Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_H22
(373 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U57847-1|AAB02266.1| 84|Homo sapiens ribosomal protein S27 pro... 121 6e-28
L19739-1|AAA59867.1| 84|Homo sapiens metallopanstimulin protein. 121 6e-28
BC070219-1|AAH70219.1| 84|Homo sapiens ribosomal protein S27 (... 121 6e-28
BC003667-1|AAH03667.1| 84|Homo sapiens ribosomal protein S27-l... 121 6e-28
BC002658-1|AAH02658.1| 84|Homo sapiens ribosomal protein S27 (... 121 6e-28
AL358472-19|CAI14033.1| 84|Homo sapiens ribosomal protein S27 ... 121 6e-28
AB061845-1|BAB79483.1| 84|Homo sapiens ribosomal protein S27 p... 121 6e-28
BC047648-1|AAH47648.1| 113|Homo sapiens RPS27L protein protein. 108 5e-24
AB007162-1|BAA25825.1| 69|Homo sapiens ribosomal protein S27 p... 100 1e-21
AL358472-18|CAI14032.1| 66|Homo sapiens ribosomal protein S27 ... 34 0.17
BC007355-1|AAH07355.1| 287|Homo sapiens solute carrier family 2... 29 6.3
AK075249-1|BAC11497.1| 287|Homo sapiens protein ( Homo sapiens ... 29 6.3
AJ131613-1|CAB59892.1| 287|Homo sapiens dicarboxylate carrier p... 29 6.3
AJ131612-1|CAB60007.1| 287|Homo sapiens dicarboxylate carrier p... 29 6.3
>U57847-1|AAB02266.1| 84|Homo sapiens ribosomal protein S27
protein.
Length = 84
Score = 121 bits (292), Expect = 6e-28
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLTEGCSFXRKQH 216
V PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+A LTEGCSF RKQH
Sbjct: 25 VQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
>L19739-1|AAA59867.1| 84|Homo sapiens metallopanstimulin protein.
Length = 84
Score = 121 bits (292), Expect = 6e-28
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLTEGCSFXRKQH 216
V PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+A LTEGCSF RKQH
Sbjct: 25 VQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
>BC070219-1|AAH70219.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 121 bits (292), Expect = 6e-28
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLTEGCSFXRKQH 216
V PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+A LTEGCSF RKQH
Sbjct: 25 VQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
>BC003667-1|AAH03667.1| 84|Homo sapiens ribosomal protein S27-like
protein.
Length = 84
Score = 121 bits (292), Expect = 6e-28
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLTEGCSFXRKQH 216
V PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+A LTEGCSF RKQH
Sbjct: 25 VQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
>BC002658-1|AAH02658.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 121 bits (292), Expect = 6e-28
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLTEGCSFXRKQH 216
V PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+A LTEGCSF RKQH
Sbjct: 25 VQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
>AL358472-19|CAI14033.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 121 bits (292), Expect = 6e-28
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLTEGCSFXRKQH 216
V PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+A LTEGCSF RKQH
Sbjct: 25 VQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
>AB061845-1|BAB79483.1| 84|Homo sapiens ribosomal protein S27
protein.
Length = 84
Score = 121 bits (292), Expect = 6e-28
Identities = 51/60 (85%), Positives = 54/60 (90%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLTEGCSFXRKQH 216
V PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+A LTEGCSF RKQH
Sbjct: 25 VQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQH 84
>BC047648-1|AAH47648.1| 113|Homo sapiens RPS27L protein protein.
Length = 113
Score = 108 bits (260), Expect = 5e-24
Identities = 46/55 (83%), Positives = 49/55 (89%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLTEGCSF 201
V PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+A LTEG SF
Sbjct: 41 VQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGISF 95
>AB007162-1|BAA25825.1| 69|Homo sapiens ribosomal protein S27
protein.
Length = 69
Score = 100 bits (240), Expect = 1e-21
Identities = 42/50 (84%), Positives = 45/50 (90%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLT 186
V PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+A LT
Sbjct: 20 VQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLT 69
>AL358472-18|CAI14032.1| 66|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 66
Score = 33.9 bits (74), Expect = 0.17
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 37 VPHPNSYFMDVKCPG 81
V PNSYFMDVKCPG
Sbjct: 25 VQSPNSYFMDVKCPG 39
>BC007355-1|AAH07355.1| 287|Homo sapiens solute carrier family 25
(mitochondrial carrier; dicarboxylate transporter), me
protein.
Length = 287
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 85 YKITTVFSHAQRVVVCAGCSTILCQP 162
Y +F+H + GC+T LCQP
Sbjct: 194 YLSDNIFTHFVASFIAGGCATFLCQP 219
>AK075249-1|BAC11497.1| 287|Homo sapiens protein ( Homo sapiens
cDNA FLJ90768 fis, clone THYRO1000795, highly similar to
Mitochondrial dicarboxylate carrier. ).
Length = 287
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 85 YKITTVFSHAQRVVVCAGCSTILCQP 162
Y +F+H + GC+T LCQP
Sbjct: 194 YLSDNIFTHFVASFIAGGCATFLCQP 219
>AJ131613-1|CAB59892.1| 287|Homo sapiens dicarboxylate carrier
protein protein.
Length = 287
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 85 YKITTVFSHAQRVVVCAGCSTILCQP 162
Y +F+H + GC+T LCQP
Sbjct: 194 YLSDNIFTHFVASFIAGGCATFLCQP 219
>AJ131612-1|CAB60007.1| 287|Homo sapiens dicarboxylate carrier
protein protein.
Length = 287
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 85 YKITTVFSHAQRVVVCAGCSTILCQP 162
Y +F+H + GC+T LCQP
Sbjct: 194 YLSDNIFTHFVASFIAGGCATFLCQP 219
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,437,770
Number of Sequences: 237096
Number of extensions: 681162
Number of successful extensions: 1262
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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