Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_I01
(331 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein. 69 3e-12
BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13 p... 69 3e-12
BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein. 69 3e-12
BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13 p... 69 3e-12
BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13 p... 69 3e-12
BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein. 69 3e-12
BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13 p... 69 3e-12
BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13 p... 69 3e-12
BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13 p... 69 3e-12
BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13 p... 69 3e-12
BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13 p... 69 3e-12
BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13 p... 69 3e-12
BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein. 69 3e-12
AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13 p... 69 3e-12
BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13 p... 66 2e-11
>X64707-1|CAA45963.1| 211|Homo sapiens BBC1 protein.
Length = 211
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = +1
Query: 85 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 258
+ WQR V TWFNQPAR+ R ++ +RPIVRCPTVRYHTKVRAG
Sbjct: 16 KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
>BC106058-1|AAI06059.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = +1
Query: 85 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 258
+ WQR V TWFNQPAR+ R ++ +RPIVRCPTVRYHTKVRAG
Sbjct: 16 KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
>BC093063-1|AAH93063.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = +1
Query: 85 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 258
+ WQR V TWFNQPAR+ R ++ +RPIVRCPTVRYHTKVRAG
Sbjct: 16 KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
>BC063378-1|AAH63378.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = +1
Query: 85 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 258
+ WQR V TWFNQPAR+ R ++ +RPIVRCPTVRYHTKVRAG
Sbjct: 16 KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
>BC027463-1|AAH27463.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = +1
Query: 85 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 258
+ WQR V TWFNQPAR+ R ++ +RPIVRCPTVRYHTKVRAG
Sbjct: 16 KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
>BC020804-1|AAH20804.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = +1
Query: 85 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 258
+ WQR V TWFNQPAR+ R ++ +RPIVRCPTVRYHTKVRAG
Sbjct: 16 KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
>BC014167-1|AAH14167.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = +1
Query: 85 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 258
+ WQR V TWFNQPAR+ R ++ +RPIVRCPTVRYHTKVRAG
Sbjct: 16 KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
>BC013078-1|AAH13078.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = +1
Query: 85 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 258
+ WQR V TWFNQPAR+ R ++ +RPIVRCPTVRYHTKVRAG
Sbjct: 16 KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
>BC010994-1|AAH10994.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = +1
Query: 85 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 258
+ WQR V TWFNQPAR+ R ++ +RPIVRCPTVRYHTKVRAG
Sbjct: 16 KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
>BC007805-1|AAH07805.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = +1
Query: 85 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 258
+ WQR V TWFNQPAR+ R ++ +RPIVRCPTVRYHTKVRAG
Sbjct: 16 KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
>BC007563-1|AAH07563.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = +1
Query: 85 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 258
+ WQR V TWFNQPAR+ R ++ +RPIVRCPTVRYHTKVRAG
Sbjct: 16 KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
>BC007345-1|AAH07345.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = +1
Query: 85 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 258
+ WQR V TWFNQPAR+ R ++ +RPIVRCPTVRYHTKVRAG
Sbjct: 16 KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
>BC004954-1|AAH04954.1| 211|Homo sapiens RPL13 protein protein.
Length = 211
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = +1
Query: 85 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 258
+ WQR V TWFNQPAR+ R ++ +RPIVRCPTVRYHTKVRAG
Sbjct: 16 KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
>AB062392-1|BAB93479.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = +1
Query: 85 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 258
+ WQR V TWFNQPAR+ R ++ +RPIVRCPTVRYHTKVRAG
Sbjct: 16 KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAG 73
>BC066320-1|AAH66320.1| 211|Homo sapiens ribosomal protein L13
protein.
Length = 211
Score = 66.1 bits (154), Expect = 2e-11
Identities = 30/58 (51%), Positives = 35/58 (60%)
Frame = +1
Query: 85 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAG 258
+ WQR V TWFNQPAR+ R ++ +RPIVRC TVRYHTKVRAG
Sbjct: 16 KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCTTVRYHTKVRAG 73
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,308,199
Number of Sequences: 237096
Number of extensions: 806163
Number of successful extensions: 952
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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