Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_I12
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88168-4|AAC24402.1| 342|Caenorhabditis elegans Hypothetical pr... 91 5e-19
Z81118-9|CAM84694.1| 208|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 30 1.2
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 30 1.2
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 30 1.2
U21323-2|AAM22051.1| 155|Caenorhabditis elegans Hypothetical pr... 29 2.9
U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF036693-3|AAO61431.1| 544|Caenorhabditis elegans Hypothetical ... 29 2.9
Z93384-4|CAE17903.1| 308|Caenorhabditis elegans Hypothetical pr... 28 5.0
U55369-10|AAK52180.2| 389|Caenorhabditis elegans Hypothetical p... 28 5.0
U21324-19|AAK68224.1| 407|Caenorhabditis elegans C-type lectin ... 28 5.0
AL021492-15|CAE18000.1| 308|Caenorhabditis elegans Hypothetical... 28 5.0
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 28 6.6
AL132864-4|CAB63393.2| 240|Caenorhabditis elegans Hypothetical ... 27 8.7
AF016445-6|AAC69053.1| 250|Caenorhabditis elegans Hypothetical ... 27 8.7
>U88168-4|AAC24402.1| 342|Caenorhabditis elegans Hypothetical
protein K11H12.8a protein.
Length = 342
Score = 91.5 bits (217), Expect = 5e-19
Identities = 50/115 (43%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Frame = +1
Query: 310 RSQPTLRERLMAPAGPNAFXXXXXXXXXXXXXXXXXXCYYGSGVKPGT-LQESHLWPQYV 486
R+ PTL+ERL+ P F YYG K + LQ+S +WP YV
Sbjct: 50 RTGPTLKERLLGPTTGKPFVYGTYALAGASVFGVGALMYYGLVSKEQSILQKSAIWPSYV 109
Query: 487 KERIKTTYGYIAGSLVLTAGSAVAVFRTPALLNLVARNGWMSIIVTLGLMIGSGM 651
+ERI TTY Y+AGSL LTA S VA R+ A++ L A G MS+ T+ MI SGM
Sbjct: 110 RERISTTYAYLAGSLALTAVSGVAASRSAAIMRLTAGGGMMSLFGTMAAMIASGM 164
>Z81118-9|CAM84694.1| 208|Caenorhabditis elegans Hypothetical
protein T10G3.8 protein.
Length = 208
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 244 NFVPRNYVVRNYAREPRTRVATRSQPTLRERLMAP 348
+ VP+N V +N + +PR RV TR P+ +L P
Sbjct: 119 SLVPKNEVKKNASPQPRVRVITRKSPSPLRKLSTP 153
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 30.3 bits (65), Expect = 1.2
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = -2
Query: 612 GHPSISCYQI*KCGCSENSNCTTS-SQHQRTRDVSICCFYTFFHILWPKVRFLKS--TWF 442
GHP IS C C+ N+N T S S H + D +C T R +S WF
Sbjct: 1925 GHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLCEQNT-------DGRHCESCAAWF 1977
Query: 441 YPRAIVAQSN*SNCRGS 391
Y A+ A+ N S+C S
Sbjct: 1978 YGDAVTAK-NCSSCECS 1993
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 30.3 bits (65), Expect = 1.2
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = -2
Query: 612 GHPSISCYQI*KCGCSENSNCTTS-SQHQRTRDVSICCFYTFFHILWPKVRFLKS--TWF 442
GHP IS C C+ N+N T S S H + D +C T R +S WF
Sbjct: 1925 GHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLCEQNT-------DGRHCESCAAWF 1977
Query: 441 YPRAIVAQSN*SNCRGS 391
Y A+ A+ N S+C S
Sbjct: 1978 YGDAVTAK-NCSSCECS 1993
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 30.3 bits (65), Expect = 1.2
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = -2
Query: 612 GHPSISCYQI*KCGCSENSNCTTS-SQHQRTRDVSICCFYTFFHILWPKVRFLKS--TWF 442
GHP IS C C+ N+N T S S H + D +C T R +S WF
Sbjct: 1925 GHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLCEQNT-------DGRHCESCAAWF 1977
Query: 441 YPRAIVAQSN*SNCRGS 391
Y A+ A+ N S+C S
Sbjct: 1978 YGDAVTAK-NCSSCECS 1993
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 30.3 bits (65), Expect = 1.2
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = -2
Query: 612 GHPSISCYQI*KCGCSENSNCTTS-SQHQRTRDVSICCFYTFFHILWPKVRFLKS--TWF 442
GHP IS C C+ N+N T S S H + D +C T R +S WF
Sbjct: 1925 GHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLCEQNT-------DGRHCESCAAWF 1977
Query: 441 YPRAIVAQSN*SNCRGS 391
Y A+ A+ N S+C S
Sbjct: 1978 YGDAVTAK-NCSSCECS 1993
>U21323-2|AAM22051.1| 155|Caenorhabditis elegans Hypothetical
protein C45G9.6b protein.
