Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_H19
(539 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26 pro... 159 4e-39
CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein. 159 4e-39
BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein. 159 4e-39
BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-l... 159 4e-39
BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-l... 159 4e-39
AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26 p... 159 4e-39
L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26 pro... 157 2e-38
BC012151-1|AAH12151.1| 1120|Homo sapiens nuclear transcription f... 33 0.84
BC006447-1|AAH06447.1| 681|Homo sapiens NFX1 protein protein. 33 0.84
AL356472-7|CAH72747.3| 833|Homo sapiens nuclear transcription f... 33 0.84
AL356472-6|CAH72746.1| 1120|Homo sapiens nuclear transcription f... 33 0.84
AL356472-5|CAH72745.1| 1024|Homo sapiens nuclear transcription f... 33 0.84
AL356218-4|CAI13305.1| 1120|Homo sapiens nuclear transcription f... 33 0.84
AL356218-3|CAI13304.1| 1024|Homo sapiens nuclear transcription f... 33 0.84
AF332009-1|AAK16545.1| 1024|Homo sapiens nuclear transcription f... 33 0.84
U15306-1|AAA69517.1| 1104|Homo sapiens NFX1 protein. 31 3.4
>X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 159 bits (387), Expect = 4e-39
Identities = 74/105 (70%), Positives = 88/105 (83%)
Frame = +3
Query: 150 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANG 329
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+ VYRKK+V+YI R+Q EKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 330 ATAYVGIHPSKCVIVKLNMNKDRKAILDRRAKGXLAALGKXXGKY 464
T +VGIHPSK VI +L ++KDRK IL+R+AK +GK GKY
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKS--RQVGKEKGKY 135
Score = 59.3 bits (137), Expect = 9e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein.
Length = 145
Score = 159 bits (387), Expect = 4e-39
Identities = 74/105 (70%), Positives = 88/105 (83%)
Frame = +3
Query: 150 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANG 329
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+ VYRKK+V+YI R+Q EKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 330 ATAYVGIHPSKCVIVKLNMNKDRKAILDRRAKGXLAALGKXXGKY 464
T +VGIHPSK VI +L ++KDRK IL+R+AK +GK GKY
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKS--RQVGKEKGKY 135
Score = 59.3 bits (137), Expect = 9e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein.
Length = 145
Score = 159 bits (387), Expect = 4e-39
Identities = 74/105 (70%), Positives = 88/105 (83%)
Frame = +3
Query: 150 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANG 329
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+ VYRKK+V+YI R+Q EKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 330 ATAYVGIHPSKCVIVKLNMNKDRKAILDRRAKGXLAALGKXXGKY 464
T +VGIHPSK VI +L ++KDRK IL+R+AK +GK GKY
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKS--RQVGKEKGKY 135
Score = 59.3 bits (137), Expect = 9e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 159 bits (387), Expect = 4e-39
Identities = 74/105 (70%), Positives = 88/105 (83%)
Frame = +3
Query: 150 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANG 329
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+ VYRKK+V+YI R+Q EKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 330 ATAYVGIHPSKCVIVKLNMNKDRKAILDRRAKGXLAALGKXXGKY 464
T +VGIHPSK VI +L ++KDRK IL+R+AK +GK GKY
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKS--RQVGKEKGKY 135
Score = 58.8 bits (136), Expect = 1e-08
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MKFN VTS R KNRKRHF+APSH+RR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPL 34
>BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 159 bits (387), Expect = 4e-39
Identities = 74/105 (70%), Positives = 88/105 (83%)
Frame = +3
Query: 150 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANG 329
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+ VYRKK+V+YI R+Q EKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 330 ATAYVGIHPSKCVIVKLNMNKDRKAILDRRAKGXLAALGKXXGKY 464
T +VGIHPSK VI +L ++KDRK IL+R+AK +GK GKY
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKS--RQVGKEKGKY 135
Score = 58.8 bits (136), Expect = 1e-08
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MKFN VTS R KNRKRHF+APSH+RR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPL 34
>AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 159 bits (387), Expect = 4e-39
Identities = 74/105 (70%), Positives = 88/105 (83%)
Frame = +3
Query: 150 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANG 329
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+ VYRKK+V+YI R+Q EKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 330 ATAYVGIHPSKCVIVKLNMNKDRKAILDRRAKGXLAALGKXXGKY 464
T +VGIHPSK VI +L ++KDRK IL+R+AK +GK GKY
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKS--RQVGKEKGKY 135
Score = 59.3 bits (137), Expect = 9e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 157 bits (381), Expect = 2e-38
Identities = 73/105 (69%), Positives = 87/105 (82%)
Frame = +3
Query: 150 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANG 329
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+ VYRKK+V+YI R+Q EKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 330 ATAYVGIHPSKCVIVKLNMNKDRKAILDRRAKGXLAALGKXXGKY 464
T +VGIHPSK VI +L ++KDRK IL+R+AK +GK KY
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKS--RQVGKEKSKY 135
Score = 59.3 bits (137), Expect = 9e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>BC012151-1|AAH12151.1| 1120|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1120
Score = 32.7 bits (71), Expect = 0.84
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 468 RCIYXCXCQVQPVCPLLCDRGLLCGLYSC 382
+C C + CPL+C R L CGL+ C
Sbjct: 698 KCNEICCVDKEHKCPLICGRKLRCGLHRC 726
>BC006447-1|AAH06447.1| 681|Homo sapiens NFX1 protein protein.
