Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_I10
(528 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96; Eukary... 168 8e-41
UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein... 140 1e-32
UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S riboso... 131 1e-29
UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa... 122 5e-27
UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;... 115 8e-25
UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=... 111 1e-23
UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92; Euka... 107 2e-22
UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, wh... 103 3e-21
UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2; ... 95 9e-19
UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2; T... 90 3e-17
UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole gen... 73 4e-12
UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga ... 72 7e-12
UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17; Archa... 69 5e-11
UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera... 69 7e-11
UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum... 68 1e-10
UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1; Sulfol... 68 1e-10
UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lambl... 66 6e-10
UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14; Archa... 63 4e-09
UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1; Os... 60 4e-08
UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1; Encepha... 56 5e-07
UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Or... 52 6e-06
UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2; Thermo... 51 2e-05
UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus Nit... 50 3e-05
UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum... 49 8e-05
UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1; Nanoar... 48 1e-04
UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillar... 46 5e-04
UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9; Euryar... 45 0.001
UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S riboso... 42 0.007
UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9; Bacteri... 41 0.015
UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18; Bacter... 36 0.76
UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11; Bacter... 34 1.8
UniRef50_Q286Z2 Cluster: Putative acetyltransferase; n=1; Phage ... 34 2.3
UniRef50_Q1E1P6 Cluster: Putative uncharacterized protein; n=1; ... 34 2.3
UniRef50_Q9L0C9 Cluster: 50S ribosomal protein L24; n=61; Bacter... 34 2.3
UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome sh... 33 3.1
UniRef50_UPI0000D56304 Cluster: PREDICTED: similar to CG3647-PA,... 33 4.1
UniRef50_A6M1U7 Cluster: Transcriptional regulator, GntR family;... 33 4.1
UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10; Bacter... 33 4.1
UniRef50_UPI0000DB7931 Cluster: PREDICTED: similar to shuttle cr... 33 5.4
UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60; Bacter... 32 7.1
UniRef50_O66981 Cluster: Cytochrome c552; n=1; Aquifex aeolicus|... 32 9.4
UniRef50_A4CYH5 Cluster: Putative uncharacterized protein; n=1; ... 32 9.4
UniRef50_Q22V20 Cluster: Putative uncharacterized protein; n=1; ... 32 9.4
UniRef50_A7RUM4 Cluster: Predicted protein; n=1; Nematostella ve... 32 9.4
>UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96;
Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens
(Human)
Length = 145
Score = 168 bits (408), Expect = 8e-41
Identities = 77/105 (73%), Positives = 92/105 (87%)
Frame = +1
Query: 148 PCSKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANG 327
P SKEL QK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+ VYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 328 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDNGKY 462
T +VGIHPSK VI +LK++KDRK IL+R+AK R +GK+ GKY
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSR--QVGKEKGKY 135
Score = 59.3 bits (137), Expect = 5e-08
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 152
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein
L26 (Silica-induced gene 20 protein) (SIG-20)
(LOC668913), mRNA; n=2; Eutheria|Rep: similar to 60S
ribosomal protein L26 (Silica-induced gene 20 protein)
(SIG-20) (LOC668913), mRNA - Mus musculus
Length = 139
Score = 140 bits (340), Expect = 1e-32
Identities = 67/105 (63%), Positives = 86/105 (81%)
Frame = +1
Query: 148 PCSKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANG 327
P SKEL QK+NV+SMP +KDDEVQVVRGHY+GQQ+GKV+ VYRKK+V+YI++++REKANG
Sbjct: 33 PLSKELRQKYNVQSMPTQKDDEVQVVRGHYEGQQIGKVVQVYRKKYVIYIKQVEREKANG 92
Query: 328 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDNGKY 462
T VGIHPSK VI +LK+ +DRK IL+R+ +GK+ GKY
Sbjct: 93 TTVRVGIHPSKVVITRLKL-EDRKKILERK-------VGKEKGKY 129
Score = 46.4 bits (105), Expect = 4e-04
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 152
MKFN VTS R K HF+APSHI R +MSSPL
Sbjct: 1 MKFNPFVTSDRSMKHKWHFNAPSHILRKIMSSPL 34
>UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S ribosomal
protein L26 (Silica-induced gene 20 protein) (SIG-20);
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: similar to
60S ribosomal protein L26 (Silica-induced gene 20
protein) (SIG-20) - Homo sapiens
Length = 127
Score = 131 bits (316), Expect = 1e-29
Identities = 64/102 (62%), Positives = 80/102 (78%), Gaps = 2/102 (1%)
Frame = +1
Query: 163 LXQKFNVKSMPIRKDDEVQVVR--GHYKGQQVGKVMXVYRKKFVVYIERIQREKANGATA 336
L NV+SMP RKD+EVQVVR GHYKGQQ+G V+ VYRKK+V+YIE +Q+EKANG T
Sbjct: 18 LNAHINVQSMPNRKDNEVQVVRVRGHYKGQQIGTVVQVYRKKYVIYIEWVQQEKANGTTV 77
Query: 337 YVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDNGKY 462
+VGIHPSK VI +LK++KDRK I +++AK A GK+ GKY
Sbjct: 78 HVGIHPSKAVITRLKLDKDRKKIPEQKAKSHQA--GKEKGKY 117
>UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0151300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 122 bits (294), Expect = 5e-27
Identities = 58/90 (64%), Positives = 74/90 (82%)
Frame = +1
Query: 193 PIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIV 372
P+RKDDEVQVVRG YKG++ GKV+ VYR+++V+++ERI REK NG+T VGIHPSK V+
Sbjct: 58 PVRKDDEVQVVRGSYKGRE-GKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVT 116
Query: 373 KLKMNKDRKAILDRRAKGRLAALGKDNGKY 462
KLK++KDRKAILDR+A GR A K GK+
Sbjct: 117 KLKLDKDRKAILDRKASGR--AADKAKGKF 144
>UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;
Trichocomaceae|Rep: Contig An11c0300, complete genome -
Aspergillus niger
Length = 134
Score = 115 bits (276), Expect = 8e-25
Identities = 56/100 (56%), Positives = 73/100 (73%)
Frame = +1
Query: 148 PCSKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANG 327
P S EL K+NV+SMPIRKDDEV VVRG KG++ GKV VYR K+ +++ERI R+K+NG
Sbjct: 34 PLSSELRAKYNVRSMPIRKDDEVMVVRGSNKGRE-GKVTSVYRLKWAIHVERISRDKSNG 92
Query: 328 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 447
+ + +HPS VI KL ++KDR+AIL+R KGR A K
Sbjct: 93 QSVPIPLHPSNVVIKKLHLDKDREAILERVGKGREAVKAK 132
Score = 41.9 bits (94), Expect = 0.009
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 60 NKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 152
N + SSRRK+R HF+APS RRV++S+PL
Sbjct: 5 NSSLASSRRKSRAAHFNAPSSERRVILSAPL 35
>UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L26, putative -
Plasmodium vivax
Length = 156
Score = 111 bits (266), Expect = 1e-23
Identities = 47/89 (52%), Positives = 70/89 (78%)
Frame = +1
Query: 154 SKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANGAT 333
SKEL K+ +++P+RKDDEV + RGH G++ GKV+ + RK+F +Y+ER+ REKANG +
Sbjct: 64 SKELRLKYKTRALPVRKDDEVLICRGHNHGRE-GKVVKINRKRFKIYVERVTREKANGES 122
Query: 334 AYVGIHPSKCVIVKLKMNKDRKAILDRRA 420
++GIHPS ++ KLK++K+RK ILDR+A
Sbjct: 123 TFIGIHPSNVILTKLKIDKNRKKILDRKA 151
Score = 56.0 bits (129), Expect = 5e-07
Identities = 23/46 (50%), Positives = 37/46 (80%)
Frame = +3
Query: 15 VLSRVVLAKSDRMKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 152
+L++++ + +MKFNKQ++S+RRK RK HF+AP+ +RR +MSS L
Sbjct: 18 LLTQIIFSPFSKMKFNKQISSARRKMRKAHFTAPAGLRRKIMSSKL 63
>UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92;
Eukaryota|Rep: 60S ribosomal protein L26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 127
Score = 107 bits (257), Expect = 2e-22
Identities = 49/95 (51%), Positives = 71/95 (74%)
Frame = +1
Query: 148 PCSKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANG 327
P SKEL ++ +K++PIR+DDEV VVRG KGQ+ GK+ VYR KF V ++++ +EK NG
Sbjct: 34 PLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQE-GKISSVYRLKFAVQVDKVTKEKVNG 92
Query: 328 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRL 432
A+ + +HPSK VI KL ++KDRKA++ R+ G+L
Sbjct: 93 ASVPINLHPSKLVITKLHLDKDRKALIQRKG-GKL 126
Score = 39.5 bits (88), Expect = 0.047
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +3
Query: 54 KFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 152
K + V+S RRK RK +F+APS RRVL+S+PL
Sbjct: 3 KQSLDVSSDRRKARKAYFTAPSSQRRVLLSAPL 35
>UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 144
Score = 103 bits (246), Expect = 3e-21
Identities = 47/98 (47%), Positives = 71/98 (72%)
Frame = +1
Query: 154 SKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANGAT 333
SK+L +K+NV+++P+RKDDEV VVRG +KG + GKV VYRK++ + IE++ R KANG
Sbjct: 35 SKDLRKKYNVRALPVRKDDEVTVVRGTHKGTK-GKVSSVYRKRWTIQIEKLTRTKANGMP 93
Query: 334 AYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 447
+ I S+C+I K +N+DRK +L R+A +++ GK
Sbjct: 94 YQIPIRASQCIITKPYLNEDRKQLLARKASAKVSTKGK 131
Score = 33.9 bits (74), Expect = 2.3
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 152
MK + +V+S RRK R+ APS++R LMS+ L
Sbjct: 1 MKTHVEVSSQRRKGRRAQLGAPSNLRYKLMSAHL 34
>UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L26 - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 95.1 bits (226), Expect = 9e-19
Identities = 45/92 (48%), Positives = 65/92 (70%)
Frame = +1
Query: 154 SKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANGAT 333
SKEL +K+NV ++PI KDDEV++++GH K GKV V R K+V+ I+++ + KANG T
Sbjct: 35 SKELREKYNVIAIPIHKDDEVKIIKGHQK--VAGKVTAVRRSKYVINIDKLTKTKANGQT 92
Query: 334 AYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 429
V I PS +I KL +NKDR+A L ++A+ R
Sbjct: 93 VPVAIRPSNVIITKLFLNKDREAYLAKKAESR 124
Score = 32.7 bits (71), Expect = 5.4
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 152
MKFN +V+S+ K RK ++AP+ R +LMS+ L
Sbjct: 1 MKFNCKVSSNPSKARKALYTAPASQRAILMSARL 34
>UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24,
