Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_H19
(539 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96; Eukary... 159 3e-38
UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein... 136 3e-31
UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S riboso... 124 1e-27
UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa... 113 2e-24
UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;... 111 1e-23
UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92; Euka... 107 1e-22
UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=... 106 3e-22
UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, wh... 100 4e-20
UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2; ... 93 4e-18
UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2; T... 82 9e-15
UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole gen... 74 2e-12
UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17; Archa... 73 6e-12
UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga ... 71 2e-11
UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum... 68 2e-10
UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera... 66 5e-10
UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1; Sulfol... 64 2e-09
UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lambl... 62 6e-09
UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14; Archa... 61 1e-08
UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1; Os... 59 7e-08
UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Or... 55 1e-06
UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1; Encepha... 55 1e-06
UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2; Thermo... 52 6e-06
UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1; Nanoar... 52 8e-06
UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum... 50 3e-05
UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus Nit... 50 5e-05
UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9; Euryar... 44 0.003
UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillar... 43 0.004
UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S riboso... 42 0.007
UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9; Bacteri... 40 0.037
UniRef50_UPI0000DB7931 Cluster: PREDICTED: similar to shuttle cr... 37 0.34
UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18; Bacter... 34 2.4
UniRef50_UPI0000D56304 Cluster: PREDICTED: similar to CG3647-PA,... 33 3.2
UniRef50_UPI00015B4797 Cluster: PREDICTED: similar to nuclear tr... 33 4.2
UniRef50_UPI0000DA278B Cluster: PREDICTED: similar to nuclear tr... 33 5.6
UniRef50_Q00Y50 Cluster: Chromosome 12 contig 1, DNA sequence; n... 33 5.6
UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60; Bacter... 33 5.6
UniRef50_Q890Y9 Cluster: Conserved protein; n=12; Clostridia|Rep... 32 7.3
UniRef50_A4CYH5 Cluster: Putative uncharacterized protein; n=1; ... 32 7.3
UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome sh... 32 9.7
UniRef50_O66981 Cluster: Cytochrome c552; n=1; Aquifex aeolicus|... 32 9.7
UniRef50_A6M1U7 Cluster: Transcriptional regulator, GntR family;... 32 9.7
>UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96;
Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens
(Human)
Length = 145
