Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_H22
(373 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42677 Cluster: 40S ribosomal protein S27; n=74; Bilate... 121 4e-27
UniRef50_Q71UM5 Cluster: 40S ribosomal protein S27-like protein;... 121 4e-27
UniRef50_Q7RVN2 Cluster: 40S ribosomal protein S27; n=17; Fungi/... 110 9e-24
UniRef50_UPI00015B4FAB Cluster: PREDICTED: similar to myotubular... 103 8e-22
UniRef50_Q9AW40 Cluster: 40S ribosomal protein S27; n=1; Guillar... 73 2e-12
UniRef50_UPI00005A14C9 Cluster: PREDICTED: similar to ribosomal ... 63 1e-09
UniRef50_Q7R0I3 Cluster: Ribosomal protein S27; n=1; Giardia lam... 61 5e-09
UniRef50_Q6QI38 Cluster: LRRGT00170; n=2; Rattus norvegicus|Rep:... 60 1e-08
UniRef50_A2DGQ3 Cluster: Ribosomal protein S27, putative; n=4; T... 59 2e-08
UniRef50_Q8SS34 Cluster: 40S RIBOSOMAL PROTEIN S27; n=1; Encepha... 54 6e-07
UniRef50_Q6QI46 Cluster: LRRGT00162; n=1; Rattus norvegicus|Rep:... 52 3e-06
UniRef50_Q8ZTY4 Cluster: 30S ribosomal protein S27e; n=10; Archa... 52 4e-06
UniRef50_Q3LW62 Cluster: Ribosomal protein S27; n=1; Bigelowiell... 49 2e-05
UniRef50_Q9YF01 Cluster: 30S ribosomal protein S27e; n=4; Thermo... 48 4e-05
UniRef50_A0RY94 Cluster: Ribosomal protein S27E; n=1; Cenarchaeu... 48 5e-05
UniRef50_Q9HRT7 Cluster: 30S ribosomal protein S27e; n=7; Euryar... 47 9e-05
UniRef50_A7DPS1 Cluster: Ribosomal protein S27E; n=1; Candidatus... 44 7e-04
UniRef50_Q1PS48 Cluster: Cxpwmw06; n=1; Periplaneta americana|Re... 44 9e-04
UniRef50_Q8U474 Cluster: 30S ribosomal protein S27e; n=9; Euryar... 44 9e-04
UniRef50_Q8TY87 Cluster: 30S ribosomal protein S27e; n=13; Archa... 43 0.002
UniRef50_Q22CK0 Cluster: Putative uncharacterized protein; n=1; ... 42 0.004
UniRef50_Q18KR1 Cluster: Ribosomal protein S27.eR; n=3; Halobact... 42 0.005
UniRef50_Q9HIX2 Cluster: 30S ribosomal protein S27e; n=4; Thermo... 39 0.025
UniRef50_Q5T4L4 Cluster: Ribosomal protein S27; n=30; Fungi/Meta... 34 0.95
UniRef50_Q8TGN0 Cluster: Uncharacterized protein YKL156C-A; n=1;... 33 1.3
UniRef50_A7PBG8 Cluster: Chromosome chr16 scaffold_10, whole gen... 32 2.9
UniRef50_Q7QFC6 Cluster: ENSANGP00000020801; n=2; Culicidae|Rep:... 31 6.7
UniRef50_UPI000069E555 Cluster: Lymphocyte antigen 75 precursor ... 31 8.8
>UniRef50_P42677 Cluster: 40S ribosomal protein S27; n=74;
Bilateria|Rep: 40S ribosomal protein S27 - Homo sapiens
(Human)
Length = 84
Score = 121 bits (292), Expect = 4e-27
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLTEGCSFXRKQH 216
V PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+A LTEGCSF RKQH
Sbjct: 25 VQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
>UniRef50_Q71UM5 Cluster: 40S ribosomal protein S27-like protein;
n=100; Eukaryota|Rep: 40S ribosomal protein S27-like
protein - Homo sapiens (Human)
Length = 84
Score = 121 bits (292), Expect = 4e-27
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLTEGCSFXRKQH 216
V PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+A LTEGCSF RKQH
Sbjct: 25 VQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
>UniRef50_Q7RVN2 Cluster: 40S ribosomal protein S27; n=17;
Fungi/Metazoa group|Rep: 40S ribosomal protein S27 -
Neurospora crassa
Length = 82
Score = 110 bits (264), Expect = 9e-24
Identities = 45/58 (77%), Positives = 51/58 (87%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLTEGCSFXRK 210