putative - Trichomonas vaginalis G3
Length = 138
Score = 90.2 bits (214), Expect = 3e-17
Identities = 42/98 (42%), Positives = 62/98 (63%)
Frame = +1
Query: 154 SKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANGAT 333
+KE + VK +PIR+DDEV + G + G++ GKV+ V + + ++ REK NG T
Sbjct: 36 NKEQAETHGVKQLPIRRDDEVSINSGKFAGRE-GKVIAVKLSENRIVVDSFTREKLNGQT 94
Query: 334 AYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGK 447
+V +HPS C+I KLKM+K RK +++RR GR L K
Sbjct: 95 VHVSVHPSNCLITKLKMDKQRKELIERRRAGREKILAK 132
>UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 119
Score = 72.9 bits (171), Expect = 4e-12
Identities = 38/72 (52%), Positives = 51/72 (70%)
Frame = +1
Query: 103 ISVLLHI*GEC*CPLPCSKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKK 282
++ LLH E P S L K+NV+SMPIRKDDEVQVVRG +KG++ GKV+ VY +K
Sbjct: 36 LTPLLHGVIELLMSAPLSTNLRSKYNVRSMPIRKDDEVQVVRGTFKGRE-GKVVQVYCQK 94
Query: 283 FVVYIERIQREK 318
V++++RI EK
Sbjct: 95 RVIHVKRISHEK 106
>UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L24 -
Caldivirga maquilingensis IC-167
Length = 143
Score = 72.1 bits (169), Expect = 7e-12
Identities = 38/100 (38%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Frame = +1
Query: 148 PCSKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANG 327
P SK+L ++ ++ +P+R D V ++RG +KG + GKV V K+ +Y++ +K +G
Sbjct: 32 PLSKDLQRQLGIRRIPVRVGDTVLILRGDFKGTR-GKVTRVDYKRVRIYVDSASFKKPSG 90
Query: 328 ATAYVGIHPSKCVIVKL-KMNKDRKAILDRRAKGRLAALG 444
Y IHPSK VIV+L + +K R A +D+ K R A G
Sbjct: 91 EAVYYPIHPSKVVIVELDQSDKARVAAIDKTRKAREAKAG 130
>UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17;
Archaea|Rep: 50S ribosomal protein L24P - Methanopyrus
kandleri
Length = 149
Score = 69.3 bits (162), Expect = 5e-11
Identities = 33/86 (38%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +1
Query: 160 ELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANGATAY 339
EL +KFN +S+P+R+ D V+++RG +KG + G+V+ V K+ +Y+E E+ANG Y
Sbjct: 35 ELRKKFNRRSLPVRRGDMVRIMRGDFKGHE-GEVVEVDLKRLRIYVEGATIERANGEKVY 93
Query: 340 VGIHPSKCVIVKLKMNKD-RKAILDR 414
IHPS +I++ ++ R+ I++R
Sbjct: 94 YPIHPSNVMIIEPNLDDPMRRKIIER 119
>UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera
sedula DSM 5348|Rep: KOW domain protein - Metallosphaera
sedula DSM 5348
Length = 111
Score = 68.9 bits (161), Expect = 7e-11
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +1
Query: 148 PCSKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANG 327
P S EL +++ +K + IRKDD V+V+RG G + GKV V+ + + IE + R+KA+G
Sbjct: 9 PLSDELAKEYGMKRIGIRKDDTVRVMRGDNYGFE-GKVTQVFPESGRIAIEGLTRKKADG 67
Query: 328 ATAYVGIHPSKCVIVKLKMNKD-RKAILDRRA 420
Y+ IH SK I KL N RK I++R+A
Sbjct: 68 TPVYIKIHASKVEITKLNTNDPRRKDIINRKA 99
>UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L24 - Thermofilum
pendens (strain Hrk 5)
Length = 131
Score = 68.1 bits (159), Expect = 1e-10
Identities = 37/92 (40%), Positives = 52/92 (56%)
Frame = +1
Query: 148 PCSKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANG 327
P S EL QK +K + +RK D V +VRG +KG + GKV V KK +++E KA+G
Sbjct: 32 PLSAELQQKLGIKRIRVRKGDRVLIVRGSFKGHE-GKVTSVDVKKGRIHVEGATLRKADG 90
Query: 328 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAK 423
IHPSK V+ +L ++ R+ L R K
Sbjct: 91 TEVPFPIHPSKVVVTELDLSDPRRKELVERKK 122
>UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1;
Sulfolobus acidocaldarius|Rep: 50S ribosomal protein
L24P - Sulfolobus acidocaldarius
Length = 134
Score = 68.1 bits (159), Expect = 1e-10
