Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_H20
         (615 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX120002-11|CAI95569.2|  516|Homo sapiens zinc finger protein 57...    31   4.3  
AL929591-11|CAI41919.2|  516|Homo sapiens zinc finger protein 57...    31   4.3  
AL669813-1|CAI17624.2|  516|Homo sapiens zinc finger protein 57 ...    31   4.3  
AL645936-20|CAI18028.2|  516|Homo sapiens zinc finger protein 57...    31   4.3  
AL050328-8|CAB89275.2|  452|Homo sapiens chromosome 6 open readi...    31   4.3  

>BX120002-11|CAI95569.2|  516|Homo sapiens zinc finger protein 57
           homolog (mouse) protein.
          Length = 516

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
 Frame = +3

Query: 366 KSRQYGVFCCCPHHSLTMSKVTVIYFF----------YCFECLNS-KHXSNI*XKNNLNX 512
           K  +  VFCC PH SLT SK + +             YCF C  S    S +      + 
Sbjct: 357 KPSRLNVFCC-PHCSLTFSKKSYLSRHQKAHLTEPPNYCFHCSKSFSSFSRLVRHQQTHW 415

Query: 513 KMFSTLCAIC 542
           K  S LC IC
Sbjct: 416 KQKSYLCPIC 425


>AL929591-11|CAI41919.2|  516|Homo sapiens zinc finger protein 57
           homolog (mouse) protein.
          Length = 516

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
 Frame = +3

Query: 366 KSRQYGVFCCCPHHSLTMSKVTVIYFF----------YCFECLNS-KHXSNI*XKNNLNX 512
           K  +  VFCC PH SLT SK + +             YCF C  S    S +      + 
Sbjct: 357 KPSRLNVFCC-PHCSLTFSKKSYLSRHQKAHLTEPPNYCFHCSKSFSSFSRLVRHQQTHW 415

Query: 513 KMFSTLCAIC 542
           K  S LC IC
Sbjct: 416 KQKSYLCPIC 425


>AL669813-1|CAI17624.2|  516|Homo sapiens zinc finger protein 57
           homolog (mouse) protein.
          Length = 516

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
 Frame = +3

Query: 366 KSRQYGVFCCCPHHSLTMSKVTVIYFF----------YCFECLNS-KHXSNI*XKNNLNX 512
           K  +  VFCC PH SLT SK + +             YCF C  S    S +      + 
Sbjct: 357 KPSRLNVFCC-PHCSLTFSKKSYLSRHQKAHLTEPPNYCFHCSKSFSSFSRLVRHQQTHW 415

Query: 513 KMFSTLCAIC 542
           K  S LC IC
Sbjct: 416 KQKSYLCPIC 425


>AL645936-20|CAI18028.2|  516|Homo sapiens zinc finger protein 57
           homolog (mouse) protein.
          Length = 516

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
 Frame = +3

Query: 366 KSRQYGVFCCCPHHSLTMSKVTVIYFF----------YCFECLNS-KHXSNI*XKNNLNX 512
           K  +  VFCC PH SLT SK + +             YCF C  S    S +      + 
Sbjct: 357 KPSRLNVFCC-PHCSLTFSKKSYLSRHQKAHLTEPPNYCFHCSKSFSSFSRLVRHQQTHW 415

Query: 513 KMFSTLCAIC 542
           K  S LC IC
Sbjct: 416 KQKSYLCPIC 425


>AL050328-8|CAB89275.2|  452|Homo sapiens chromosome 6 open reading
           frame 40 protein.
          Length = 452

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
 Frame = +3

Query: 366 KSRQYGVFCCCPHHSLTMSKVTVIYFF----------YCFECLNS-KHXSNI*XKNNLNX 512
           K  +  VFCC PH SLT SK + +             YCF C  S    S +      + 
Sbjct: 293 KPSRLNVFCC-PHCSLTFSKKSYLSRHQKAHLTEPPNYCFHCSKSFSSFSRLVRHQQTHW 351

Query: 513 KMFSTLCAIC 542
           K  S LC IC
Sbjct: 352 KQKSYLCPIC 361


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,097,000
Number of Sequences: 237096
Number of extensions: 1296948
Number of successful extensions: 5584
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5584
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)