Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_I01
         (331 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   0.63 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   4.4  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       20   7.7  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    20   7.7  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    20   7.7  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 0.63
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 316 GANSWVQSCGPNFTKSESSXR 254
           G NS++ +C P FT S    R
Sbjct: 41  GINSYICTCKPGFTGSNCQNR 61


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 9   FSLPW*NSDVKMGKGNNMIPNG 74
           F+  W  SDV + +G +  P G
Sbjct: 447 FNTFWQQSDVDLSRGMDFQPRG 468


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -2

Query: 297 NPAALISRRVNPLXGAYFSMVPNSWASH 214
           NP+  + R +  +  AY      SW +H
Sbjct: 295 NPSERVMRELGRIFRAYCRENHASWVNH 322


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = +1

Query: 85  RHWQRFVKTW 114
           + W +FVK W
Sbjct: 107 KRWPKFVKDW 116


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = +1

Query: 85  RHWQRFVKTW 114
           + W +FVK W
Sbjct: 107 KRWPKFVKDW 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,763
Number of Sequences: 336
Number of extensions: 1304
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6367260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)