Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_H14
(403 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0934 - 12513810-12513834,12513918-12513970,12514212-125145... 172 1e-43
03_05_0125 - 21039767-21039791,21039876-21039922,21040220-210405... 171 2e-43
12_02_1042 + 25638585-25638711,25639585-25639745,25639873-256400... 31 0.34
02_04_0038 - 19110520-19110574,19110684-19110811,19110912-191110... 31 0.34
04_04_1687 - 35365766-35366356,35367137-35368135 29 1.8
04_03_0227 + 12979635-12980363,12980439-12980474,12980604-129808... 29 1.8
03_02_0596 + 9714022-9714065,9714799-9714868,9714978-9715883,971... 29 1.8
07_03_1439 - 26556398-26556418,26556700-26557743 28 2.4
04_03_0266 + 13648287-13649099,13649186-13649524 28 2.4
10_06_0028 - 9802362-9802475,9802919-9803090,9803167-9803208,980... 28 3.2
02_05_1290 - 35500515-35500897,35501560-35502031,35502174-35502212 28 3.2
02_05_1287 - 35459419-35459955,35460043-35460966,35461881-354622... 28 3.2
02_03_0300 + 17454622-17455402,17455535-17456977,17457015-174573... 28 3.2
12_01_0476 + 3738526-3738567,3738695-3738739,3739240-3739601,373... 27 4.2
10_08_0601 + 19103745-19105162,19105253-19105717,19106314-19106539 27 5.6
12_02_0584 + 20819822-20820970,20821394-20821618,20821776-208219... 27 7.3
05_07_0333 - 29351372-29351665,29351786-29351928,29352374-293524... 27 7.3
02_05_1288 + 35466544-35466579,35466691-35467590,35467695-35468231 27 7.3
06_01_0027 - 271199-271424,271628-272095,272721-273018,273133-27... 26 9.7
01_06_0235 - 27747908-27749023 26 9.7
01_05_0450 + 22357006-22357323,22357365-22357713,22358175-22358416 26 9.7
01_01_0106 + 788967-789555,790139-790162,790339-791411 26 9.7
>03_02_0934 -
12513810-12513834,12513918-12513970,12514212-12514525,
12514608-12514730,12515710-12515821
Length = 208
Score = 172 bits (418), Expect = 1e-43
Identities = 77/125 (61%), Positives = 93/125 (74%)
Frame = +3
Query: 27 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 206
M SLKLQKRLAASV++CGK KVWLDPNE+NEI+ NSRQNIRK++KDG +IKKP +HSR
Sbjct: 1 MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60
Query: 207 ARVRKNTEARXKGRHCGFGKRRGTANARMPXKELWXXXXXXXXXXXXXYXTAKKIDRHLY 386
+R R+ EA+ KGRH G+GKRRGT AR+P K LW Y AKKID+H+Y
Sbjct: 61 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY 120
Query: 387 HSLYM 401
H +YM
Sbjct: 121 HDMYM 125
>03_05_0125 -
21039767-21039791,21039876-21039922,21040220-21040533,
21040613-21040735,21041599-21041710
Length = 206
Score = 171 bits (415), Expect = 2e-43
Identities = 76/125 (60%), Positives = 93/125 (74%)
Frame = +3
Query: 27 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 206
M SLKLQKRLA+SV++CGK KVWLDPNE+NEI+ NSRQNIRK++KDG +IKKP +HSR
Sbjct: 1 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60
Query: 207 ARVRKNTEARXKGRHCGFGKRRGTANARMPXKELWXXXXXXXXXXXXXYXTAKKIDRHLY 386
+R R+ EA+ KGRH G+GKRRGT AR+P K LW Y AKKID+H+Y
Sbjct: 61 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY 120
Query: 387 HSLYM 401
H +YM
Sbjct: 121 HDMYM 125
>12_02_1042 +
25638585-25638711,25639585-25639745,25639873-25640064,
25640221-25640315,25640645-25640807,25640905-25641015,
25641611-25642741,25642813-25642965,25643060-25643159,
25643333-25643427,25643508-25643681,25643751-25643807,
25643887-25643958,25644151-25644249,25644320-25644451,
25644549-25644722,25644830-25644957,25645065-25645119
Length = 1072
Score = 31.1 bits (67), Expect = 0.34
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 42 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRAR 212
LQ+ L + K W D E+N + + R + KM+ D LV+ +A H
Sbjct: 748 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 805
Query: 213 VRKNTEARXKGRHCGFG 263
+ T KGR GFG
Sbjct: 806 DEETTSISRKGRAQGFG 822
>02_04_0038 -
19110520-19110574,19110684-19110811,19110912-19111085,
