Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_I03
(494 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0319 - 16712572-16712654,16712756-16712797,16713955-167142... 163 9e-41
03_01_0276 + 2124538-2124550,2124678-2124962,2126813-2126854,212... 163 9e-41
02_05_1201 + 34929577-34929589,34930252-34930587,34931378-349314... 163 9e-41
12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845 54 5e-08
03_05_0291 - 22837412-22838128 29 1.6
01_01_0098 + 744582-745380,746107-746130,746500-747569 29 2.1
07_03_0263 - 15951011-15951818,15952009-15952526,15952949-159531... 29 2.7
05_05_0020 - 21560896-21561352,21563399-21563480,21564143-215642... 29 2.7
03_06_0296 + 32901696-32901892,32901989-32902232,32903992-329041... 29 2.7
02_02_0500 - 10993675-10994067,10994434-10995738 29 2.7
07_03_1014 + 23304245-23304465,23304560-23304597,23304691-233049... 28 4.7
06_03_0025 - 15577231-15577420,15577682-15577813,15578025-155781... 28 4.7
05_04_0098 + 17982196-17982355,17982761-17982978,17983232-179834... 28 4.7
11_06_0538 + 24759030-24759379,24759380-24759488,24759604-247596... 27 6.3
06_03_0766 - 24425486-24426245,24430766-24430855,24430951-244310... 27 6.3
03_02_0170 + 6119667-6119912,6120032-6120169,6120311-6120421,612... 27 8.3
02_02_0607 - 12088810-12089105,12089200-12090208 27 8.3
>10_08_0319 -
16712572-16712654,16712756-16712797,16713955-16714239,
16714346-16714358
Length = 140
Score = 163 bits (395), Expect = 9e-41
Identities = 72/89 (80%), Positives = 83/89 (93%)
Frame = +1
Query: 160 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 339
K IKGRLNRLP+A GDM++ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGV++YFEDNA
Sbjct: 43 KGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNA 102
Query: 340 GVIVNNXGEMKGSAITGPVAKECADLWPR 426
GVIVN GEMKGSAITGP+ KECADLWPR
Sbjct: 103 GVIVNPKGEMKGSAITGPIGKECADLWPR 131
Score = 55.2 bits (127), Expect = 3e-08
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +3
Query: 30 MSKRGRGGSAGAKFRISLGSPSWEQ*STAPTTQGAKNLYVIAVQG 164
MSKRGRGGSAG KFR+SLG P + A T GAKNLY+I+V+G
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNT-GAKNLYIISVKG 44
>03_01_0276 +
2124538-2124550,2124678-2124962,2126813-2126854,
2126943-2127025
Length = 140
Score = 163 bits (395), Expect = 9e-41
Identities = 72/89 (80%), Positives = 83/89 (93%)
Frame = +1
Query: 160 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 339
K IKGRLNRLP+A GDM++ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGV++YFEDNA
Sbjct: 43 KGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNA 102
Query: 340 GVIVNNXGEMKGSAITGPVAKECADLWPR 426
GVIVN GEMKGSAITGP+ KECADLWPR
Sbjct: 103 GVIVNPKGEMKGSAITGPIGKECADLWPR 131
Score = 55.2 bits (127), Expect = 3e-08
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +3
Query: 30 MSKRGRGGSAGAKFRISLGSPSWEQ*STAPTTQGAKNLYVIAVQG 164
MSKRGRGGSAG KFR+SLG P + A T GAKNLY+I+V+G
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNT-GAKNLYIISVKG 44
>02_05_1201 +
34929577-34929589,34930252-34930587,34931378-34931419,
34931630-34931712
Length = 157
Score = 163 bits (395), Expect = 9e-41
Identities = 72/89 (80%), Positives = 83/89 (93%)
Frame = +1
Query: 160 KAIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNA 339
