Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_I10
(528 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68315-8|CAA92674.1| 142|Caenorhabditis elegans Hypothetical pr... 122 2e-28
Z68315-10|CAD59149.1| 109|Caenorhabditis elegans Hypothetical p... 92 3e-19
Z68315-9|CAA92678.1| 106|Caenorhabditis elegans Hypothetical pr... 92 3e-19
Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical p... 31 0.67
Z98877-13|CAB63410.2| 254|Caenorhabditis elegans Hypothetical p... 29 2.1
Z98877-2|CAB11570.1| 907|Caenorhabditis elegans Hypothetical pr... 29 2.1
>Z68315-8|CAA92674.1| 142|Caenorhabditis elegans Hypothetical
protein F28C6.7a protein.
Length = 142
Score = 122 bits (294), Expect = 2e-28
Identities = 55/105 (52%), Positives = 79/105 (75%)
Frame = +1
Query: 148 PCSKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANG 327
P +KEL K ++++PIR DDEV V+RG +KG G+V+ YRKKFV++I++I REKANG
Sbjct: 33 PLTKELRTKHGIRAIPIRTDDEVVVMRGRHKGN-TGRVLRCYRKKFVIHIDKITREKANG 91
Query: 328 ATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDNGKY 462
+T ++GIHPSK I KLK++KDR+A+++R+A GR G GK+
Sbjct: 92 STVHIGIHPSKVAITKLKLDKDRRALVERKAAGRSRVTGILKGKH 136
Score = 43.6 bits (98), Expect = 9e-05
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLL*GTXTK 173
MK N V+S K+RK HF+APSH RR +MS+PL TK
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTK 41
>Z68315-10|CAD59149.1| 109|Caenorhabditis elegans Hypothetical
protein F28C6.7c protein.
Length = 109
Score = 91.9 bits (218), Expect = 3e-19
Identities = 40/71 (56%), Positives = 56/71 (78%)
Frame = +1
Query: 148 PCSKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANG 327
P +KEL K ++++PIR DDEV V+RG +KG G+V+ YRKKFV++I++I REKANG
Sbjct: 33 PLTKELRTKHGIRAIPIRTDDEVVVMRGRHKGN-TGRVLRCYRKKFVIHIDKITREKANG 91
Query: 328 ATAYVGIHPSK 360
+T ++GIHPSK
Sbjct: 92 STVHIGIHPSK 102
Score = 43.6 bits (98), Expect = 9e-05
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLL*GTXTK 173
MK N V+S K+RK HF+APSH RR +MS+PL TK
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTK 41
>Z68315-9|CAA92678.1| 106|Caenorhabditis elegans Hypothetical
protein F28C6.7b protein.
Length = 106
Score = 91.9 bits (218), Expect = 3e-19
Identities = 40/71 (56%), Positives = 56/71 (78%)
Frame = +1
Query: 148 PCSKELXQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIERIQREKANG 327
P +KEL K ++++PIR DDEV V+RG +KG G+V+ YRKKFV++I++I REKANG
Sbjct: 33 PLTKELRTKHGIRAIPIRTDDEVVVMRGRHKGN-TGRVLRCYRKKFVIHIDKITREKANG 91
Query: 328 ATAYVGIHPSK 360
+T ++GIHPSK
Sbjct: 92 STVHIGIHPSK 102
Score = 43.6 bits (98), Expect = 9e-05
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLL*GTXTK 173
MK N V+S K+RK HF+APSH RR +MS+PL TK
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTK 41
>Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical
protein Y69H2.11 protein.
Length = 887
Score = 30.7 bits (66), Expect = 0.67
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Frame = +1
Query: 130 EC*CPLPCSKE----LXQKFNVKSMPI--RKDDEVQVVRGHYKGQQVGKVMXVYRKKFVV 291
+C CPLPCS + K N ++PI K +V + HY Q + ++ + + F +
Sbjct: 778 DCVCPLPCSNQEYSVTWSKANFVNLPIICGKSSDVSTCKAHYIDQLMVSIV-LPQLDFKI 836
Query: 292 YIE 300
Y E
Sbjct: 837 YAE 839
>Z98877-13|CAB63410.2| 254|Caenorhabditis elegans Hypothetical
protein Y69H2.13 protein.
Length = 254
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Frame = +1
Query: 133 C*CPLPCSKE----LXQKFNVKSMPI--RKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVY 294
C CPLPCS + K N +MPI K +V + +Y Q + ++ + + F +Y
Sbjct: 149 CVCPLPCSNQEYSVTWSKANFVNMPITCEKSSDVATCQANYVDQLMVSIV-LPKLDFQIY 207
Query: 295 IE 300
E
Sbjct: 208 AE 209
>Z98877-2|CAB11570.1| 907|Caenorhabditis elegans Hypothetical
protein Y69H2.2 protein.
Length = 907
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Frame = +1
Query: 133 C*CPLPCSKE----LXQKFNVKSMPI--RKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVY 294
C CPLPCS + K N ++PI K +V + YK Q + ++ + + F +Y
Sbjct: 799 CVCPLPCSNQEYSVTWSKANFVNLPITCEKSSDVATCQKQYKDQLMVSII-LPQLDFKIY 857
Query: 295 IE 300
E
Sbjct: 858 AE 859
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,855,967
Number of Sequences: 27780
Number of extensions: 255166
Number of successful extensions: 706
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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