Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_H20
         (615 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical...    30   1.5  
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ...    30   1.5  
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U13070-21|AAC46647.1|  133|Caenorhabditis elegans Hypothetical p...    27   8.1  
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ...    27   8.1  

>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
           protein Y64G10A.7 protein.
          Length = 1651

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 396 CPHHSLTMSKVTVIYFFYCFECLN 467
           C HH L +SK+ V+  F+C + LN
Sbjct: 6   CTHHLLPVSKLMVLCKFFCVDILN 29


>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
           protein Y64G10A.7 protein.
          Length = 1651

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 396 CPHHSLTMSKVTVIYFFYCFECLN 467
           C HH L +SK+ V+  F+C + LN
Sbjct: 6   CTHHLLPVSKLMVLCKFFCVDILN 29


>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
            Y16B4A.2 protein.
          Length = 2105

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 66   DNTPRHLTRYLNERNTTAKTPQRIINSPAECAQIMW 173
            D TP+ LT  +++ N T     RIIN P   A +++
Sbjct: 1527 DVTPQPLTNVISQTNCTTGQTDRIINLPGLPADMLF 1562


>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
            Y16B4A.2 protein.
          Length = 2105

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 66   DNTPRHLTRYLNERNTTAKTPQRIINSPAECAQIMW 173
            D TP+ LT  +++ N T     RIIN P   A +++
Sbjct: 1527 DVTPQPLTNVISQTNCTTGQTDRIINLPGLPADMLF 1562


>U13070-21|AAC46647.1|  133|Caenorhabditis elegans Hypothetical
           protein F01F1.14 protein.
          Length = 133

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = +2

Query: 92  IFKRKEYY--CENSTENN*FPS*M-CSNNVELNSINSFFRQXNM 214
           +FK K+ Y  CENS E+N  P  M  S+N  L ++ +FF   N+
Sbjct: 9   LFKSKKKYKKCENSPESNKNPKKMSTSSNSFLITVIAFFVMINV 52


>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
            protein Y16B4A.2 protein.
          Length = 2105

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 66   DNTPRHLTRYLNERNTTAKTPQRIINSPAECAQIMW 173
            D TP+ LT  +++ N T     RIIN P   A +++
Sbjct: 1527 DVTPQPLTNVISQTNCTTGQTDRIINLPGLPADMLF 1562


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,529,348
Number of Sequences: 27780
Number of extensions: 227349
Number of successful extensions: 511
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)