K IKGRLNRLP+A GDM++ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGV++YFEDNA
Sbjct: 60 KGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNA 119
Query: 340 GVIVNNXGEMKGSAITGPVAKECADLWPR 426
GVIVN GEMKGSAITGP+ KECADLWPR
Sbjct: 120 GVIVNPKGEMKGSAITGPIGKECADLWPR 148
Score = 47.6 bits (108), Expect = 5e-06
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = +3
Query: 42 GRGGSAGAKFRISLGSPSWEQ*STAPTTQGAKNLYVIAVQG 164
GRGGSAG KFR+SLG P + A T GAKNLY+I+V+G
Sbjct: 22 GRGGSAGNKFRMSLGLPVAATVNCADNT-GAKNLYIISVKG 61
>12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845
Length = 170
Score = 54.4 bits (125), Expect = 5e-08
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Frame = +1
Query: 205 GDMIVATVKKGKPELRKK---VMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNXGEMKG 375
GD I+ +VK+ +P + K V+ VV+R R DG I F+DNA V+VNN GE+ G
Sbjct: 84 GDTIIGSVKEAQPRGKVKKGDVVYGVVVRAAMKRGRNDGSEIQFDDNAIVLVNNKGELIG 143
Query: 376 SAITGPVAKE 405
+ + GPV E
Sbjct: 144 TRVFGPVPHE 153
>03_05_0291 - 22837412-22838128
Length = 238
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -1
Query: 440 AFEAIRGHRSAHSLATGPVMAEPFI--SPLLLTMTPALSS 327
+++A+ GH+++H T P MA + P T +PA SS
Sbjct: 100 SYQALGGHKTSHRPRTPPTMAAVVVVDEPAATTASPAASS 139
>01_01_0098 + 744582-745380,746107-746130,746500-747569
Length = 630
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 220 PQSCPRNRPPAVCSGDL**PWTAITYRFFAPCVVGAVDY 104
P SC + +CSG T + + F PC V A+DY
Sbjct: 60 PSSCGSSHAKLICSGQD----TILHHPFLGPCKVTAIDY 94
>07_03_0263 -
15951011-15951818,15952009-15952526,15952949-15953197,
15953270-15953857
Length = 720
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 9 LNFXYNKMSKRGRGGSAGAKF--RISLGSPSWEQ*STAPTTQGAKN 140
LNF + + GRGG G F +S G W+ S+A T G ++
Sbjct: 93 LNFGNSSSAGAGRGGGNGGAFPGGLSSGRGVWQHSSSAATALGRRS 138
>05_05_0020 -
21560896-21561352,21563399-21563480,21564143-21564263,
21564424-21565074,21565206-21565338,21565677-21565728,
21566115-21566244,21567241-21567300,21567444-21567536,
21567795-21567919,21568263-21568353,21568828-21569127,
21569415-21570038
Length = 972
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -3
Query: 198 GRRQSVQATFDSLGLRSHTDSLRPVLSAQLITAPSWESP 82
GRR+++QA LRS+ D+L + + +L+TA S +P
Sbjct: 246 GRRRALQAQEGIASLRSNVDTLIVIPNDKLLTAVSPNTP 284
>03_06_0296 +
32901696-32901892,32901989-32902232,32903992-32904112,
32904219-32904406
Length = 249
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -3
Query: 345 DTRIVLKVYKYSITPSERFPLPDDHCRHYLFPEFRFTLFDCGHNHV 208
+ I+++ Y+ T +R P P D + +F F L+DC +N V
Sbjct: 101 EINIIIEAYR---TLRDRGPYPADQVVRDINGKFAFVLYDCSNNSV 143
>02_02_0500 - 10993675-10994067,10994434-10995738
Length = 565
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -1
Query: 389 PVMAEPFISPLLLTMTPALSSKYINTPSRLLNGFRCLMTT---AGITFFR-SSGLPFLTV 222
P EP I+ + ++PA+ +T S + NG+ +M+T G+ F + SSG + V
Sbjct: 225 PAPVEPIIANGKVKLSPAVMEMIYSTISGIENGYLPVMSTEGSGGVYFMKDSSGESNVAV 284
Query: 221 ATIMSPEPAA 192
+ EP A
Sbjct: 285 FKPIDEEPMA 294
>07_03_1014 +
23304245-23304465,23304560-23304597,23304691-23304994,
23305104-23305314,23305529-23305546
Length = 263
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -3
Query: 171 FDSLGLRSHTDSLRPVLSAQLITAPSWESPGRYGISLP 58
