Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_H10
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    27   0.39 
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    27   0.68 
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    26   0.90 
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      26   1.2  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   2.1  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   2.7  

>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 27.5 bits (58), Expect = 0.39
 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = +2

Query: 155 EFEKKSEVLPFTKYGLSSIEE---FSRAEEEVRHLXLLKKAGLTTDEIKLYQENECGKLN 325
           +FE+K     +T+Y    +E+   F+R     R + +     LT  +IK++ +N   K  
Sbjct: 241 QFERKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 300

Query: 326 QQNKVE 343
           ++NK +
Sbjct: 301 KENKTK 306


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 26.6 bits (56), Expect = 0.68
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +2

Query: 365 LHYIYTRIQNLKEQVKQQNNQPSTSKTDVSIKNLE 469
           LHY+Y R++++ E+     + P      + I  +E
Sbjct: 405 LHYLYNRLRDISEETSALPSHPRRRSNSLPIPQIE 439


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 26.2 bits (55), Expect = 0.90
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = +2

Query: 302 ENECGKLNQQNKVETGV-LKQKLHYIYTRIQNLKEQVKQQNNQPSTSKTDVSIKNLE 469
           +NE  ++ QQ    T + +  +L  +  + Q  ++Q  Q   QP  S + VS++N+E
Sbjct: 94  DNEKLRVEQQETHTTLIAISAQLRDLQQKNQMKRQQQHQPPQQPGPSTSAVSLRNVE 150


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
 Frame = +2

Query: 257 LKKAGLTTDEIKLYQENECGKLN---QQNKVETGVLKQKLHYIYTRIQNLKEQVKQQNNQ 427
           +K  G  T  + +   +E G L+   Q+  +   +LK   H + + + +L  ++     +
Sbjct: 321 IKGTGSWTQMLLITDYHELGSLHDYLQKRVLNPHMLKTLAHSLASGVAHLHTEIFGTPGK 380

Query: 428 PSTSKTDVSIKNL 466
           PS +  D+  KN+
Sbjct: 381 PSIAHRDIKSKNI 393


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 13/56 (23%), Positives = 24/56 (42%)
 Frame = +2

Query: 365  LHYIYTRIQNLKEQVKQQNNQPSTSKTDVSIKNLERNIPKNTYCDGHPMNDIKTLE 532
            L   Y ++     QV +  +  +    ++   ++ER I +  +   HP ND K  E
Sbjct: 1689 LKVTYQQLSGQPVQVLEYESPDTVRVREILYDDIERPILQTKWTKVHPENDAKMFE 1744


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +2

Query: 212 EEFSRAEEEVRHLXLLKKAGLTTDEIKLYQEN--ECGKLNQQNKVETGVLKQKLHYIYTR 385
           E + + E E      LK+     D IK  +    E  ++  +   + G  K+++H + + 
Sbjct: 429 ENYKKIESEKNEA--LKRQEKLIDHIKTSRLGLEEQKRIKAELSQDVGTSKERIHELQSE 486

Query: 386 IQNLKEQV 409
           + N++EQ+
Sbjct: 487 LDNVREQL 494


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,065
Number of Sequences: 2352
Number of extensions: 8316
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)