Score = 159 bits (387), Expect = 3e-38
Identities = 74/105 (70%), Positives = 88/105 (83%)
Frame = +3
Query: 150 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANG 329
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+ VYRKK+V+YI R+Q EKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 330 ATAYVGIHPSKCVIVKLNMNKDRKAILDRRAKGXLAALGKXXGKY 464
T +VGIHPSK VI +L ++KDRK IL+R+AK +GK GKY
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKS--RQVGKEKGKY 135
Score = 59.3 bits (137), Expect = 6e-08
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein
L26 (Silica-induced gene 20 protein) (SIG-20)
(LOC668913), mRNA; n=2; Eutheria|Rep: similar to 60S
ribosomal protein L26 (Silica-induced gene 20 protein)
(SIG-20) (LOC668913), mRNA - Mus musculus
Length = 139
Score = 136 bits (329), Expect = 3e-31
Identities = 66/105 (62%), Positives = 83/105 (79%)
Frame = +3
Query: 150 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANG 329
P SKELRQK+NV+SMP +KDDEVQVVRGHY+GQQ+GKV+ VYRKK+V+YI +++ EKANG
Sbjct: 33 PLSKELRQKYNVQSMPTQKDDEVQVVRGHYEGQQIGKVVQVYRKKYVIYIKQVEREKANG 92
Query: 330 ATAYVGIHPSKCVIVKLNMNKDRKAILDRRAKGXLAALGKXXGKY 464
T VGIHPSK VI +L + +DRK IL+R+ +GK GKY
Sbjct: 93 TTVRVGIHPSKVVITRLKL-EDRKKILERK-------VGKEKGKY 129
Score = 46.4 bits (105), Expect = 4e-04
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MKFN VTS R K HF+APSHI R +MSSPL
Sbjct: 1 MKFNPFVTSDRSMKHKWHFNAPSHILRKIMSSPL 34
>UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S ribosomal
protein L26 (Silica-induced gene 20 protein) (SIG-20);
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: similar to
60S ribosomal protein L26 (Silica-induced gene 20
protein) (SIG-20) - Homo sapiens
Length = 127
Score = 124 bits (299), Expect = 1e-27
Identities = 62/102 (60%), Positives = 76/102 (74%), Gaps = 2/102 (1%)
Frame = +3
Query: 165 LRQKFNVKSMPIRKDDEVQVVR--GHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANGATA 338
L NV+SMP RKD+EVQVVR GHYKGQQ+G V+ VYRKK+V+YI +Q EKANG T
Sbjct: 18 LNAHINVQSMPNRKDNEVQVVRVRGHYKGQQIGTVVQVYRKKYVIYIEWVQQEKANGTTV 77
Query: 339 YVGIHPSKCVIVKLNMNKDRKAILDRRAKGXLAALGKXXGKY 464
+VGIHPSK VI +L ++KDRK I +++AK A GK GKY
Sbjct: 78 HVGIHPSKAVITRLKLDKDRKKIPEQKAKSHQA--GKEKGKY 117
>UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0151300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 113 bits (272), Expect = 2e-24
Identities = 54/90 (60%), Positives = 70/90 (77%)
Frame = +3
Query: 195 PIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANGATAYVGIHPSKCVIV 374
P+RKDDEVQVVRG YKG++ GKV+ VYR+++V+++ RI EK NG+T VGIHPSK V+
Sbjct: 58 PVRKDDEVQVVRGSYKGRE-GKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVT 116
Query: 375 KLNMNKDRKAILDRRAKGXLAALGKXXGKY 464
KL ++KDRKAILDR+A G A K GK+
Sbjct: 117 KLKLDKDRKAILDRKASG--RAADKAKGKF 144
>UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;
Trichocomaceae|Rep: Contig An11c0300, complete genome -
Aspergillus niger
Length = 134
Score = 111 bits (266), Expect = 1e-23
Identities = 54/100 (54%), Positives = 72/100 (72%)
Frame = +3
Query: 150 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANG 329
P S ELR K+NV+SMPIRKDDEV VVRG KG++ GKV VYR K+ +++ RI +K+NG
Sbjct: 34 PLSSELRAKYNVRSMPIRKDDEVMVVRGSNKGRE-GKVTSVYRLKWAIHVERISRDKSNG 92
Query: 330 ATAYVGIHPSKCVIVKLNMNKDRKAILDRRAKGXLAALGK 449
+ + +HPS VI KL+++KDR+AIL+R KG A K
Sbjct: 93 QSVPIPLHPSNVVIKKLHLDKDREAILERVGKGREAVKAK 132
Score = 41.9 bits (94), Expect = 0.009
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 62 NKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
N + SSRRK+R HF+APS RRV++S+PL
Sbjct: 5 NSSLASSRRKSRAAHFNAPSSERRVILSAPL 35
>UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92;
Eukaryota|Rep: 60S ribosomal protein L26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 127
Score = 107 bits (258), Expect = 1e-22
Identities = 48/90 (53%), Positives = 68/90 (75%)
Frame = +3
Query: 150 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANG 329
P SKELR ++ +K++PIR+DDEV VVRG KGQ+ GK+ VYR KF V + ++ EK NG
Sbjct: 34 PLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQE-GKISSVYRLKFAVQVDKVTKEKVNG 92
Query: 330 ATAYVGIHPSKCVIVKLNMNKDRKAILDRR 419
A+ + +HPSK VI KL+++KDRKA++ R+
Sbjct: 93 ASVPINLHPSKLVITKLHLDKDRKALIQRK 122
Score = 39.5 bits (88), Expect = 0.048
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +2
Query: 56 KFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
K + V+S RRK RK +F+APS RRVL+S+PL
Sbjct: 3 KQSLDVSSDRRKARKAYFTAPSSQRRVLLSAPL 35
>UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L26, putative -
Plasmodium vivax
Length = 156
Score = 106 bits (255), Expect = 3e-22
Identities = 45/89 (50%), Positives = 68/89 (76%)
Frame = +3
Query: 156 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANGAT 335
SKELR K+ +++P+RKDDEV + RGH G++ GKV+ + RK+F +Y+ R+ EKANG +
Sbjct: 64 SKELRLKYKTRALPVRKDDEVLICRGHNHGRE-GKVVKINRKRFKIYVERVTREKANGES 122
Query: 336 AYVGIHPSKCVIVKLNMNKDRKAILDRRA 422
++GIHPS ++ KL ++K+RK ILDR+A
Sbjct: 123 TFIGIHPSNVILTKLKIDKNRKKILDRKA 151
Score = 56.0 bits (129), Expect = 5e-07
Identities = 23/46 (50%), Positives = 37/46 (80%)
Frame = +2
Query: 17 VLSRVVLAKSDRMKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
+L++++ + +MKFNKQ++S+RRK RK HF+AP+ +RR +MSS L
Sbjct: 18 LLTQIIFSPFSKMKFNKQISSARRKMRKAHFTAPAGLRRKIMSSKL 63
>UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 144
Score = 99.5 bits (237), Expect = 4e-20
Identities = 46/98 (46%), Positives = 69/98 (70%)
Frame = +3
Query: 156 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANGAT 335
SK+LR+K+NV+++P+RKDDEV VVRG +KG + GKV VYRK++ + I ++ KANG
Sbjct: 35 SKDLRKKYNVRALPVRKDDEVTVVRGTHKGTK-GKVSSVYRKRWTIQIEKLTRTKANGMP 93
Query: 336 AYVGIHPSKCVIVKLNMNKDRKAILDRRAKGXLAALGK 449
+ I S+C+I K +N+DRK +L R+A ++ GK
Sbjct: 94 YQIPIRASQCIITKPYLNEDRKQLLARKASAKVSTKGK 131
Score = 33.9 bits (74), Expect = 2.4
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MK + +V+S RRK R+ APS++R LMS+ L
Sbjct: 1 MKTHVEVSSQRRKGRRAQLGAPSNLRYKLMSAHL 34
>UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L26 - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 93.1 bits (221), Expect = 4e-18
Identities = 45/90 (50%), Positives = 63/90 (70%)
Frame = +3
Query: 156 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANGAT 335
SKELR+K+NV ++PI KDDEV++++GH K GKV V R K+V+ I ++ KANG T
Sbjct: 35 SKELREKYNVIAIPIHKDDEVKIIKGHQK--VAGKVTAVRRSKYVINIDKLTKTKANGQT 92
Query: 336 AYVGIHPSKCVIVKLNMNKDRKAILDRRAK 425
V I PS +I KL +NKDR+A L ++A+
Sbjct: 93 VPVAIRPSNVIITKLFLNKDREAYLAKKAE 122
Score = 32.7 bits (71), Expect = 5.6
