Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_I04
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.9  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   3.8  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   5.0  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   5.0  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   5.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.0  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -1

Query: 167 LNHWKKFIDIFKLLYW 120
           +NH KKFI+  KLL W
Sbjct: 5   INH-KKFINTTKLLLW 19


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +1

Query: 358 VGCLSLAVELSPDNESSKKNMRQEIE 435
           V CL      SPD    KKNM   IE
Sbjct: 49  VDCLLEKGRCSPDGLELKKNMPDAIE 74


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 540 TVVSTKCICQIYQLISC 490
           TV+S + +C  Y ++ C
Sbjct: 237 TVISWQAVCTFYNILLC 253


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 540 TVVSTKCICQIYQLISC 490
           TV+S + +C  Y ++ C
Sbjct: 237 TVISWQAVCTFYNILLC 253


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 537 VVSTKCICQIYQLISCQFYIYSC 469
           +VS   + Q+ QL+   F IY C
Sbjct: 225 LVSLALLMQLTQLVPALFVIYLC 247


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 540 TVVSTKCICQIYQLISC 490
           TV+S + +C  Y ++ C
Sbjct: 557 TVISWQAVCTFYNILLC 573


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 330 LHFIYYFPTILNTSHF 283
           +H ++Y P I+ T HF
Sbjct: 81  VHLLFYCPFIIFTVHF 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,117
Number of Sequences: 336
Number of extensions: 2736
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)