VP P S+FMDVKCPGC+ ITTVFSHAQ VV+C GC+T+LCQPTGG+A LTEGCSF RK
Sbjct: 25 VPAPRSFFMDVKCPGCFTITTVFSHAQTVVICQGCTTVLCQPTGGKARLTEGCSFRRK 82
>UniRef50_UPI00015B4FAB Cluster: PREDICTED: similar to myotubularin;
n=2; Apocrita|Rep: PREDICTED: similar to myotubularin -
Nasonia vitripennis
Length = 2064
Score = 103 bits (248), Expect = 8e-22
Identities = 44/58 (75%), Positives = 47/58 (81%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLTEGCSFXRK 210
V PNSYFMDVKCPGCY I T+FSHAQR V C GC TILC PTGG+A LTEGCSF +K
Sbjct: 2004 VQKPNSYFMDVKCPGCYAIKTIFSHAQRPVECDGCRTILCTPTGGKARLTEGCSFRKK 2061
>UniRef50_Q9AW40 Cluster: 40S ribosomal protein S27; n=1; Guillardia
theta|Rep: 40S ribosomal protein S27 - Guillardia theta
(Cryptomonas phi)
Length = 81
Score = 72.5 bits (170), Expect = 2e-12
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLTEGCSFXR 207
+P+PNSYF+++ C C +FSH+Q +VC C+ LC PTGG+A L +GC F R
Sbjct: 24 IPNPNSYFINIICKNCKNKNIIFSHSQTKIVCKNCALNLCYPTGGKARLIKGCKFSR 80
>UniRef50_UPI00005A14C9 Cluster: PREDICTED: similar to ribosomal
protein S27; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein S27 - Canis familiaris
Length = 115
Score = 63.3 bits (147), Expect = 1e-09
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILC 156
V PNSYFMD+KCPGCYKITTVFSHAQ VV+ A T+ C
Sbjct: 24 VQSPNSYFMDMKCPGCYKITTVFSHAQTVVLKA--QTLRC 61
>UniRef50_Q7R0I3 Cluster: Ribosomal protein S27; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein S27 - Giardia
lamblia ATCC 50803
Length = 81
Score = 61.3 bits (142), Expect = 5e-09
Identities = 24/50 (48%), Positives = 32/50 (64%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLT 186
V PNSYF+++KC GC I V+SHA V C GC++ + PTGG+ T
Sbjct: 23 VQGPNSYFLEIKCAGCQDIVVVYSHANTPVFCPGCTSQISIPTGGKCAFT 72
>UniRef50_Q6QI38 Cluster: LRRGT00170; n=2; Rattus norvegicus|Rep:
LRRGT00170 - Rattus norvegicus (Rat)
Length = 496
Score = 60.5 bits (140), Expect = 1e-08
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPT 165
V P+SYFMDVK GCYK+ +FS VV+ GCST+ CQPT
Sbjct: 212 VQSPSSYFMDVKYLGCYKVPNIFSQEHTVVLYDGCSTVFCQPT 254
>UniRef50_A2DGQ3 Cluster: Ribosomal protein S27, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S27,
putative - Trichomonas vaginalis G3
Length = 86
Score = 59.3 bits (137), Expect = 2e-08
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLTE 189
VP+P S F+ ++CP C +TT FSH+ V C C T L PTGGR L +
Sbjct: 26 VPNPRSEFLSLRCPSCTGLTTAFSHSNVPVFCKNCQTPLATPTGGRILLAD 76
>UniRef50_Q8SS34 Cluster: 40S RIBOSOMAL PROTEIN S27; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S27
- Encephalitozoon cuniculi
Length = 85
Score = 54.4 bits (125), Expect = 6e-07
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +1
Query: 49 NSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLTEGCSFXR 207
N +FM V+C GC T +SH+Q + C GC I+ +GGRA ++ C F +
Sbjct: 27 NGFFMYVRCGGCRHTTCCYSHSQTNISCPGCGDIILTSSGGRAVVSPNCEFKK 79
>UniRef50_Q6QI46 Cluster: LRRGT00162; n=1; Rattus norvegicus|Rep:
LRRGT00162 - Rattus norvegicus (Rat)
Length = 291
Score = 52.4 bits (120), Expect = 3e-06
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVV 129
V PNSYFMDV+CPG Y+ITTVFS AQ VV+
Sbjct: 191 VQSPNSYFMDVQCPGRYEITTVFSRAQTVVL 221
>UniRef50_Q8ZTY4 Cluster: 30S ribosomal protein S27e; n=10;
Archaea|Rep: 30S ribosomal protein S27e - Pyrobaculum
aerophilum
Length = 67
