Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_H23
         (404 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81128-9|CAC42344.1|  239|Caenorhabditis elegans Hypothetical pr...    27   6.8  
Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical pr...    27   6.8  

>Z81128-9|CAC42344.1|  239|Caenorhabditis elegans Hypothetical
           protein T23D8.9b protein.
          Length = 239

 Score = 26.6 bits (56), Expect = 6.8
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -1

Query: 212 SMQPENMQSTQSTPGVRCTQQRPEQYMQQ 126
           SMQP   Q  Q TP    TQQ+ +   QQ
Sbjct: 57  SMQPPPSQQQQMTPQALSTQQQQQVQQQQ 85


>Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical
           protein T23D8.9a protein.
          Length = 811

 Score = 26.6 bits (56), Expect = 6.8
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -1

Query: 212 SMQPENMQSTQSTPGVRCTQQRPEQYMQQ 126
           SMQP   Q  Q TP    TQQ+ +   QQ
Sbjct: 57  SMQPPPSQQQQMTPQALSTQQQQQVQQQQ 85


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,490,084
Number of Sequences: 27780
Number of extensions: 70077
Number of successful extensions: 246
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)