Length = 155
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 186 VYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRTSNKG 302
V R G CN+ + S +CT + G K+C TSN G
Sbjct: 58 VQRDEGGYCNSNTDCRSGL-YCTASVNGVKICLSTSNGG 95
>U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical
protein C45G9.6a protein.
Length = 542
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 186 VYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRTSNKG 302
V R G CN+ + S +CT + G K+C TSN G
Sbjct: 58 VQRDEGGYCNSNTDCRSGL-YCTASVNGVKICLSTSNGG 95
>AF036693-3|AAO61431.1| 544|Caenorhabditis elegans Hypothetical
protein C49A9.8 protein.
Length = 544
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 142 FKFFLFDTALNYCLLIYCRLGSYYHLKFM-LLADVLT 35
F F L + AL Y +LIY L + H+K + +AD LT
Sbjct: 9 FIFKLLNAALPYKILIYSNLYGHSHIKVLNTVADTLT 45
>Z93384-4|CAE17903.1| 308|Caenorhabditis elegans Hypothetical
protein Y45F10D.15 protein.
Length = 308
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Frame = -1
Query: 163 IRLFQAGFKFFL-FDTALNYCLLIYCRLGS----YYHLKFMLLADVLTR 32
IRLF+ GF FF + + +Y L I+ R+ + +++L +LL R
Sbjct: 66 IRLFKTGFTFFFPLEASQSYLLCIFLRIETTLQYFFNLAHLLLVTYFAR 114
>U55369-10|AAK52180.2| 389|Caenorhabditis elegans Hypothetical
protein C18C4.9 protein.
Length = 389
Score = 28.3 bits (60), Expect = 5.0
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -2
Query: 504 CFYTFFHILWPKVRFLKSTWFYPR 433
C + F H+ P++ F++ TW + R
Sbjct: 190 CIHQFLHLTQPQILFVRKTWNHAR 213
>U21324-19|AAK68224.1| 407|Caenorhabditis elegans C-type lectin
protein 6 protein.
Length = 407
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 402 SWTSCSVLLWLWGKTRYSSGISP 470
SW S SVL WL G T + ISP
Sbjct: 219 SWPSTSVLTWLDGSTSDYNNISP 241
>AL021492-15|CAE18000.1| 308|Caenorhabditis elegans Hypothetical
protein Y45F10D.15 protein.
Length = 308
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Frame = -1
Query: 163 IRLFQAGFKFFL-FDTALNYCLLIYCRLGS----YYHLKFMLLADVLTR 32
IRLF+ GF FF + + +Y L I+ R+ + +++L +LL R
Sbjct: 66 IRLFKTGFTFFFPLEASQSYLLCIFLRIETTLQYFFNLAHLLLVTYFAR 114
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical protein
F40E10.4 protein.
Length = 1410
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +3
Query: 165 INYVITNVYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRT--SNKG-RYTLTTHTSGE 335
IN V N+ ++L N E ++T FC CG CT S KG +H SGE
Sbjct: 1265 INEVPINLQQALE-NVNTEQSCSATVNFCAGIDCGNGKCTNNALSPKGYMCQCDSHFSGE 1323
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +3
Query: 165 INYVITNVYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRT--SNKG-RYTLTTHTSGE 335
IN V N+ ++L N E ++T FC CG CT S KG +H SGE
Sbjct: 1265 INEVPINLQQALE-NVNTEQSCSATVNFCAGIDCGNGKCTNNALSPKGYMCQCDSHFSGE 1323
>AL132864-4|CAB63393.2| 240|Caenorhabditis elegans Hypothetical
protein Y53H1A.2 protein.
Length = 240
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 441 KTRYSSGISPLATICERTYKNNIWIHRGFFGADCW*CSCCFQN 569
KT+++ P ER K++I +HR C C C+Q+
Sbjct: 166 KTKHNCPECPKKYTSERRLKHHIVVHRNPDAYKCQKCGYCYQS 208
>AF016445-6|AAC69053.1| 250|Caenorhabditis elegans Hypothetical
protein T05B4.10 protein.
Length = 250
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/73 (26%), Positives = 29/73 (39%)
Frame = +3
Query: 177 ITNVYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRTSNKGRYTLTTHTSGETHGTCWT 356
+TN L + CN +C ++ CG+ C T+ G T+T+ GTC +
Sbjct: 163 VTNCGNDLSI-CNTVGMQTFVNTYC-QRTCGR--CPSTTASGSVTVTS-------GTCTS 211
Query: 357 KCIQLGQGCIXWS 395
C WS
Sbjct: 212 YIADSSSNCAAWS 224
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,531,156
Number of Sequences: 27780
Number of extensions: 338979
Number of successful extensions: 997
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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