Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_H19
(539 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071133-1|AAL48755.1| 149|Drosophila melanogaster RE17611p pro... 169 3e-42
AE014296-3077|AAF49215.1| 149|Drosophila melanogaster CG6846-PA... 169 3e-42
U09306-1|AAB60255.1| 1106|Drosophila melanogaster shuttle craft ... 31 1.0
AF145679-1|AAD38654.1| 1106|Drosophila melanogaster BcDNA.LD2272... 31 1.0
AE014134-2570|AAN10891.1| 1099|Drosophila melanogaster CG3647-PA... 31 1.0
AE014134-2569|AAF53441.2| 1106|Drosophila melanogaster CG3647-PB... 31 1.0
BT003208-1|AAO24963.1| 478|Drosophila melanogaster SD23764p pro... 29 3.1
AE013599-1621|AAF58436.2| 478|Drosophila melanogaster CG3884-PA... 29 3.1
>AY071133-1|AAL48755.1| 149|Drosophila melanogaster RE17611p
protein.
Length = 149
Score = 169 bits (410), Expect = 3e-42
Identities = 77/105 (73%), Positives = 89/105 (84%)
Frame = +3
Query: 150 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANG 329
P SKELRQK+NV+SMPIR+DDEVQV+RGH+KG QVGKV+ YRKKFVVY+ +IQ E ANG
Sbjct: 33 PLSKELRQKYNVRSMPIRRDDEVQVIRGHFKGNQVGKVVQAYRKKFVVYVEKIQRENANG 92
Query: 330 ATAYVGIHPSKCVIVKLNMNKDRKAILDRRAKGXLAALGKXXGKY 464
YVGIHPSK +IVKL ++KDRKAIL+RR KG LAALGK GKY
Sbjct: 93 TNVYVGIHPSKVLIVKLKLDKDRKAILERRGKGRLAALGKDKGKY 137
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MK N V+SSRRKNRKRHF APSHIRR LMS+PL
Sbjct: 1 MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPL 34
>AE014296-3077|AAF49215.1| 149|Drosophila melanogaster CG6846-PA
protein.
Length = 149
Score = 169 bits (410), Expect = 3e-42
Identities = 77/105 (73%), Positives = 89/105 (84%)
Frame = +3
Query: 150 PCSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMXVYRKKFVVYIXRIQXEKANG 329
P SKELRQK+NV+SMPIR+DDEVQV+RGH+KG QVGKV+ YRKKFVVY+ +IQ E ANG
Sbjct: 33 PLSKELRQKYNVRSMPIRRDDEVQVIRGHFKGNQVGKVVQAYRKKFVVYVEKIQRENANG 92
Query: 330 ATAYVGIHPSKCVIVKLNMNKDRKAILDRRAKGXLAALGKXXGKY 464
YVGIHPSK +IVKL ++KDRKAIL+RR KG LAALGK GKY
Sbjct: 93 TNVYVGIHPSKVLIVKLKLDKDRKAILERRGKGRLAALGKDKGKY 137
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MK N V+SSRRKNRKRHF APSHIRR LMS+PL
Sbjct: 1 MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPL 34
>U09306-1|AAB60255.1| 1106|Drosophila melanogaster shuttle craft
protein protein.
Length = 1106
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 468 RCIYXCXCQVQPVCPLLCDRGLLCGLYSC 382
+C C + CPL C+R L CG + C
Sbjct: 710 KCNVECCIDIDHDCPLPCNRTLSCGKHKC 738
>AF145679-1|AAD38654.1| 1106|Drosophila melanogaster BcDNA.LD22726
protein.
Length = 1106
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 468 RCIYXCXCQVQPVCPLLCDRGLLCGLYSC 382
+C C + CPL C+R L CG + C
Sbjct: 710 KCNVECCIDIDHDCPLPCNRTLSCGKHKC 738
>AE014134-2570|AAN10891.1| 1099|Drosophila melanogaster CG3647-PA,
isoform A protein.
Length = 1099
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 468 RCIYXCXCQVQPVCPLLCDRGLLCGLYSC 382
+C C + CPL C+R L CG + C
Sbjct: 703 KCNVECCIDIDHDCPLPCNRTLSCGKHKC 731
>AE014134-2569|AAF53441.2| 1106|Drosophila melanogaster CG3647-PB,
isoform B protein.
Length = 1106
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 468 RCIYXCXCQVQPVCPLLCDRGLLCGLYSC 382
+C C + CPL C+R L CG + C
Sbjct: 710 KCNVECCIDIDHDCPLPCNRTLSCGKHKC 738
>BT003208-1|AAO24963.1| 478|Drosophila melanogaster SD23764p
protein.
Length = 478
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 207 DDEVQVVRGHYKGQQ-VGKVMXVYRKKFVVY 296
D V + RGHY+G +GK+ V+R F+ +
Sbjct: 98 DQPVYIGRGHYEGHLIIGKISSVHRALFIAF 128
>AE013599-1621|AAF58436.2| 478|Drosophila melanogaster CG3884-PA,
isoform A protein.
Length = 478
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 207 DDEVQVVRGHYKGQQ-VGKVMXVYRKKFVVY 296
D V + RGHY+G +GK+ V+R F+ +
Sbjct: 98 DQPVYIGRGHYEGHLIIGKISSVHRALFIAF 128
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,377,416
Number of Sequences: 53049
Number of extensions: 467992
Number of successful extensions: 1043
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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