Score = 51.6 bits (118), Expect = 4e-06
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXL 183
+P P S F+ +CP C FSHA VV C C +L PTGG+A L
Sbjct: 10 IPQPKSKFIKTRCPDCGNEQITFSHAAMVVRCLVCGRVLAIPTGGKAKL 58
>UniRef50_Q3LW62 Cluster: Ribosomal protein S27; n=1; Bigelowiella
natans|Rep: Ribosomal protein S27 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 93
Score = 49.2 bits (112), Expect = 2e-05
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGR 174
+ PNS+++ KC C KI +FSH+ C CST+L +P+GG+
Sbjct: 28 IQSPNSHYIATKCLKCKKINIIFSHSVFWKTCVDCSTLLTRPSGGK 73
>UniRef50_Q9YF01 Cluster: 30S ribosomal protein S27e; n=4;
Thermoprotei|Rep: 30S ribosomal protein S27e - Aeropyrum
pernix
Length = 73
Score = 48.4 bits (110), Expect = 4e-05
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXL 183
+P P S F+ V CP C VFSH+ C C +L +PTGG+A +
Sbjct: 16 IPRPRSRFLLVTCPKCGNRQVVFSHSTFRARCLNCGEVLVEPTGGKARI 64
>UniRef50_A0RY94 Cluster: Ribosomal protein S27E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S27E - Cenarchaeum
symbiosum
Length = 224
Score = 48.0 bits (109), Expect = 5e-05
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXL 183
VP P S F+ ++C C T V+S A+ V C C +L +P GG+A L
Sbjct: 8 VPEPTSRFVKIECESCGSPTIVYSMAKSAVNCRFCGNLLAEPAGGKAVL 56
>UniRef50_Q9HRT7 Cluster: 30S ribosomal protein S27e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S27e -
Halobacterium salinarium (Halobacterium halobium)
Length = 57
Score = 47.2 bits (107), Expect = 9e-05
Identities = 21/42 (50%), Positives = 24/42 (57%)
Frame = +1
Query: 58 FMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXL 183
F +V+CP C TVF A V CA C T L +PTGG A L
Sbjct: 5 FYNVECPDCENEQTVFGKASTEVACAVCGTTLARPTGGEADL 46
>UniRef50_A7DPS1 Cluster: Ribosomal protein S27E; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S27E - Candidatus Nitrosopumilus maritimus SCM1
Length = 65
Score = 44.4 bits (100), Expect = 7e-04
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXL 183
+P P+S F V C C ++ V+SHA V C C + + TG +A +
Sbjct: 8 IPKPSSKFQKVNCNECGELQIVYSHASTQVACNSCGNAIAEATGSKAKI 56
>UniRef50_Q1PS48 Cluster: Cxpwmw06; n=1; Periplaneta americana|Rep:
Cxpwmw06 - Periplaneta americana (American cockroach)
Length = 54
Score = 44.0 bits (99), Expect = 9e-04
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = -2
Query: 216 MLFSXKRXXXXXXXXXXXXXTKDR*ASSADHHSLCVTKNCCNLVTARALNIHEI 55
MLFS KR T+DR S +++LC+T++ C+LV RAL++H++
Sbjct: 1 MLFSSKRATFSESRPATCWLTQDRRTSCTHYYTLCMTEHRCDLVATRALHVHKV 54
>UniRef50_Q8U474 Cluster: 30S ribosomal protein S27e; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S27e -
Pyrococcus furiosus
Length = 63
Score = 44.0 bits (99), Expect = 9e-04
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGR 174
+P P S F+ VKC C VFSH V C C L +PTGG+
Sbjct: 6 IPMPRSRFLRVKCIDCGNEQIVFSHPATKVRCLICGATLVEPTGGK 51
>UniRef50_Q8TY87 Cluster: 30S ribosomal protein S27e; n=13;
Archaea|Rep: 30S ribosomal protein S27e - Methanopyrus
kandleri
Length = 73
Score = 43.2 bits (97), Expect = 0.002
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXL 183
VP P S F+ V+C C +F +A V C C L +PTGG+A +
Sbjct: 16 VPQPRSRFLRVECVDCGNEQIIFGNASTEVKCHICGRTLAKPTGGKAKI 64
>UniRef50_Q22CK0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 217
Score = 41.9 bits (94), Expect = 0.004
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +1
Query: 46 PNSYFMDVKCPGCYKITTVFSHAQRVVV 129
