Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_H10
(650 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL137840-1|CAH71622.1| 156|Homo sapiens novel SPANX protein pro... 31 2.7
U73522-1|AAD05037.1| 424|Homo sapiens AMSH protein. 30 6.2
BC101469-1|AAI01470.1| 424|Homo sapiens STAM binding protein pr... 30 6.2
BC101467-1|AAI01468.1| 424|Homo sapiens STAM binding protein pr... 30 6.2
BC065574-1|AAH65574.1| 424|Homo sapiens STAM binding protein pr... 30 6.2
BC007682-1|AAH07682.1| 424|Homo sapiens STAM binding protein pr... 30 6.2
AC073046-1|AAX88908.1| 424|Homo sapiens unknown protein. 30 6.2
>AL137840-1|CAH71622.1| 156|Homo sapiens novel SPANX protein
protein.
Length = 156
Score = 31.5 bits (68), Expect = 2.7
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +2
Query: 326 QQNKVETGVLKQKLHYIYTRIQNLKEQVKQQNNQPSTSKTDVSIKNLERNIPKNTYCDGH 505
+Q+ ET K Y R + + +NNQP+ S TD + + +I + DG
Sbjct: 37 EQSLKETEKAKYPTLVFYCRKNKKRNSNQLENNQPTESSTDPIKEKGDLDISAGSPQDGE 96
Query: 506 PMNDIKTL--ENCLFAHLKDDIL 568
D+ L CL H++ +L
Sbjct: 97 EEKDLVFLGARACLEEHIRRSVL 119
>U73522-1|AAD05037.1| 424|Homo sapiens AMSH protein.
Length = 424
Score = 30.3 bits (65), Expect = 6.2
Identities = 24/102 (23%), Positives = 46/102 (45%)
Frame = +2
Query: 101 AFILN*INL*MCSNTLPKEFEKKSEVLPFTKYGLSSIEEFSRAEEEVRHLXLLKKAGLTT 280
AFIL + + LPK + KS V+P K + ++E + + E LLK+
Sbjct: 59 AFILYNKYITLFIEKLPKHRDYKSAVIPEKKDTVKKLKEIAFPKAEELKAELLKRYTKEY 118
Query: 281 DEIKLYQENECGKLNQQNKVETGVLKQKLHYIYTRIQNLKEQ 406
E ++ E +L + ++ + K+K + Q L+++
Sbjct: 119 TEYNEEKKKEAEELARNMAIQQELEKEKQRVAQQKQQQLEQE 160
>BC101469-1|AAI01470.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 30.3 bits (65), Expect = 6.2
Identities = 24/102 (23%), Positives = 46/102 (45%)
Frame = +2
Query: 101 AFILN*INL*MCSNTLPKEFEKKSEVLPFTKYGLSSIEEFSRAEEEVRHLXLLKKAGLTT 280
AFIL + + LPK + KS V+P K + ++E + + E LLK+
Sbjct: 59 AFILYNKYITLFIEKLPKHRDYKSAVIPEKKDTVKKLKEIAFPKAEELKAELLKRYTKEY 118
Query: 281 DEIKLYQENECGKLNQQNKVETGVLKQKLHYIYTRIQNLKEQ 406
E ++ E +L + ++ + K+K + Q L+++
Sbjct: 119 TEYNEEKKKEAEELARNMAIQQELEKEKQRVAQQKQQQLEQE 160
>BC101467-1|AAI01468.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 30.3 bits (65), Expect = 6.2
Identities = 24/102 (23%), Positives = 46/102 (45%)
Frame = +2
Query: 101 AFILN*INL*MCSNTLPKEFEKKSEVLPFTKYGLSSIEEFSRAEEEVRHLXLLKKAGLTT 280
AFIL + + LPK + KS V+P K + ++E + + E LLK+
Sbjct: 59 AFILYNKYITLFIEKLPKHRDYKSAVIPEKKDTVKKLKEIAFPKAEELKAELLKRYTKEY 118
Query: 281 DEIKLYQENECGKLNQQNKVETGVLKQKLHYIYTRIQNLKEQ 406
E ++ E +L + ++ + K+K + Q L+++
Sbjct: 119 TEYNEEKKKEAEELARNMAIQQELEKEKQRVAQQKQQQLEQE 160
>BC065574-1|AAH65574.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 30.3 bits (65), Expect = 6.2
Identities = 24/102 (23%), Positives = 46/102 (45%)
Frame = +2
Query: 101 AFILN*INL*MCSNTLPKEFEKKSEVLPFTKYGLSSIEEFSRAEEEVRHLXLLKKAGLTT 280
AFIL + + LPK + KS V+P K + ++E + + E LLK+
Sbjct: 59 AFILYNKYITLFIEKLPKHRDYKSAVIPEKKDTVKKLKEIAFPKAEELKAELLKRYTKEY 118
Query: 281 DEIKLYQENECGKLNQQNKVETGVLKQKLHYIYTRIQNLKEQ 406
E ++ E +L + ++ + K+K + Q L+++
Sbjct: 119 TEYNEEKKKEAEELARNMAIQQELEKEKQRVAQQKQQQLEQE 160
>BC007682-1|AAH07682.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 30.3 bits (65), Expect = 6.2
Identities = 24/102 (23%), Positives = 46/102 (45%)
Frame = +2
Query: 101 AFILN*INL*MCSNTLPKEFEKKSEVLPFTKYGLSSIEEFSRAEEEVRHLXLLKKAGLTT 280
AFIL + + LPK + KS V+P K + ++E + + E LLK+
Sbjct: 59 AFILYNKYITLFIEKLPKHRDYKSAVIPEKKDTVKKLKEIAFPKAEELKAELLKRYTKEY 118
Query: 281 DEIKLYQENECGKLNQQNKVETGVLKQKLHYIYTRIQNLKEQ 406
E ++ E +L + ++ + K+K + Q L+++
Sbjct: 119 TEYNEEKKKEAEELARNMAIQQELEKEKQRVAQQKQQQLEQE 160
>AC073046-1|AAX88908.1| 424|Homo sapiens unknown protein.
Length = 424
Score = 30.3 bits (65), Expect = 6.2
Identities = 24/102 (23%), Positives = 46/102 (45%)
Frame = +2
Query: 101 AFILN*INL*MCSNTLPKEFEKKSEVLPFTKYGLSSIEEFSRAEEEVRHLXLLKKAGLTT 280
AFIL + + LPK + KS V+P K + ++E + + E LLK+
Sbjct: 59 AFILYNKYITLFIEKLPKHRDYKSAVIPEKKDTVKKLKEIAFPKAEELKAELLKRYTKEY 118
Query: 281 DEIKLYQENECGKLNQQNKVETGVLKQKLHYIYTRIQNLKEQ 406
E ++ E +L + ++ + K+K + Q L+++
Sbjct: 119 TEYNEEKKKEAEELARNMAIQQELEKEKQRVAQQKQQQLEQE 160
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,685,920
Number of Sequences: 237096
Number of extensions: 1137403
Number of successful extensions: 2793
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2793
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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