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MKFN +V+S+ K RK ++AP+ R +LMS+ L
Sbjct: 1 MKFNCKVSSNPSKARKALYTAPASQRAILMSARL 34
>UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24,
putative - Trichomonas vaginalis G3
Length = 138
Score = 81.8 bits (193), Expect = 9e-15
Identities = 39/98 (39%), Positives = 58/98 (59%)
Frame = +3
Query: 156 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANGAT 335
+KE + VK +PIR+DDEV + G + G++ GKV+ V + + + EK NG T
Sbjct: 36 NKEQAETHGVKQLPIRRDDEVSINSGKFAGRE-GKVIAVKLSENRIVVDSFTREKLNGQT 94
Query: 336 AYVGIHPSKCVIVKLNMNKDRKAILDRRAKGXLAALGK 449
+V +HPS C+I KL M+K RK +++RR G L K
Sbjct: 95 VHVSVHPSNCLITKLKMDKQRKELIERRRAGREKILAK 132
>UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 119
Score = 74.1 bits (174), Expect = 2e-12
Identities = 39/72 (54%), Positives = 51/72 (70%)
Frame = +3
Query: 105 ISVLLHI*GEC*CPLPCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKK 284
++ LLH E P S LR K+NV+SMPIRKDDEVQVVRG +KG++ GKV+ VY +K
Sbjct: 36 LTPLLHGVIELLMSAPLSTNLRSKYNVRSMPIRKDDEVQVVRGTFKGRE-GKVVQVYCQK 94
Query: 285 FVVYIXRIQXEK 320
V+++ RI EK
Sbjct: 95 RVIHVKRISHEK 106
>UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17;
Archaea|Rep: 50S ribosomal protein L24P - Methanopyrus
kandleri
Length = 149
Score = 72.5 bits (170), Expect = 6e-12
Identities = 34/86 (39%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +3
Query: 162 ELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANGATAY 341
ELR+KFN +S+P+R+ D V+++RG +KG + G+V+ V K+ +Y+ E+ANG Y
Sbjct: 35 ELRKKFNRRSLPVRRGDMVRIMRGDFKGHE-GEVVEVDLKRLRIYVEGATIERANGEKVY 93
Query: 342 VGIHPSKCVIVKLNMNKD-RKAILDR 416
IHPS +I++ N++ R+ I++R
Sbjct: 94 YPIHPSNVMIIEPNLDDPMRRKIIER 119
>UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L24 -
Caldivirga maquilingensis IC-167
Length = 143
Score = 70.5 bits (165), Expect = 2e-11
Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Frame = +3
Query: 150 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANG 329
P SK+L+++ ++ +P+R D V ++RG +KG + GKV V K+ +Y+ +K +G
Sbjct: 32 PLSKDLQRQLGIRRIPVRVGDTVLILRGDFKGTR-GKVTRVDYKRVRIYVDSASFKKPSG 90
Query: 330 ATAYVGIHPSKCVIVKLNM-NKDRKAILDRRAKGXLAALG 446
Y IHPSK VIV+L+ +K R A +D+ K A G
Sbjct: 91 EAVYYPIHPSKVVIVELDQSDKARVAAIDKTRKAREAKAG 130
>UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L24 - Thermofilum
pendens (strain Hrk 5)
Length = 131
Score = 67.7 bits (158), Expect = 2e-10
Identities = 36/92 (39%), Positives = 53/92 (57%)
Frame = +3
Query: 150 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANG 329
P S EL+QK +K + +RK D V +VRG +KG + GKV V KK +++ KA+G
Sbjct: 32 PLSAELQQKLGIKRIRVRKGDRVLIVRGSFKGHE-GKVTSVDVKKGRIHVEGATLRKADG 90
Query: 330 ATAYVGIHPSKCVIVKLNMNKDRKAILDRRAK 425
IHPSK V+ +L+++ R+ L R K
Sbjct: 91 TEVPFPIHPSKVVVTELDLSDPRRKELVERKK 122
>UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera
sedula DSM 5348|Rep: KOW domain protein - Metallosphaera
sedula DSM 5348
Length = 111
Score = 66.1 bits (154), Expect = 5e-10
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +3
Query: 150 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANG 329
P S EL +++ +K + IRKDD V+V+RG G + GKV V+ + + I + +KA+G
Sbjct: 9 PLSDELAKEYGMKRIGIRKDDTVRVMRGDNYGFE-GKVTQVFPESGRIAIEGLTRKKADG 67
