Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_I01
         (331 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   1.7  
AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    23   2.3  
L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase pro...    23   3.0  
AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase p...    23   3.0  
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    22   6.9  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    21   9.1  

>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 45  GKGNNMIPNGHFHKALA 95
           G G  + PN +FHK+LA
Sbjct: 497 GAGGLLDPNSNFHKSLA 513


>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 260 RGFTLREIRAAGLNPAICPET 322
           +G  L    AA +N ++CP+T
Sbjct: 123 KGLLLAAAAAAAVNQSVCPQT 143


>L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 9   FSLPW*NSDVKMGKGNNMIPNGH 77
           F   W  SDV + +G + +P G+
Sbjct: 448 FQTFWQQSDVDLSRGMDFVPRGN 470


>AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 9   FSLPW*NSDVKMGKGNNMIPNGH 77
           F   W  SDV + +G + +P G+
Sbjct: 448 FQTFWQQSDVDLSRGMDFVPRGN 470


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -2

Query: 171 LSFLYXILLXAVSSSWLVKPSFNKSLPMPCGNV 73
           +SF+  I      SSW +K   N S  M C ++
Sbjct: 75  VSFIPSIAFPTFRSSWYIKQIGNMSPLMFCSSL 107


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -1

Query: 295 SCGPNFTKSESSXRRVL*YGTEQLGIA 215
           S GP  T ++SS   VL + T   GIA
Sbjct: 225 SAGPCRTNTKSSSDPVLNHDTTNTGIA 251


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 332,177
Number of Sequences: 2352
Number of extensions: 5451
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22910151
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)