Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_H21
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71185-2|CAA94904.2|  522|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z78415-3|CAB01674.1|  530|Caenorhabditis elegans Hypothetical pr...    32   0.41 
Z31590-7|CAA83463.1|  361|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AF022972-10|AAC48233.2|  523|Caenorhabditis elegans Udp-glucuron...    29   2.2  
AF067619-1|AAC17568.2|  368|Caenorhabditis elegans Hypothetical ...    28   5.0  
Z83120-2|CAB05586.1|  883|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AF022972-7|AAM29671.1|  124|Caenorhabditis elegans Hypothetical ...    28   6.6  
AF022972-5|AAC48237.1|  523|Caenorhabditis elegans Udp-glucurono...    28   6.6  
AF024503-1|AAG24089.2|  527|Caenorhabditis elegans Hypothetical ...    27   8.7  
AF022972-4|AAC48236.2|  528|Caenorhabditis elegans Udp-glucurono...    27   8.7  

>Z71185-2|CAA94904.2|  522|Caenorhabditis elegans Hypothetical
           protein C35A5.2 protein.
          Length = 522

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 45/189 (23%), Positives = 78/189 (41%), Gaps = 11/189 (5%)
 Frame = +3

Query: 30  MRSVLGLCLIFLANQVQGYTVLVITALPFRSLNILGASVVSHLLNSGHEVTYITTSPLKE 209
           M++ L LC +FL   VQ +  LV   L   S +   A +   L ++GH VT++    L++
Sbjct: 1   MKNTLFLCTLFLVGFVQPFNYLVFCPLYAHSHHKFLAKIADTLTDAGHNVTFLAPIVLRK 60

Query: 210 KPNKNYRXIDVSANNEIFKGEXMIDIXCL-MDNKVXMNNIFDLQNITIANALMTFEN--- 377
             N  Y    + +  +I   +   ++  L   +        D   I    A+ TF     
Sbjct: 61  YENVKY----LESTKDIVYIQPSKELEALGFTSNYSKFWTEDATAIQFVPAVRTFVKMFV 116

Query: 378 ---EDVKK----LIQNTNESFDVVIAXYIDTEVYAAFSALYGCPLIWLSSLRTNWQTLRL 536
              ED+KK    L +  N +FD ++  ++    +     L    L+   S+  + Q  R 
Sbjct: 117 QLYEDLKKDLSVLDELKNRNFDAIVFEFLCPTAFPIAEYLGIKALLPSLSMTHHTQMSRW 176

Query: 537 IDEPTIPLI 563
           I EP+ P +
Sbjct: 177 IGEPSSPTV 185


>Z78415-3|CAB01674.1|  530|Caenorhabditis elegans Hypothetical
           protein C17G1.3a protein.
          Length = 530

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 29/116 (25%), Positives = 53/116 (45%)
 Frame = +3

Query: 30  MRSVLGLCLIFLANQVQGYTVLVITALPFRSLNILGASVVSHLLNSGHEVTYITTSPLKE 209
           M+ +  L L  L N    Y +LV + L   S      SVV  L+++GH+VT +   P+ +
Sbjct: 1   MQLLSALLLQILFNVSSPYKILVYSNLFGHSHIKFVGSVVDTLVDAGHDVTVVL--PVID 58

Query: 210 KPNKNYRXIDVSANNEIFKGEXMIDIXCLMDNKVXMNNIFDLQNITIANALMTFEN 377
              KN   I   A   I   +  + +      +  ++N++ ++   ++N LM + N
Sbjct: 59  STQKNRTSIKSGAKQIIIDADEEV-VEIFSQTEKFLSNMWTME---MSNPLMMWMN 110


>Z31590-7|CAA83463.1|  361|Caenorhabditis elegans Hypothetical
           protein R01H10.6 protein.
          Length = 361

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
 Frame = +3

Query: 24  VRMR-SVLGLCLIFLANQVQGYTVLVITALPFRSLNILGASVVS----HLLNSGHEVTYI 188
           VR+R S  G+ L+       G  VL     P   L  L  +V S    HLL     V+Y+
Sbjct: 219 VRVRESKFGMALVLETTTSSGEYVLGFRVDPAERLQNLLKTVQSLHKAHLLKPIFGVSYV 278