Query: 330 ATAYVGIHPSKCVIVKLNMNKD-RKAILDRRA 422
Y+ IH SK I KLN N RK I++R+A
Sbjct: 68 TPVYIKIHASKVEITKLNTNDPRRKDIINRKA 99
>UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1;
Sulfolobus acidocaldarius|Rep: 50S ribosomal protein
L24P - Sulfolobus acidocaldarius
Length = 134
Score = 64.1 bits (149), Expect = 2e-09
Identities = 34/91 (37%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Frame = +3
Query: 156 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANGAT 335
S++L +++ +K + IRK D V+++RG G + GKV+ V RK+ V I + +KA+G
Sbjct: 30 SEDLEKQYGIKRISIRKGDSVKLMRGSQVGYE-GKVVEVDRKRGRVAIEGLTKKKADGTP 88
Query: 336 AYVGIHPSKCVIVKLNM-NKDRKAILDRRAK 425
YV +H SK +I KL+ +K+R ++R+ K
Sbjct: 89 VYVWVHASKVIITKLDTGDKERMDAIERKRK 119
>UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_22147_22554 - Giardia lamblia
ATCC 50803
Length = 135
Score = 62.5 bits (145), Expect = 6e-09
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Frame = +3
Query: 156 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANGAT 335
SKELR + +K+MPIR+ D V++ G +KG GKV+ V R+ + + + I + N
Sbjct: 35 SKELRAEHKIKTMPIRRGDIVEIFTGGHKG--TGKVVEVRRRDYKICVEGINQKARNPEA 92
Query: 336 AYV--GIHPSKCVIVKLNMNKDRKAILDRRAK---GXLAALGK 449
V IHPS C+I +L MN R + RR + LA +GK
Sbjct: 93 KPVPYPIHPSNCIIKELYMNGSRYRAIKRRQERNAERLARIGK 135
Score = 36.3 bits (80), Expect = 0.45
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MK N VT+SRRK RK +F+A + R +MSS L
Sbjct: 1 MKLNSAVTASRRKCRKAYFTANAETRAKMMSSRL 34
>UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14;
Archaea|Rep: 50S ribosomal protein L24P - Methanococcus
jannaschii
Length = 120
Score = 61.3 bits (142), Expect = 1e-08
Identities = 30/82 (36%), Positives = 52/82 (63%)
Frame = +3
Query: 156 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANGAT 335
SKEL++K ++P+RK D V+++RG +KG + G+V+ V K++ +Y+ ++ +G
Sbjct: 33 SKELKEKLGKNAIPVRKGDVVRIMRGDFKGLE-GEVIKVDLKRYRIYVEGANNKRQDGRE 91
Query: 336 AYVGIHPSKCVIVKLNMNKDRK 401
IHPS +I+KL +KD K
Sbjct: 92 VPYPIHPSNVMIIKL-YDKDEK 112
>UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative L24 ribosomal protein -
Ostreococcus tauri
Length = 154
Score = 58.8 bits (136), Expect = 7e-08
Identities = 27/58 (46%), Positives = 41/58 (70%)
Frame = +3
Query: 156 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANG 329
S EL+ + ++PIR +DEV+V RG +K ++ GKV+ VYRKK+V++I I +K NG
Sbjct: 54 SAELKAQHGANAVPIRVNDEVRVTRGSFKNRE-GKVVQVYRKKWVIHIANITRDKVNG 110
Score = 47.2 bits (107), Expect = 2e-04
Identities = 28/47 (59%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
Frame = +2
Query: 23 SRVVLAKSDR---MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
+RV LA S R MK++ VTSSRRK RK HF+APS RR LMS+ L
Sbjct: 7 TRVRLAVSLRRHAMKYSTAVTSSRRKTRKAHFTAPSSERRKLMSAAL 53
>UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein L26 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 54.8 bits (126), Expect = 1e-06
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +3
Query: 156 SKELRQKFNVKSMPIRKDDEVQVVRGHYKG 245
S ELR K+NV+S+PIRKDDEVQVVRG YKG
Sbjct: 35 SSELRHKYNVRSIPIRKDDEVQVVRGSYKG 64
Score = 50.0 bits (114), Expect = 3e-05
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MK N +VTSSRRK RK HF+APS +RRVLMS+ L
Sbjct: 1 MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAAL 34
>UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L26
- Encephalitozoon cuniculi
Length = 143
Score = 54.8 bits (126), Expect = 1e-06
Identities = 29/90 (32%), Positives = 49/90 (54%)
Frame = +3
Query: 156 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANGAT 335
S+ELR+++ ++ P+R D V V G + G++ G + + + + VYI K +G
Sbjct: 36 SRELRKEYGFRTFPLRTGDTVVVKGGKFDGKE-GVISKINYRDYKVYIEGCFVTKNDGTN 94
Query: 336 AYVGIHPSKCVIVKLNMNKDRKAILDRRAK 425
A V I+PSK I K + RK L+R+ +
Sbjct: 95 ALVPIYPSKLTITKFFLENGRKEQLERKKR 124
>UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2;
Thermoplasma|Rep: 50S ribosomal protein L24P -
Thermoplasma volcanium
Length = 145
Score = 52.4 bits (120), Expect = 6e-06
Identities = 30/82 (36%), Positives = 45/82 (54%)
Frame = +3
Query: 156 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANGAT 335
SK+LR+K+ ++S PI K D V+VV G KG+ GKV V +V + I K +G
Sbjct: 10 SKDLRKKYGIRSFPIVKGDVVKVVSGARKGEG-GKVAEVDHHSGLVIVEGITIAKIDGKQ 68
Query: 336 AYVGIHPSKCVIVKLNMNKDRK 401
GI P K I L++++ +
Sbjct: 69 KGFGISPEKLQITHLDLSRSER 90
>UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L24P -
Nanoarchaeum equitans
Length = 140
Score = 52.0 bits (119), Expect = 8e-06
Identities = 29/84 (34%), Positives = 54/84 (64%)
Frame = +3
Query: 150 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANG 329
P SKELR+K ++++PI+ D V+V RG+++G++ G+V+ + K + VY+ + ++
Sbjct: 44 PLSKELREKLGIRNVPIKVGDVVRVERGNFRGKE-GQVIDIDPKYYRVYLS-LDTDR--- 98
Query: 330 ATAYVGIHPSKCVIVKLNMNKDRK 401
HPSK I+KL+++ D+K
Sbjct: 99 ---QYPFHPSKLTIIKLDLS-DKK 118
>UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24 - Cenarchaeum
symbiosum
Length = 167
Score = 50.0 bits (114), Expect = 3e-05
Identities = 33/78 (42%), Positives = 41/78 (52%)
Frame = +3
Query: 150 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANG 329
P SKELR K+ +S+ + + D V VVRG YK GKV V + V I I+ EK G
Sbjct: 26 PLSKELRAKYGKRSVRVVEGDTVSVVRGEYKDID-GKVSHVDTESGSVAIEGIKKEKGKG 84
Query: 330 ATAYVGIHPSKCVIVKLN 383
V I SK V+ LN
Sbjct: 85 DKFDVLIRASKVVVTGLN 102
>UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: KOW domain protein -
Candidatus Nitrosopumilus maritimus SCM1
Length = 168
Score = 49.6 bits (113), Expect = 5e-05
Identities = 27/76 (35%), Positives = 42/76 (55%)
Frame = +3
Query: 156 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANGAT 335
SK+L++K+ +S+ + + D V ++RG +KG GKV V K V I ++ EK G
Sbjct: 28 SKDLQKKYGKRSVRVNEGDSVTILRGEFKGVD-GKVAEVSTAKSSVAIEGVKKEKTKGDK 86
Query: 336 AYVGIHPSKCVIVKLN 383
V IH S ++ LN
Sbjct: 87 FDVFIHTSNLLVTSLN 102
>UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 122
Score = 43.6 bits (98), Expect = 0.003
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +3
Query: 156 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANGAT 335
S+ L +++ +S + D V+++RG +KG + GKV V + + + K +G
Sbjct: 36 SEALAKQYGTRSAAVITGDTVKIMRGDFKGTE-GKVQSVSLMDGTIAVDGVISTKVDGTE 94
Query: 336 AYVGIHPSKCVIVKLNMNKDRKA 404
I+PS +I KL M R+A
Sbjct: 95 VPRPINPSNVMITKLEMKDGRRA 117
>UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillardia
theta|Rep: 60S ribosomal protein L26 - Guillardia theta
(Cryptomonas phi)
Length = 108
Score = 43.2 bits (97), Expect = 0.004
Identities = 21/75 (28%), Positives = 44/75 (58%)
Frame = +3