PNSYFMDVKC C I +FS+AQ ++
Sbjct: 26 PNSYFMDVKCAQCQNIQMIFSNAQSTII 53
Score = 35.9 bits (79), Expect = 0.23
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 139 CSTILCQPTGGRAXLTEGCSFXRK 210
CS ILC+PTGG+ + GC+F K
Sbjct: 193 CSAILCKPTGGKVQIQAGCAFKIK 216
>UniRef50_Q18KR1 Cluster: Ribosomal protein S27.eR; n=3;
Halobacteriaceae|Rep: Ribosomal protein S27.eR -
Haloquadratum walsbyi (strain DSM 16790)
Length = 75
Score = 41.5 bits (93), Expect = 0.005
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +1
Query: 58 FMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRA 177
F ++CP C +F A VV CA C T L PTGG A
Sbjct: 5 FYQLQCPDCNNEQVIFGKASTVVNCAVCGTTLATPTGGDA 44
>UniRef50_Q9HIX2 Cluster: 30S ribosomal protein S27e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S27e -
Thermoplasma acidophilum
Length = 65
Score = 39.1 bits (87), Expect = 0.025
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 49 NSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGG 171
N +F+ +KC C + VF+ V C C + +PTGG
Sbjct: 13 NGHFVKIKCRDCGNVQVVFARPSSTVTCNICGATIAKPTGG 53
>UniRef50_Q5T4L4 Cluster: Ribosomal protein S27; n=30;
Fungi/Metazoa group|Rep: Ribosomal protein S27 - Homo
sapiens (Human)
Length = 66
Score = 33.9 bits (74), Expect = 0.95
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPG 81
V PNSYFMDVKCPG
Sbjct: 25 VQSPNSYFMDVKCPG 39
>UniRef50_Q8TGN0 Cluster: Uncharacterized protein YKL156C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YKL156C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 38
Score = 33.5 bits (73), Expect = 1.3
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -3
Query: 83 QPGHLTSMK*ELGCGTSRLSLCFL 12
QPGHLTS K +LG T+ +LCFL
Sbjct: 4 QPGHLTSRKYDLGPWTNVFNLCFL 27
>UniRef50_A7PBG8 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 302
Score = 32.3 bits (70), Expect = 2.9
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 49 NSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTG 168
N++ + CP C + + ++V CAGC I+ QP G
Sbjct: 239 NNFVIKGNCPACRR--QFIGYKNQIVRCAGCGNIVWQPKG 276
>UniRef50_Q7QFC6 Cluster: ENSANGP00000020801; n=2; Culicidae|Rep:
ENSANGP00000020801 - Anopheles gambiae str. PEST
Length = 611
Score = 31.1 bits (67), Expect = 6.7
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 70 KCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRA 177
+CP C K TV Q C C TI CQP G++
Sbjct: 545 QCPNCKKEFTVTRRKQH---CRHCGTIYCQPCLGKS 577
>UniRef50_UPI000069E555 Cluster: Lymphocyte antigen 75 precursor
(DEC-205) (gp200-MR6) (CD205 antigen).; n=6; Xenopus
tropicalis|Rep: Lymphocyte antigen 75 precursor
(DEC-205) (gp200-MR6) (CD205 antigen). - Xenopus
tropicalis
Length = 1405
Score = 30.7 bits (66), Expect = 8.8
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +2
Query: 41 HILTLISWMLSALAVTRLQQFLVTHREWWSALDAQRSF 154
H+L++ S A +R+++F+ T+++WW L + F
Sbjct: 812 HLLSIHSAAEQAFIESRIRKFVKTNKKWWIGLSEEEHF 849
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 284,338,101
Number of Sequences: 1657284
Number of extensions: 4096143
Number of successful extensions: 9307
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 9144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9305
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 13594373344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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