Identities = 38/103 (36%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Frame = +1
Query: 154 SKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANGAT 333
S++L +++ +K + IRK D V+++RG G + GKV+ V RK+ V IE + ++KA+G
Sbjct: 30 SEDLEKQYGIKRISIRKGDSVKLMRGSQVGYE-GKVVEVDRKRGRVAIEGLTKKKADGTP 88
Query: 334 AYVGIHPSKCVIVKLKM-NKDRKAILDRRAKGRLAALGKDNGK 459
YV +H SK +I KL +K+R ++R+ K R K + K
Sbjct: 89 VYVWVHASKVIITKLDTGDKERMDAIERKRKMREEYFSKKSPK 131
>UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_22147_22554 - Giardia lamblia
ATCC 50803
Length = 135
Score = 65.7 bits (153), Expect = 6e-10
Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Frame = +1
Query: 154 SKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANGAT 333
SKEL + +K+MPIR+ D V++ G +KG GKV+ V R+ + + +E I ++ N
Sbjct: 35 SKELRAEHKIKTMPIRRGDIVEIFTGGHKG--TGKVVEVRRRDYKICVEGINQKARNPEA 92
Query: 334 AYV--GIHPSKCVIVKLKMNKDRKAILDRRAK---GRLAALGK 447
V IHPS C+I +L MN R + RR + RLA +GK
Sbjct: 93 KPVPYPIHPSNCIIKELYMNGSRYRAIKRRQERNAERLARIGK 135
Score = 36.3 bits (80), Expect = 0.44
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 152
MK N VT+SRRK RK +F+A + R +MSS L
Sbjct: 1 MKLNSAVTASRRKCRKAYFTANAETRAKMMSSRL 34
>UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14;
Archaea|Rep: 50S ribosomal protein L24P - Methanococcus
jannaschii
Length = 120
Score = 62.9 bits (146), Expect = 4e-09
Identities = 31/82 (37%), Positives = 52/82 (63%)
Frame = +1
Query: 154 SKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANGAT 333
SKEL +K ++P+RK D V+++RG +KG + G+V+ V K++ +Y+E ++ +G
Sbjct: 33 SKELKEKLGKNAIPVRKGDVVRIMRGDFKGLE-GEVIKVDLKRYRIYVEGANNKRQDGRE 91
Query: 334 AYVGIHPSKCVIVKLKMNKDRK 399
IHPS +I+KL +KD K
Sbjct: 92 VPYPIHPSNVMIIKL-YDKDEK 112
>UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative L24 ribosomal protein -
Ostreococcus tauri
Length = 154
Score = 59.7 bits (138), Expect = 4e-08
Identities = 28/58 (48%), Positives = 41/58 (70%)
Frame = +1
Query: 154 SKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANG 327
S EL + ++PIR +DEV+V RG +K ++ GKV+ VYRKK+V++I I R+K NG
Sbjct: 54 SAELKAQHGANAVPIRVNDEVRVTRGSFKNRE-GKVVQVYRKKWVIHIANITRDKVNG 110
Score = 47.2 bits (107), Expect = 2e-04
Identities = 28/47 (59%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
Frame = +3
Query: 21 SRVVLAKSDR---MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 152
+RV LA S R MK++ VTSSRRK RK HF+APS RR LMS+ L
Sbjct: 7 TRVRLAVSLRRHAMKYSTAVTSSRRKTRKAHFTAPSSERRKLMSAAL 53
>UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L26
- Encephalitozoon cuniculi
Length = 143
Score = 56.0 bits (129), Expect = 5e-07
Identities = 30/92 (32%), Positives = 50/92 (54%)
Frame = +1
Query: 154 SKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANGAT 333
S+EL +++ ++ P+R D V V G + G++ G + + + + VYIE K +G
Sbjct: 36 SRELRKEYGFRTFPLRTGDTVVVKGGKFDGKE-GVISKINYRDYKVYIEGCFVTKNDGTN 94
Query: 334 AYVGIHPSKCVIVKLKMNKDRKAILDRRAKGR 429
A V I+PSK I K + RK L+R+ + R
Sbjct: 95 ALVPIYPSKLTITKFFLENGRKEQLERKKRAR 126
>UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein L26 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 52.4 bits (120), Expect = 6e-06
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +1
Query: 154 SKELXQKFNVKSMPIRKDDEVQVVRGHYKG 243
S EL K+NV+S+PIRKDDEVQVVRG YKG
Sbjct: 35 SSELRHKYNVRSIPIRKDDEVQVVRGSYKG 64
Score = 50.0 bits (114), Expect = 3e-05
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 152
MK N +VTSSRRK RK HF+APS +RRVLMS+ L
Sbjct: 1 MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAAL 34
>UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2;
Thermoplasma|Rep: 50S ribosomal protein L24P -
Thermoplasma volcanium
Length = 145
Score = 50.8 bits (116), Expect = 2e-05
Identities = 30/82 (36%), Positives = 44/82 (53%)
Frame = +1
Query: 154 SKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANGAT 333
SK+L +K+ ++S PI K D V+VV G KG+ GKV V +V +E I K +G
Sbjct: 10 SKDLRKKYGIRSFPIVKGDVVKVVSGARKGEG-GKVAEVDHHSGLVIVEGITIAKIDGKQ 68
Query: 334 AYVGIHPSKCVIVKLKMNKDRK 399
GI P K I L +++ +
Sbjct: 69 KGFGISPEKLQITHLDLSRSER 90
>UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: KOW domain protein -
Candidatus Nitrosopumilus maritimus SCM1
Length = 168
Score = 50.0 bits (114), Expect = 3e-05
Identities = 27/75 (36%), Positives = 42/75 (56%)
Frame = +1
Query: 154 SKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANGAT 333
SK+L +K+ +S+ + + D V ++RG +KG GKV V K V IE +++EK G
Sbjct: 28 SKDLQKKYGKRSVRVNEGDSVTILRGEFKGVD-GKVAEVSTAKSSVAIEGVKKEKTKGDK 86
Query: 334 AYVGIHPSKCVIVKL 378
V IH S ++ L
Sbjct: 87 FDVFIHTSNLLVTSL 101
>UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24 - Cenarchaeum
symbiosum
Length = 167
Score = 48.8 bits (111), Expect = 8e-05
Identities = 32/77 (41%), Positives = 41/77 (53%)
Frame = +1
Query: 148 PCSKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANG 327
P SKEL K+ +S+ + + D V VVRG YK GKV V + V IE I++EK G
Sbjct: 26 PLSKELRAKYGKRSVRVVEGDTVSVVRGEYKDID-GKVSHVDTESGSVAIEGIKKEKGKG 84
Query: 328 ATAYVGIHPSKCVIVKL 378
V I SK V+ L
Sbjct: 85 DKFDVLIRASKVVVTGL 101
>UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L24P -
Nanoarchaeum equitans
Length = 140
Score = 48.4 bits (110), Expect = 1e-04
Identities = 28/84 (33%), Positives = 52/84 (61%)
Frame = +1
Query: 148 PCSKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANG 327
P SKEL +K ++++PI+ D V+V RG+++G++ G+V+ + K + VY+ + ++
Sbjct: 44 PLSKELREKLGIRNVPIKVGDVVRVERGNFRGKE-GQVIDIDPKYYRVYLS-LDTDR--- 98
Query: 328 ATAYVGIHPSKCVIVKLKMNKDRK 399
HPSK I+KL ++ D+K
Sbjct: 99 ---QYPFHPSKLTIIKLDLS-DKK 118
>UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillardia
theta|Rep: 60S ribosomal protein L26 - Guillardia theta
(Cryptomonas phi)
Length = 108
Score = 46.0 bits (104), Expect = 5e-04
Identities = 22/75 (29%), Positives = 45/75 (60%)
Frame = +1
Query: 154 SKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANGAT 333
SKE+ + K++ ++K+ E++V RG +KG + GKV+ + ++ ++++ I R K
Sbjct: 35 SKEMQKYHKKKTLILKKNYEIKVKRGDFKG-KTGKVIQIKPEQQKIFVDNIFRNKFEKTN 93
Query: 334 AYVGIHPSKCVIVKL 378
+V + PS I+K+
Sbjct: 94 IFVPLKPSNIQIIKI 108
>UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 122
Score = 45.2 bits (102), Expect = 0.001
Identities = 24/83 (28%), Positives = 44/83 (53%)
Frame = +1
Query: 154 SKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANGAT 333
S+ L +++ +S + D V+++RG +KG + GKV V + ++ + K +G
Sbjct: 36 SEALAKQYGTRSAAVITGDTVKIMRGDFKGTE-GKVQSVSLMDGTIAVDGVISTKVDGTE 94
Query: 334 AYVGIHPSKCVIVKLKMNKDRKA 402
I+PS +I KL+M R+A
Sbjct: 95 VPRPINPSNVMITKLEMKDGRRA 117
>UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S ribosomal
protein L26-like 1; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L26-like 1 -
Canis familiaris
Length = 165
Score = 42.3 bits (95), Expect = 0.007
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSP 149
M FN +T NRKRH +APSH+RR +MSSP
Sbjct: 97 MNFNPFLTWGCSTNRKRHVNAPSHVRRNIMSSP 129
>UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9;