Query: 156 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANGAT 335
SKE+++ K++ ++K+ E++V RG +KG + GKV+ + ++ +++ I K
Sbjct: 35 SKEMQKYHKKKTLILKKNYEIKVKRGDFKG-KTGKVIQIKPEQQKIFVDNIFRNKFEKTN 93
Query: 336 AYVGIHPSKCVIVKL 380
+V + PS I+K+
Sbjct: 94 IFVPLKPSNIQIIKI 108
>UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S ribosomal
protein L26-like 1; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L26-like 1 -
Canis familiaris
Length = 165
Score = 42.3 bits (95), Expect = 0.007
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSP 151
M FN +T NRKRH +APSH+RR +MSSP
Sbjct: 97 MNFNPFLTWGCSTNRKRHVNAPSHVRRNIMSSP 129
>UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9;
Bacteria|Rep: 50S ribosomal protein L24 - Desulfovibrio
desulfuricans (strain G20)
Length = 107
Score = 39.9 bits (89), Expect = 0.037
Identities = 24/58 (41%), Positives = 34/58 (58%)
Frame = +3
Query: 183 VKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANGATAYVGIHP 356
+K IRKDD+V V+ G KG ++GKV+ V RKK R+ EK N A ++ +P
Sbjct: 1 MKQFRIRKDDKVMVISGKDKG-KIGKVLKVLRKK-----DRVLVEKVNVAKRHMRANP 52
>UniRef50_UPI0000DB7931 Cluster: PREDICTED: similar to shuttle craft
CG3647-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to shuttle craft CG3647-PA, isoform A
- Apis mellifera
Length = 1087
Score = 36.7 bits (81), Expect = 0.34
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -3
Query: 468 RCIYXCXCQVQPVCPLLCDRGLLCGLYSCST*QSHTLKGECR 343
+C C +++ +CPL+C + L CG + C + KG C+
Sbjct: 652 KCNQLCCIEIEHICPLICSKTLSCGRHKC---EQRCHKGRCQ 690
>UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18;
Bacteria|Rep: 50S ribosomal protein L24 - Thermus
thermophilus
Length = 110
Score = 33.9 bits (74), Expect = 2.4
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +3
Query: 192 MPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEK 320
M ++K D V V G YKG +VGKV V KK+ V + + K
Sbjct: 5 MHVKKGDTVLVASGKYKG-RVGKVKEVLPKKYAVIVEGVNIVK 46
>UniRef50_UPI0000D56304 Cluster: PREDICTED: similar to CG3647-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG3647-PA, isoform A - Tribolium castaneum
Length = 958
Score = 33.5 bits (73), Expect = 3.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 468 RCIYXCXCQVQPVCPLLCDRGLLCGLYSC 382
RC C +++ +CPL C+ L CG + C
Sbjct: 540 RCNQRCCIEIEHICPLPCNHMLACGQHRC 568
>UniRef50_UPI00015B4797 Cluster: PREDICTED: similar to nuclear
transcription factor, x-box binding 1 (nfx1); n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to nuclear
transcription factor, x-box binding 1 (nfx1) - Nasonia
vitripennis
Length = 1323
Score = 33.1 bits (72), Expect = 4.2
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = -3
Query: 468 RCIYXCXCQVQPVCPLLCDRGLLCGLYSCST*QSHTLKGECRHMLLHHWPFLFESXQC 295
+C C ++ +CPL C + L CG + C + +G C++ W F+ C
Sbjct: 875 KCNQKCCIDIEHICPLPCSKTLSCGRHKC---EQTCHRGRCQNC----WRSSFDELYC 925
>UniRef50_UPI0000DA278B Cluster: PREDICTED: similar to nuclear
transcription factor, X-box binding 1; n=1; Rattus
norvegicus|Rep: PREDICTED: similar to nuclear
transcription factor, X-box binding 1 - Rattus
norvegicus
Length = 1158
Score = 32.7 bits (71), Expect = 5.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 468 RCIYXCXCQVQPVCPLLCDRGLLCGLYSC 382
+C C + CPL+C R L CGL+ C
Sbjct: 736 KCNEICCVDKEHKCPLICGRKLRCGLHRC 764
>UniRef50_Q00Y50 Cluster: Chromosome 12 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 12 contig 1, DNA
sequence - Ostreococcus tauri
Length = 66
Score = 32.7 bits (71), Expect = 5.6
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = -2
Query: 418 LRSRIALRSLFMFNLTITHFEG*MPTYAVAPLA 320
LR++ ALRSL M++L + H +G PT+ P++
Sbjct: 16 LRAKRALRSLSMWSLVMMHLDGSTPTWICVPVS 48
>UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60;
Bacteria|Rep: 50S ribosomal protein L24 - Rickettsia
prowazekii
Length = 113
Score = 32.7 bits (71), Expect = 5.6
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +3
Query: 192 MPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEK 320
+ ++K DEV ++ G YKG++ GKV+ V+ ++ V + + K
Sbjct: 4 LKVKKGDEVVIITGKYKGKK-GKVLKVFPEENTVVVSGVNLVK 45
>UniRef50_Q890Y9 Cluster: Conserved protein; n=12; Clostridia|Rep:
Conserved protein - Clostridium tetani
Length = 318
Score = 32.3 bits (70), Expect = 7.3
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = -1
Query: 308 NPXNVYNKLFTIHXHHFANLLAFVVSTYNLNFIVFANRHGFYIEFLS*FLRAGERTSTLA 129
NP Y+ F + +AN L+ ++++Y LN V + F I +++ GE+ S L
Sbjct: 147 NPEKTYHLEFVTNNEMYANKLSELINSYGLNSKVIQRKSNFII-----YIKEGEQISDLL 201
Query: 128 LYVKEH 111
+ H
Sbjct: 202 NIIGAH 207
>UniRef50_A4CYH5 Cluster: Putative uncharacterized protein; n=1;
Synechococcus sp. WH 7805|Rep: Putative uncharacterized
protein - Synechococcus sp. (strain WH7805)
Length = 260
Score = 32.3 bits (70), Expect = 7.3
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -1
Query: 494 GLHGCGSFLGVFTXVFAKCSQXALCSAIEDCFAVFIHVQLDNHTL 360
GL GCG F FT + K + A S +D F+ F+ L ++ +
Sbjct: 68 GLDGCGKFFRSFTKLHPKSASLAYGSKSKDSFSYFLDFTLSHNLI 112
>UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 2
SCAF14705, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2759
Score = 31.9 bits (69), Expect = 9.7
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -3
Query: 507 YLFKRPPWLWQFPRCIYXCXCQVQPVCPLLCDRGLLCG 394
YL P W W FP + ++Q +CP DR L CG
Sbjct: 2559 YLMNNPSWSWVFPPDL----LRLQRMCPEKMDRFLCCG 2592
>UniRef50_O66981 Cluster: Cytochrome c552; n=1; Aquifex
aeolicus|Rep: Cytochrome c552 - Aquifex aeolicus
Length = 166
Score = 31.9 bits (69), Expect = 9.7
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = +1
Query: 40 EERQNEVQQAGDFLKKEKQEEAFQ---CSFTYKASVDVLSPALR 162
+E Q +V QAG EK + FQ C F ++ +VD + P+L+
Sbjct: 64 QEEQKQVAQAGGAGNPEKGKAIFQQKGCGFCHQPAVDTVGPSLK 107
>UniRef50_A6M1U7 Cluster: Transcriptional regulator, GntR family;
n=1; Clostridium beijerinckii NCIMB 8052|Rep:
Transcriptional regulator, GntR family - Clostridium
beijerinckii NCIMB 8052
Length = 235
Score = 31.9 bits (69), Expect = 9.7
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 147 LPCSKELRQKFNVKSMPIRKDDEVQVVRGH-YKGQQVGKVMXVYRK 281
LP +EL +KFNV IRK E+ V +G+ Y+ Q G + + K
Sbjct: 27 LPTEEELIKKFNVSKNTIRKAIEILVTKGYVYRVQGSGIFLREFAK 72
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,269,290
Number of Sequences: 1657284
Number of extensions: 9274032
Number of successful extensions: 21898
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 21201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21872
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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