19111189-19111320,19111391-19111489,19111680-19111751,
19111831-19111887,19111957-19112130,19112211-19112305,
19112478-19112577,19112672-19112824,19112896-19114026,
19114621-19114731,19114829-19114991,19115364-19115458,
19115613-19115804,19115929-19116069
Length = 1023
Score = 31.1 bits (67), Expect = 0.34
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +3
Query: 42 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRAR 212
LQ+ L + K W D E+N + + R + KM+ D LV+ +A H
Sbjct: 699 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 756
Query: 213 VRKNTEARXKGRHCGFG 263
+ T KGR GFG
Sbjct: 757 DEETTSISRKGRAQGFG 773
>04_04_1687 - 35365766-35366356,35367137-35368135
Length = 529
Score = 28.7 bits (61), Expect = 1.8
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 176 HQETCSSPLPRPCPQKHR 229
H E C +PLP P P HR
Sbjct: 53 HAEQCPAPLPDPLPSAHR 70
>04_03_0227 +
12979635-12980363,12980439-12980474,12980604-12980873,
12980962-12981099,12981347-12981795,12981885-12982055,
12982136-12982370
Length = 675
Score = 28.7 bits (61), Expect = 1.8
Identities = 20/59 (33%), Positives = 24/59 (40%)
Frame = +3
Query: 9 DLTAVRMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKK 185
DL VR L K V R LDP +NE N R N+ IKD L ++
Sbjct: 528 DLYRVRAIDTNLLKLTWKHVHRKAPHVALLDPAVVNETTLKNDRANMMGYIKDCLFARQ 586
>03_02_0596 +
9714022-9714065,9714799-9714868,9714978-9715883,
9715973-9716146,9716260-9716373,9716975-9717033,
9717170-9717236,9717305-9717356,9718070-9718488,
9718786-9718847,9719305-9719374,9719730-9719831,
9719933-9720063,9720492-9720606,9720792-9720827
Length = 806
Score = 28.7 bits (61), Expect = 1.8
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 111 INEIANTNSRQNIRKMIKDGLVIK-KPVAVHSRARVRKNTEARXKGRHCGFGKRRGTAN 284
+ E N NS + + GL+ + KP+ V S RVR + K GK R TAN
Sbjct: 198 LGEANNDNSEKLEELFLDKGLLDELKPIRVESGKRVRASIRIIEKMMSSRVGKIRNTAN 256
>07_03_1439 - 26556398-26556418,26556700-26557743
Length = 354
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 3 ALDLTAVRMSSLKLQKRLAASVMRCGKKKVWLDPNEIN 116
AL +R SL++ + LAA+ +R G+ + L PN ++
Sbjct: 61 ALSFAGLRALSLRVARALAAAGLRRGRVALLLSPNSLH 98
>04_03_0266 + 13648287-13649099,13649186-13649524
Length = 383
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 81 KKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 227
K+K+ L +E ++ T R+ RK+ K + KK + H ++RK++
Sbjct: 320 KRKLVLSDDEGDDAEKTRDRETTRKLPKQA-IPKKKTSSHPMPKIRKSS 367
>10_06_0028 -
9802362-9802475,9802919-9803090,9803167-9803208,
9803344-9804011,9804098-9804418,9804495-9804833,
9804856-9805109,9805300-9805510
Length = 706
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 96 LDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVH 200
LDP +NE N R NI IKD L ++ +H
Sbjct: 628 LDPAVVNETTLKNDRANIVDYIKDCLFARQRQGLH 662
>02_05_1290 - 35500515-35500897,35501560-35502031,35502174-35502212
Length = 297
Score = 27.9 bits (59), Expect = 3.2
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +3
Query: 18 AVRMSSLKLQKRLAASVMRCGKK---KVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKP 188
AV + ++ L R V++C ++ K+ + P+ + ++ +RK I +GLV+ P
Sbjct: 236 AVNLENISLHDR---KVLKCCEELDPKIKVAPSRYPQ--TIEEQELLRKQITEGLVMASP 290
Query: 189 VAVHSRA 209
AVH R+
Sbjct: 291 HAVHFRS 297
>02_05_1287 -
35459419-35459955,35460043-35460966,35461881-35462268,
35463645-35463748,35464740-35464928,35465231-35465362
Length = 757
Score = 27.9 bits (59), Expect = 3.2
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +3
Query: 18 AVRMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAV 197
AV + + L R A K+ + P+ + N ++ +RK I +GLV+ P +
Sbjct: 696 AVNLEDISLYDRKALECCEDLDPKIKVAPSRYPQ--NIVEQELLRKQITEGLVMASPHVI 753
Query: 198 HSRA 209
H R+
Sbjct: 754 HFRS 757
>02_03_0300 +
17454622-17455402,17455535-17456977,17457015-17457317,
17458429-17458519,17458623-17459757,17459998-17460077,