Bacteria|Rep: 50S ribosomal protein L24 - Desulfovibrio
desulfuricans (strain G20)
Length = 107
Score = 41.1 bits (92), Expect = 0.015
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +1
Query: 181 VKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREK 318
+K IRKDD+V V+ G KG ++GKV+ V RKK V +E++ K
Sbjct: 1 MKQFRIRKDDKVMVISGKDKG-KIGKVLKVLRKKDRVLVEKVNVAK 45
>UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18;
Bacteria|Rep: 50S ribosomal protein L24 - Thermus
thermophilus
Length = 110
Score = 35.5 bits (78), Expect = 0.76
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 190 MPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERI 306
M ++K D V V G YKG +VGKV V KK+ V +E +
Sbjct: 5 MHVKKGDTVLVASGKYKG-RVGKVKEVLPKKYAVIVEGV 42
>UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11;
Bacteria|Rep: 50S ribosomal protein L24 - Leptospira
interrogans
Length = 119
Score = 34.3 bits (75), Expect = 1.8
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +1
Query: 184 KSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREK 318
K I+K+DEV + G +KG++ GKV+ + +K+ V +E + + K
Sbjct: 15 KKFRIKKNDEVICITGKHKGKR-GKVLSIDKKRDRVIVEGLNKRK 58
>UniRef50_Q286Z2 Cluster: Putative acetyltransferase; n=1; Phage
phiV10|Rep: Putative acetyltransferase - Phage phiV10
Length = 338
Score = 33.9 bits (74), Expect = 2.3
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Frame = -1
Query: 402 CFAVF-IHLQLDNHTL*RVNADICCCTIGLFSLNPL--NVYNKL----FTIHXHHFANL- 247
CF VF I+ + N T+ + I CT+G++ ++PL ++ + ++IH F +
Sbjct: 254 CFMVFMINTPVKNKTILHIVKFISPCTLGIYLVHPLIIDILRRFLLDKYSIHPEMFIVIP 313
Query: 246 LAFVVSTYNLNFIVFANRHG 187
L+F+V +L +VF + G
Sbjct: 314 LSFIVFLISLAIVVFLRKFG 333
>UniRef50_Q1E1P6 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 2137
Score = 33.9 bits (74), Expect = 2.3
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 175 FNVKSMPIRKDDEVQVVRGHY-KGQQVGKVMXVYRKKFVVYIERIQREKANGATAY 339
+ V MP++ E +++G Y K Q + ++F Y+ER EKA+ A+ Y
Sbjct: 88 YTVNPMPLKPSPEKSLIKGQYHKRMQSFQNATTNSREFASYLERRSPEKAHRASVY 143
>UniRef50_Q9L0C9 Cluster: 50S ribosomal protein L24; n=61;
Bacteria|Rep: 50S ribosomal protein L24 - Streptomyces
coelicolor
Length = 107
Score = 33.9 bits (74), Expect = 2.3
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +1
Query: 190 MPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREK 318
M I+K D VQV+ G KG+Q GKV+ + ++ V +E + R K
Sbjct: 1 MKIKKGDLVQVITGKDKGKQ-GKVIAAFPREDRVLVEGVNRVK 42
>UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 2
SCAF14705, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2759
Score = 33.5 bits (73), Expect = 3.1
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 505 YLFKRPPWLWQFPRCIYRCLCQVQPVCPLLCDRGLLCG 392
YL P W W FP + R +Q +CP DR L CG
Sbjct: 2559 YLMNNPSWSWVFPPDLLR----LQRMCPEKMDRFLCCG 2592
>UniRef50_UPI0000D56304 Cluster: PREDICTED: similar to CG3647-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG3647-PA, isoform A - Tribolium castaneum
Length = 958
Score = 33.1 bits (72), Expect = 4.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 466 RCIYRCLCQVQPVCPLLCDRGLLCG 392
RC RC +++ +CPL C+ L CG
Sbjct: 540 RCNQRCCIEIEHICPLPCNHMLACG 564
>UniRef50_A6M1U7 Cluster: Transcriptional regulator, GntR family;
n=1; Clostridium beijerinckii NCIMB 8052|Rep:
Transcriptional regulator, GntR family - Clostridium
beijerinckii NCIMB 8052
Length = 235
Score = 33.1 bits (72), Expect = 4.1
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 145 LPCSKELXQKFNVKSMPIRKDDEVQVVRGH-YKGQQVGKVMXVYRKKFVVYIERI 306
