Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_I10
         (528 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        26   0.90 
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        26   0.90 
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        26   0.90 
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        26   0.90 
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    26   0.90 
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    25   1.6  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   4.8  

>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.8 bits (54), Expect = 0.90
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = -1

Query: 501 CLRGLHGCG-SFLGVFTVVFAKCSQSALCSAIEDCFAVFIH 382
           C  G   C  SF G F        Q ALCS+ EDC    +H
Sbjct: 42  CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 81


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.8 bits (54), Expect = 0.90
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = -1

Query: 501 CLRGLHGCG-SFLGVFTVVFAKCSQSALCSAIEDCFAVFIH 382
           C  G   C  SF G F        Q ALCS+ EDC    +H
Sbjct: 42  CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 81


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.8 bits (54), Expect = 0.90
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = -1

Query: 501 CLRGLHGCG-SFLGVFTVVFAKCSQSALCSAIEDCFAVFIH 382
           C  G   C  SF G F        Q ALCS+ EDC    +H
Sbjct: 42  CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 81


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.8 bits (54), Expect = 0.90
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = -1

Query: 501 CLRGLHGCG-SFLGVFTVVFAKCSQSALCSAIEDCFAVFIH 382
           C  G   C  SF G F        Q ALCS+ EDC    +H
Sbjct: 42  CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 81


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 25.8 bits (54), Expect = 0.90
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = -1

Query: 501 CLRGLHGCG-SFLGVFTVVFAKCSQSALCSAIEDCFAVFIH 382
           C  G   C  SF G F        Q ALCS+ EDC    +H
Sbjct: 618 CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 657


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 152 QGRGHQHSPYM*RSTEMPLPVFPS*G 75
           Q  GH HS    +S  +P+PVF   G
Sbjct: 150 QAAGHLHSSVSEKSKTVPVPVFQKVG 175


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 327 CNSICRHSPFKVCDCQVE 380
           C ++C    F  CDC++E
Sbjct: 740 CFALCHCCDFYACDCKME 757


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 537,952
Number of Sequences: 2352
Number of extensions: 11410
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)