FD LGL S +SLR + A+L+ W G GI +P
Sbjct: 81 FDPLGLGSDPESLRWNVQAELVHC-RWAMLGAAGIFIP 117
>06_03_0025 -
15577231-15577420,15577682-15577813,15578025-15578173,
15579012-15579071,15593208-15593297,15593604-15593871,
15594517-15594608,15595355-15595441,15597333-15597440,
15597709-15597822,15598253-15598420,15599442-15599579,
15599699-15599908,15600986-15601237,15601965-15602111,
15603327-15603443
Length = 773
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -3
Query: 300 SERFPLPDDHCRHYLFPEFRFTLFDCGHNHVPGTGRRQS 184
S R PLP+D C Y+ ++R + H+ G R S
Sbjct: 25 SSRVPLPEDTCDSYVEQKYRCYIRTLKGCHISGRNRLDS 63
>05_04_0098 +
17982196-17982355,17982761-17982978,17983232-17983418,
17983957-17984057,17984708-17984885,17984956-17985233
Length = 373
Score = 27.9 bits (59), Expect = 4.7
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +1
Query: 91 PAGSSNQLRRQHRAQRICM*SQSKAIKGRLNRLPAAGSGD--MIVATVKK-GKPELRKKV 261
P S R + R C S+ + GR+ LPA G GD A+ K+ G L+K++
Sbjct: 3 PTAPSPASVRAAASPRCCSRSRPWSSAGRVAALPADGRGDGASTAASYKELGLYSLKKRI 62
Query: 262 MPAVV 276
AVV
Sbjct: 63 EDAVV 67
>11_06_0538 +
24759030-24759379,24759380-24759488,24759604-24759692,
24760179-24760287,24760370-24760471,24760564-24760628,
24760830-24760936,24761023-24761087,24761163-24761217,
24761305-24761465
Length = 403
Score = 27.5 bits (58), Expect = 6.3
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = -1
Query: 356 LLTMTPALSSKY-INTPSRLLNGFRCLMTT--AGITFFRSSGLPFLTVATIMSPEPAAGS 186
LLT P + + SRL R L AG+ FF S+ + + I+ P P++
Sbjct: 37 LLTQRPCVEGTMTMGEQSRLPESLRLLDAAFDAGVNFFDSAEMYYYAPLLILPPPPSSFP 96
Query: 185 LFR 177
LF+
Sbjct: 97 LFQ 99
>06_03_0766 -
24425486-24426245,24430766-24430855,24430951-24431070,
24431568-24431746,24432046-24432231,24432454-24432547,
24432679-24432743,24433652-24433987
Length = 609
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = -3
Query: 204 GTGRRQSVQATFDSLGLRSHTDSLRPVLSAQLITAPSWESPGRYGISLPRNHHVLS*TFC 25
G+G R+ V A + GLR+ ++ LR ++ + P + + PR+ +V F
Sbjct: 45 GSGGRELVAALMGNPGLRAASERLRAEPERRISSGPEEDDADAAAAAAPRHVYVFQREFA 104
Query: 24 CI 19
+
Sbjct: 105 TV 106
>03_02_0170 +
6119667-6119912,6120032-6120169,6120311-6120421,
6120621-6120828,6120938-6121019,6121239-6121347,
6122175-6122291,6122378-6122602
Length = 411
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3
Query: 138 SLRPVLSAQLITAPSWESPGRYGISLPRNHHVL 40
S R ++S LITAP W SP GI + + VL
Sbjct: 195 SWRVLVSRLLITAPGW-SPNTDGIHVSNSREVL 226
>02_02_0607 - 12088810-12089105,12089200-12090208
Length = 434
Score = 27.1 bits (57), Expect = 8.3
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = -1
Query: 425 RGHRSAHSLATGPVMAEPFISPLLLTMTPALSSKYIN---TPSRLL-NGFRCLMTTAGIT 258
RG +A + V A+ F + + L + P +S + PS+L NG+R L A +
Sbjct: 150 RGGGAAAAAVPICVYAQAFAAGMRLPLHPFVSDALAHFGIAPSQLAPNGWRVLAGFAVLC 209
Query: 257 FFRSSGLPFLTV 222
FR G P L V
Sbjct: 210 HFRGVGAPSLPV 221
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,257,706
Number of Sequences: 37544
Number of extensions: 324143
Number of successful extensions: 989
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1035514020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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