LP +EL +KFNV IRK E+ V +G+ Y+ Q G + + K I I
Sbjct: 27 LPTEEELIKKFNVSKNTIRKAIEILVTKGYVYRVQGSGIFLREFAKNGCAQIRDI 81
>UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10;
Bacteria|Rep: 50S ribosomal protein L24 - Aquifex
aeolicus
Length = 132
Score = 33.1 bits (72), Expect = 4.1
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +1
Query: 196 IRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANGATAYV 342
I+K D V VVRG KG+Q GKV+ VY ER++R G YV
Sbjct: 6 IKKGDTVLVVRGKEKGKQ-GKVLKVY--------ERVKRRDKQGNPVYV 45
>UniRef50_UPI0000DB7931 Cluster: PREDICTED: similar to shuttle craft
CG3647-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to shuttle craft CG3647-PA, isoform A
- Apis mellifera
Length = 1087
Score = 32.7 bits (71), Expect = 5.4
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -3
Query: 466 RCIYRCLCQVQPVCPLLCDRGLLCGLYSSST*QSHTLKGECR 341
+C C +++ +CPL+C + L CG + + KG C+
Sbjct: 652 KCNQLCCIEIEHICPLICSKTLSCGRHKC---EQRCHKGRCQ 690
>UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60;
Bacteria|Rep: 50S ribosomal protein L24 - Rickettsia
prowazekii
Length = 113
Score = 32.3 bits (70), Expect = 7.1
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +1
Query: 190 MPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREK 318
+ ++K DEV ++ G YKG++ GKV+ V+ ++ V + + K
Sbjct: 4 LKVKKGDEVVIITGKYKGKK-GKVLKVFPEENTVVVSGVNLVK 45
>UniRef50_O66981 Cluster: Cytochrome c552; n=1; Aquifex
aeolicus|Rep: Cytochrome c552 - Aquifex aeolicus
Length = 166
Score = 31.9 bits (69), Expect = 9.4
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = +2
Query: 38 EERQNEVQQAGDFLKKEKQEEAFQ---CSFTYKASVDVLSPALR 160
+E Q +V QAG EK + FQ C F ++ +VD + P+L+
Sbjct: 64 QEEQKQVAQAGGAGNPEKGKAIFQQKGCGFCHQPAVDTVGPSLK 107
>UniRef50_A4CYH5 Cluster: Putative uncharacterized protein; n=1;
Synechococcus sp. WH 7805|Rep: Putative uncharacterized
protein - Synechococcus sp. (strain WH7805)
Length = 260
Score = 31.9 bits (69), Expect = 9.4
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -1
Query: 492 GLHGCGSFLGVFTVVFAKCSQSALCSAIEDCFAVFIHLQLDNHTL 358
GL GCG F FT + K + A S +D F+ F+ L ++ +
Sbjct: 68 GLDGCGKFFRSFTKLHPKSASLAYGSKSKDSFSYFLDFTLSHNLI 112
>UniRef50_Q22V20 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 852
Score = 31.9 bits (69), Expect = 9.4
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 199 RKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKAN 324
R+D EVQ++R Y Q V K++ +K + +ER++ EK N
Sbjct: 705 RRDQEVQIIRNQY-DQSVEKIL---HQKNAIDVERLENEKYN 742
>UniRef50_A7RUM4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 395
Score = 31.9 bits (69), Expect = 9.4
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Frame = +1
Query: 169 QKFNVKSMPIRKD--DEVQVVRGHYKGQ--QVGKVMXVYRKKFVVYIE--RIQREKANGA 330
QKF+ M R+D D + VV K Q ++ + ++V +E RI +EKA A
Sbjct: 289 QKFD-NDMGERQDEFDALDVVYTEEKKQLQELEERFKTLEAEYVQIVEERRIAKEKAEAA 347
Query: 331 TAYVG--IHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDNGK 459
+ I ++ + + +K RKA+ ++ KG+ GK +GK
Sbjct: 348 ERELNLKIRAARLIQAMWRAHKARKALQKKKKKGKKGKKGKKSGK 392
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,164,724
Number of Sequences: 1657284
Number of extensions: 9883103
Number of successful extensions: 25922
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 25003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25885
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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