDQMGRWF 84
Query: 388 -XXXXXXXXXXXCYYGSGVKP--GTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVA 558
CYYG G+ G ++++ +WPQYVK+RI +TY Y+AGS+ LTA SA+A
Sbjct: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIA 144
Query: 559 VFRTPALLNLVARNGWMSIIVTLGLMIGSGM 651
+ RTP L+N + R W++I VT M+G+GM
Sbjct: 145 ISRTPVLMNFMMRGSWVTIGVTFAAMVGAGM 175
>AB009685-1|BAA93049.1| 345|Homo sapiens DERP2 protein.
Length = 345
Score = 95.9 bits (228), Expect = 1e-19
Identities = 55/151 (36%), Positives = 83/151 (54%), Gaps = 10/151 (6%)
Frame = +1
Query: 229 SPVPQNFVPRNYVVRNYARE--PRTRVATRSQPT---LRERLMAPAGPNAFXXXXXXX-- 387
SPV +N + +N + +RE +TR+ R T L+E + P+ F
Sbjct: 25 SPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQELKEAALEPSMEKIFKIDQMGRWF 84
Query: 388 -XXXXXXXXXXXCYYGSGVKP--GTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVA 558
CYYG G+ G ++++ +WPQYVK+RI +TY Y+AGS+ LTA SA+A
Sbjct: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIA 144
Query: 559 VFRTPALLNLVARNGWMSIIVTLGLMIGSGM 651
+ RTP L+N + R W++I VT M+G+GM
Sbjct: 145 ISRTPVLMNFMMRGSWVTIGVTFAAMVGAGM 175
>CR533519-1|CAG38550.1| 345|Homo sapiens GHITM protein.
Length = 345
Score = 94.3 bits (224), Expect = 3e-19
Identities = 54/151 (35%), Positives = 83/151 (54%), Gaps = 10/151 (6%)
Frame = +1
Query: 229 SPVPQNFVPRNYVVRNYARE--PRTRVATRSQPT---LRERLMAPAGPNAFXXXXXXX-- 387
SPV +N + +N + +RE +TR+ R T L+E + P+ F
Sbjct: 25 SPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQELKEAALEPSMEKMFKIDQMGRWF 84
Query: 388 -XXXXXXXXXXXCYYGSGVKP--GTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVA 558
CYYG G+ G ++++ +WP+YVK+RI +TY Y+AGS+ LTA SA+A
Sbjct: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPRYVKDRIHSTYMYLAGSIGLTALSAIA 144
Query: 559 VFRTPALLNLVARNGWMSIIVTLGLMIGSGM 651
+ RTP L+N + R W++I VT M+G+GM
Sbjct: 145 ISRTPVLMNFMMRGSWVTIGVTFAAMVGAGM 175
>AF060923-1|AAG43135.1| 345|Homo sapiens My021 protein protein.
Length = 345
Score = 93.1 bits (221), Expect = 8e-19
Identities = 54/151 (35%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Frame = +1
Query: 229 SPVPQNFVPRNYVVRNYARE--PRTRVATRSQPT---LRERLMAPAGPNAFXXXXXXX-- 387
SPV +N + +N + +RE +TR+ R T L+ + P+ F
Sbjct: 25 SPVVKNSITKNQWLLTPSREYATKTRIGIRRGRTGQELKGAALEPSMEKIFKIDQMGRWF 84
Query: 388 -XXXXXXXXXXXCYYGSGVKP--GTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVA 558
CYYG G+ G ++++ +WPQYVK+RI +TY Y+AGS+ LTA SA+A
Sbjct: 85 VAGGAAVGLGALCYYGLGLSNEIGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIA 144
Query: 559 VFRTPALLNLVARNGWMSIIVTLGLMIGSGM 651
+ RTP L+N + R W++I VT M+G+GM
Sbjct: 145 ISRTPVLMNFMMRGSWVTIGVTFAAMVGAGM 175
>AL603756-2|CAH72661.1| 325|Homo sapiens growth hormone inducible
transmembrane protein protein.
Length = 325
Score = 84.2 bits (199), Expect = 4e-16
Identities = 36/71 (50%), Positives = 53/71 (74%)
Frame = +1
Query: 439 VKPGTLQESHLWPQYVKERIKTTYGYIAGSLVLTAGSAVAVFRTPALLNLVARNGWMSII 618
V G ++++ +WPQYVK+RI +TY Y+AGS+ LTA SA+A+ RTP L+N + R W++I
Sbjct: 85 VAGGAIEKAVIWPQYVKDRIHSTYMYLAGSIGLTALSAIAISRTPVLMNFMMRGSWVTIG 144
Query: 619 VTLGLMIGSGM 651
VT M+G+GM
Sbjct: 145 VTFAAMVGAGM 155
>BC071696-1|AAH71696.1| 498|Homo sapiens FLJ10404 protein protein.
Length = 498
Score = 34.3 bits (75), Expect = 0.38
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 567 SENSNCTTSSQHQRTRDVSICCFYTFF 487
SE S+CT+SS HQR CC+ FF
Sbjct: 71 SERSSCTSSSTHQRDGKFCDCCYCEFF 97
>AY330211-1|AAP92113.1| 605|Homo sapiens netrin 4 protein.
Length = 605
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 411 SCSVLLWLWGKTRYSSGISPLATICERTYKN-NIWIHRGFFGADCW*CSCCFQN 569
SC+ LL LWG T ++G+S +A + R K N + G W + C QN
Sbjct: 3 SCARLLLLWGCTVVAAGLSGVAGVSSRCEKACNPRMGNLALGRKLWADTTCGQN 56
>AF297711-1|AAG53651.1| 628|Homo sapiens netrin 4 precursor
protein.
Length = 628
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 411 SCSVLLWLWGKTRYSSGISPLATICERTYKN-NIWIHRGFFGADCW*CSCCFQN 569
SC+ LL LWG T ++G+S +A + R K N + G W + C QN
Sbjct: 3 SCARLLLLWGCTVVAAGLSGVAGVSSRCEKACNPRMGNLALGRKLWADTTCGQN 56
>AF278532-1|AAG30822.1| 628|Homo sapiens beta-netrin protein.
Length = 628
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 411 SCSVLLWLWGKTRYSSGISPLATICERTYKN-NIWIHRGFFGADCW*CSCCFQN 569
SC+ LL LWG T ++G+S +A + R K N + G W + C QN
Sbjct: 3 SCARLLLLWGCTVVAAGLSGVAGVSSRCEKACNPRMGNLALGRKLWADTTCGQN 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,837,043
Number of Sequences: 237096
Number of extensions: 2146262
Number of successful extensions: 5083
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5081
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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