17460449-17460533,17460614-17460705,17461079-17461147,
17461227-17461263,17461351-17461433,17461695-17461840,
17461868-17462138,17462245-17462281,17462428-17462721
Length = 1648
Score = 27.9 bits (59), Expect = 3.2
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 81 KKKVWLDPN-EINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARXK 242
K KVW P E+ + +R + +K + +KP A R RVRK TEA K
Sbjct: 681 KPKVWSRPRKEVEPVGKPKARGHPKKQAEPD---EKPKA---RGRVRKTTEANGK 729
>12_01_0476 +
3738526-3738567,3738695-3738739,3739240-3739601,
3739691-3740057,3740490-3740555,3741630-3741743
Length = 331
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 51 RLAASVMRCGKKKVWLDPNEINEIA--NTNSRQNIRKMIKDGLV 176
R A RC + LDPNEI ++ SR+ + +++ G++
Sbjct: 236 RFALHCRRCERDATPLDPNEIKHVSPYGITSREQVLEVVARGIL 279
>10_08_0601 + 19103745-19105162,19105253-19105717,19106314-19106539
Length = 702
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 128 HQLQTEHP*DDQGWSRHQETCSSPLPRPCPQKHRGTXKGSSLWLW*EKRY 277
H ++++P D W + E C +PLP ++G G +L W ++ +
Sbjct: 462 HICKSDNP--DAAWYKQMEACVTPLPE---VSNQGEIAGGALERWPQRAF 506
>12_02_0584 +
20819822-20820970,20821394-20821618,20821776-20821907,
20822511-20822534
Length = 509
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 209 GAGVDCYRFLDDETILDHLTDVLSGVGVCDLI 114
GAG D YR L D + + D GV +C+L+
Sbjct: 209 GAGADAYRSLADLLLSNVCLDDGDGVRLCNLL 240
>05_07_0333 -
29351372-29351665,29351786-29351928,29352374-29352434,
29352950-29353034,29353254-29353292,29353487-29353557,
29353640-29353735,29353869-29354017,29354106-29354175,
29354752-29354792,29354902-29354977
Length = 374
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 85 RRCGWIQMKSMRSQTPTP 138
RR GW M +MR Q P P
Sbjct: 235 RRSGWSDMDAMRRQVPPP 252
>02_05_1288 + 35466544-35466579,35466691-35467590,35467695-35468231
Length = 490
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +3
Query: 15 TAVRMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVA 194
TAV + + L R K+ + P+ + ++ +RK I +GLV+ P
Sbjct: 428 TAVNLEEISLYNRKVEDCCEELDPKIKIAPSRYPQ--TIEEQELLRKQITEGLVMALPHV 485
Query: 195 VHSRA 209
+H R+
Sbjct: 486 IHFRS 490
>06_01_0027 - 271199-271424,271628-272095,272721-273018,273133-273343,
273427-274124,274921-274969,276059-276112,276244-276275,
276319-276484,276563-276628,276717-276812,276868-276957,
277302-277398,277496-277575,277709-277753,278006-278134,
278593-278722,278888-279222,279918-280053,280149-280328,
280422-280679,280752-281137
Length = 1409
Score = 26.2 bits (55), Expect = 9.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 158 DQGWSRHQETCSSPLP 205
D W + ETC SPLP
Sbjct: 1176 DSAWYKKMETCISPLP 1191
>01_06_0235 - 27747908-27749023
Length = 371
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 197 PLPRPCPQKHRGTXKGS 247
P PRP P+K R T KGS
Sbjct: 173 PRPRPRPKKKRRTEKGS 189
>01_05_0450 + 22357006-22357323,22357365-22357713,22358175-22358416
Length = 302
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 168 GLVIKKPVAVHSRARVRKNTEARXKGRHCGFGKRRGTA 281
G+ +K+ H + + +GRH G+G+RR +A
Sbjct: 212 GITLKEDEKQHGTSSSAADGGGLRRGRHDGWGRRRSSA 249
>01_01_0106 + 788967-789555,790139-790162,790339-791411
Length = 561
Score = 26.2 bits (55), Expect = 9.7
Identities = 16/60 (26%), Positives = 23/60 (38%)
Frame = +3
Query: 102 PNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARXKGRHCGFGKRRGTA 281
PNE + +N ++ K+I G + H G HCGF +RG A
Sbjct: 135 PNENQYLDISNLKEKANKVINFG---ETAFTWHLNKITNACQGCEWNGHHCGFSSQRGQA 191
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,764,341
Number of Sequences: 37544
Number of extensions: 246503
Number of successful extensions: 674
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 694697784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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