Query: 189 TTSPLKEKPNKNYRXIDVSANNE 257
                K +P K+   ID+  NNE
Sbjct: 279 KEIAEKVEPRKDDDEIDIIDNNE 301


>AF022972-10|AAC48233.2|  523|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein39, isoform a
           protein.
          Length = 523

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 17/63 (26%), Positives = 32/63 (50%)
 Frame = +3

Query: 39  VLGLCLIFLANQVQGYTVLVITALPFRSLNILGASVVSHLLNSGHEVTYITTSPLKEKPN 218
           +L +  +F  N V  +  LV   L   S +   A++   L ++GH VT+ T + +++  N
Sbjct: 3   LLFILFLFFGN-VSSFNFLVFCPLFAHSHSKFFATIADSLTDAGHNVTFFTPTIVEKYRN 61

Query: 219 KNY 227
            +Y
Sbjct: 62  VSY 64


>AF067619-1|AAC17568.2|  368|Caenorhabditis elegans Hypothetical
           protein K03E5.3 protein.
          Length = 368

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
 Frame = +3

Query: 282 DIXCLMDNKVXMNNIFDLQNITIANA--LMTFE--NEDVKKLIQNTNESFDVVIAXYIDT 449
           +I C+ D  +  +NI  L +I  AN+   M FE  + D+K L++    +  V+   Y+ +
Sbjct: 92  EISCIKD--LQHDNIVTLFDIIYANSKLYMVFEFIDRDLKNLLEMLEPTNSVLPPNYVKS 149

Query: 450 EVYAAFSALYGCPL 491
            ++   SAL  C L
Sbjct: 150 FMWQLLSALSYCHL 163


>Z83120-2|CAB05586.1|  883|Caenorhabditis elegans Hypothetical
           protein R06A4.4a protein.
          Length = 883

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 194 CCYVSYLMSGIKEMAHNTS 138
           CCY+ Y++S +KEM   TS
Sbjct: 45  CCYLVYILSDMKEMIDATS 63


>AF022972-7|AAM29671.1|  124|Caenorhabditis elegans Hypothetical
           protein F10D2.8 protein.
          Length = 124

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = +3

Query: 48  LCLIFLANQVQGYTVLVITALPFRSLNILGASVVSHLLNSGHEVTYITTSPLKEKPNKNY 227
           L ++ L      Y  LV   L   S     A++   L ++GH VT+ T + +++  N +Y
Sbjct: 5   LVILSLIYSTYSYNFLVFCPLFGHSHTKFFATIADALTDAGHNVTFFTPTIVEKYRNVSY 64


>AF022972-5|AAC48237.1|  523|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein38 protein.
          Length = 523

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +3

Query: 39  VLGLCLIF-LANQVQGYTVLVITALPFRSLNILGASVVSHLLNSGHEVTYITTSPLKEKP 215
           +L L L+F L   V  +  LV   L   S +   A++   L ++GH V + T   +++  
Sbjct: 1   MLLLALLFTLYANVSSFNFLVFCPLFAHSHSKFFATIADSLTDAGHNVAFFTPIIVEKYR 60

Query: 216 NKNY 227
           N NY
Sbjct: 61  NFNY 64


>AF024503-1|AAG24089.2|  527|Caenorhabditis elegans Hypothetical
           protein F31F4.7 protein.
          Length = 527

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/54 (24%), Positives = 26/54 (48%)
 Frame = +3

Query: 30  MRSVLGLCLIFLANQVQGYTVLVITALPFRSLNILGASVVSHLLNSGHEVTYIT 191
           M  ++ L  +FL + + G+  LV++     S +     +   L  +GH VT ++
Sbjct: 1   MNLLILLIFVFLISNISGFNYLVVSPAFGHSHSTFMGKLADALTEAGHNVTVLS 54


>AF022972-4|AAC48236.2|  528|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein37 protein.
          Length = 528

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +3

Query: 48  LCLIFLANQVQ-GYTVLVITALPFRSLNILGASVVSHLLNSGHEVTYITTSPLKEKPNKN 224
           L L+F    V   Y  L+ + L   S     A +   L  +GH VT+ T + +++    N
Sbjct: 4   LILLFACFNVNFSYNFLIFSPLFGHSHTTFFAKIADTLSEAGHNVTFFTPTIIRKFSKIN 63

Query: 225 Y 227
           Y
Sbjct: 64  Y 64


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,231,508
Number of Sequences: 27780
Number of extensions: 221281
Number of successful extensions: 620
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)