Length = 681
Score = 32.7 bits (71), Expect = 0.84
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 468 RCIYXCXCQVQPVCPLLCDRGLLCGLYSC 382
+C C + CPL+C R L CGL+ C
Sbjct: 582 KCNEICCVDKEHKCPLICGRKLRCGLHRC 610
>AL356472-7|CAH72747.3| 833|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 833
Score = 32.7 bits (71), Expect = 0.84
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 468 RCIYXCXCQVQPVCPLLCDRGLLCGLYSC 382
+C C + CPL+C R L CGL+ C
Sbjct: 698 KCNEICCVDKEHKCPLICGRKLRCGLHRC 726
>AL356472-6|CAH72746.1| 1120|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1120
Score = 32.7 bits (71), Expect = 0.84
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 468 RCIYXCXCQVQPVCPLLCDRGLLCGLYSC 382
+C C + CPL+C R L CGL+ C
Sbjct: 698 KCNEICCVDKEHKCPLICGRKLRCGLHRC 726
>AL356472-5|CAH72745.1| 1024|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1024
Score = 32.7 bits (71), Expect = 0.84
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 468 RCIYXCXCQVQPVCPLLCDRGLLCGLYSC 382
+C C + CPL+C R L CGL+ C
Sbjct: 698 KCNEICCVDKEHKCPLICGRKLRCGLHRC 726
>AL356218-4|CAI13305.1| 1120|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1120
Score = 32.7 bits (71), Expect = 0.84
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 468 RCIYXCXCQVQPVCPLLCDRGLLCGLYSC 382
+C C + CPL+C R L CGL+ C
Sbjct: 698 KCNEICCVDKEHKCPLICGRKLRCGLHRC 726
>AL356218-3|CAI13304.1| 1024|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1024
Score = 32.7 bits (71), Expect = 0.84
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 468 RCIYXCXCQVQPVCPLLCDRGLLCGLYSC 382
+C C + CPL+C R L CGL+ C
Sbjct: 698 KCNEICCVDKEHKCPLICGRKLRCGLHRC 726
>AF332009-1|AAK16545.1| 1024|Homo sapiens nuclear transcription
factor NFX2 protein.
Length = 1024
Score = 32.7 bits (71), Expect = 0.84
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 468 RCIYXCXCQVQPVCPLLCDRGLLCGLYSC 382
+C C + CPL+C R L CGL+ C
Sbjct: 698 KCNEICCVDKEHKCPLICGRKLRCGLHRC 726
>U15306-1|AAA69517.1| 1104|Homo sapiens NFX1 protein.
Length = 1104
Score = 30.7 bits (66), Expect = 3.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 468 RCIYXCXCQVQPVCPLLCDRGLLCGLYSC 382
+C C + CPL C R L CGL+ C
Sbjct: 682 KCNEICCVDKEHKCPLNCGRKLRCGLHRC 710
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,774,477
Number of Sequences: 237096
Number of extensions: 1443193
Number of successful extensions: 2954
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2953
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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