Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_H10
(650 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450 ... 28 0.058
AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450 ... 28 0.058
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 27 0.10
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 27 0.10
AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve co... 23 2.2
AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory recept... 23 2.9
AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory recept... 23 2.9
DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory pro... 22 5.0
DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory pro... 22 5.0
AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein. 22 5.0
>AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 491
Score = 28.3 bits (60), Expect = 0.058
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +1
Query: 88 LLIPSFYFK-LDQFIDVFQYSTKRV*EEI 171
+L P+F+F L +FI +F TKR+ E++
Sbjct: 129 ILTPAFHFNILQEFIQIFNEETKRLVEDL 157
>AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q4 protein.
Length = 491
Score = 28.3 bits (60), Expect = 0.058
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +1
Query: 88 LLIPSFYFK-LDQFIDVFQYSTKRV*EEI 171
+L P+F+F L +FI +F TKR+ E++
Sbjct: 129 ILTPAFHFNILQEFIQIFNEETKRLVEDL 157
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 27.5 bits (58), Expect = 0.10
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +2
Query: 155 EFEKKSEVLPFTKYGLSSIEE---FSRAEEEVRHLXLLKKAGLTTDEIKLYQENECGKLN 325
+FE+K +T+Y +E+ F+R R + + LT +IK++ +N K
Sbjct: 239 QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 298
Query: 326 QQNKVE 343
++NK +
Sbjct: 299 KENKTK 304
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 27.5 bits (58), Expect = 0.10
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +2
Query: 155 EFEKKSEVLPFTKYGLSSIEE---FSRAEEEVRHLXLLKKAGLTTDEIKLYQENECGKLN 325
+FE+K +T+Y +E+ F+R R + + LT +IK++ +N K
Sbjct: 241 QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 300
Query: 326 QQNKVE 343
++NK +
Sbjct: 301 KENKTK 306
>AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve cord
defective protein protein.
Length = 168
Score = 23.0 bits (47), Expect = 2.2
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 359 QKLHYIYTRIQNLKEQVKQQNNQPSTSKTDVSIKNLERN 475
Q Y R Q+ K QQNN P S V++ L R+
Sbjct: 89 QNHRYKTKRAQHEKGMHDQQNNNPLPSPRRVAVPVLVRD 127
>AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory receptor
candidate 34 protein.
Length = 324
Score = 22.6 bits (46), Expect = 2.9
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -3
Query: 534 FSKVFISFIGCPSQYVFLGMFLSKFFIDTSVLDVE 430
F VF I S Y F + L K ++ ++D+E
Sbjct: 101 FVNVFFWVIILMSNYAFTRIILLKSVLEIVIIDIE 135
>AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory receptor
candidate 13 protein.
Length = 390
Score = 22.6 bits (46), Expect = 2.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 576 AKEENYYXVXNVKKKEFYLXITQL 647
+ EEN + N+KK +F L + QL
Sbjct: 67 SSEENCVSMSNLKKLKFLLKLGQL 90
>DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory
protein 17 protein.
Length = 124
Score = 21.8 bits (44), Expect = 5.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 302 ENECGKLNQQNKVETGVLKQKLHYI 376
+NEC K N+++K GV K H I
Sbjct: 68 QNECAKCNEKHK--EGVRKVIRHLI 90
>DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory
protein 14 protein.
Length = 126
Score = 21.8 bits (44), Expect = 5.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 302 ENECGKLNQQNKVETGVLKQKLHYI 376
+NEC K N+++K GV K H I
Sbjct: 69 QNECAKCNEKHK--EGVRKVLHHLI 91
>AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein.
Length = 517
Score = 21.8 bits (44), Expect = 5.0
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 185 FTKYGLSSIEEFSRAEEEVRHLXLLKK 265
F + + ++EF + EEV ++ LKK
Sbjct: 248 FERLSILPVDEFLQISEEVANIWGLKK 274
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,943
Number of Sequences: 336
Number of extensions: 2244
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -