Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_H10
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-4|CAA99794.2| 357|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z46937-7|CAH10806.1| 109|Caenorhabditis elegans Hypothetical pr... 33 0.18
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 31 0.54
AL034488-2|CAA22448.1| 210|Caenorhabditis elegans Hypothetical ... 29 2.2
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 29 2.2
Z83114-5|CAB05550.2| 485|Caenorhabditis elegans Hypothetical pr... 28 5.0
U97592-5|AAB52873.1| 597|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF348167-1|AAK37545.1| 485|Caenorhabditis elegans Pelle IRAK-li... 28 5.0
Z77134-2|CAB00873.1| 877|Caenorhabditis elegans Hypothetical pr... 28 6.6
U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription f... 28 6.6
U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein ( Caeno... 28 6.6
Z72507-13|CAH60789.1| 515|Caenorhabditis elegans Hypothetical p... 27 8.7
Z72507-10|CAA96629.1| 531|Caenorhabditis elegans Hypothetical p... 27 8.7
U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like pr... 27 8.7
>Z75530-4|CAA99794.2| 357|Caenorhabditis elegans Hypothetical
protein C47E8.6 protein.
Length = 357
Score = 35.5 bits (78), Expect = 0.033
Identities = 19/88 (21%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +2
Query: 143 TLPKEFEK-KSEVLPFTKYGLSSIEEFSRAEEEVRHLXLLKKAGLTTDEIKLYQENECGK 319
T E EK K E KY + +E+ + E+E + + ++ + +EI L +
Sbjct: 209 TFIAELEKEKLEAQSDLKYAIVHLEQRMKEEQETQMQAMKEEREIEIEEIGLKHMEQIRT 268
Query: 320 LNQQNKVETGVLKQKLHYIYTRIQNLKE 403
+ N +T +++ K+ ++ + + NL++
Sbjct: 269 IESGNSEQTAMMQGKIDFLQSEVSNLRD 296
>Z46937-7|CAH10806.1| 109|Caenorhabditis elegans Hypothetical
protein F43C1.7 protein.
Length = 109
Score = 33.1 bits (72), Expect = 0.18
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +2
Query: 245 HLXLLKKAGLTTDEIKLYQENECGKLNQQNKVETGVLKQKLHYIYTRIQNLKEQVKQQNN 424
H+ L +G+T D I EC +L ++N ++ GV +K+ YT +NLK+ Q
Sbjct: 48 HVYLQLPSGITIDTIPEELLEECCQLVKKNSIQ-GVKMEKVEVNYTLKENLKKVKGMQTG 106
Query: 425 QPS 433
+ S
Sbjct: 107 EVS 109
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 31.5 bits (68), Expect = 0.54
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +2
Query: 140 NTLPKEFEKKSEVLPFTKYGLSSIEEFSRAEEEVRHLXLLKKAGLTTDEIKLYQENE 310
N LP+ +E++ F + G + I+ F+ A + L LLKK+GL +I L++ NE
Sbjct: 263 NALPQGAHPLAELVAFAEAGRAPID-FTVAPVDAVRL-LLKKSGLQVSDIALWELNE 317
>AL034488-2|CAA22448.1| 210|Caenorhabditis elegans Hypothetical
protein Y54G11A.2 protein.
Length = 210
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = +2
Query: 191 KYGLSSIEEFSRAEEEVRHLXLLKKAGLTTDEIKLYQENECGKLNQQNKVETGVLKQKLH 370
KYG F + H+ L +G+T D I +C +L +QN +E G +
Sbjct: 30 KYGWPEDVWFHVDKLSSAHVYLRLHSGMTIDSIPEALLIDCCQLVKQNSIE-GCKLNNVA 88
Query: 371 YIYTRIQNLKE 403
+YT NLK+
Sbjct: 89 IVYTMWSNLKK 99
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +2
Query: 149 PKEFEKKSEVLPFTKYGLSSIEEFSRAEEEVR-HLXLLKKA-GLTTDEIKLYQENECGKL 322
P F+ + L F + +++ + A+E+V HL LL G ++ ++ CGKL
Sbjct: 877 PARFDSATAALDFES--IIDLKDLASADEKVLYHLGLLADLFGWYPQSLECFEI--CGKL 932
Query: 323 NQQNKVETGVLKQKLHYIYTRIQNLKE 403
N +++E +K + Y + +K+
Sbjct: 933 NVTSEIELAKIKSSILYPDEHLNKIKK 959
>Z83114-5|CAB05550.2| 485|Caenorhabditis elegans Hypothetical
protein K09B11.1 protein.
Length = 485
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 293 LYQENECGKLNQQNKVETGVLKQKLHYIYTRIQNLKEQVKQQNNQPSTSKTDVSIKNLE 469
LYQ KL + ++ + +K HY+ ++ N +V +Q QP S++ +K E
Sbjct: 80 LYQLFAKTKLIRLMRMMRSQVHEKYHYLENKVTNSTSRVSKQMVQPPGSQSASRLKKTE 138
>U97592-5|AAB52873.1| 597|Caenorhabditis elegans Hypothetical
protein C14A11.6 protein.
Length = 597
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = +2
Query: 152 KEFEKKSEVLPFTKYGLSSIEEFSRAEEEVRHLXLLKKAGLTTDEIKLYQENECGKL-NQ 328
KE ++ S + F + + E + ++ H ++AGL + K + ++ KL N+
Sbjct: 174 KESQEDSPTMQFLAETTNVVVEKALSKSTGLH-DASEEAGLRRTKKKKKKSSK--KLPNR 230
Query: 329 QNKVETGVLKQKLHYIYTRIQNLKEQVKQQNNQPSTSKTDV 451
++ E+ ++ HYIY +NLK +++ ST + +
Sbjct: 231 KDLEESEDIESSTHYIYPESRNLKSNLQKLTTDISTEEKQI 271
>AF348167-1|AAK37545.1| 485|Caenorhabditis elegans Pelle IRAK-like
kinase 1 protein.
Length = 485
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 293 LYQENECGKLNQQNKVETGVLKQKLHYIYTRIQNLKEQVKQQNNQPSTSKTDVSIKNLE 469
LYQ KL + ++ + +K HY+ ++ N +V +Q QP S++ +K E
Sbjct: 80 LYQLFAKTKLIRLMRMMRSQVHEKYHYLENKVTNSTSRVSKQMVQPPGSQSASRLKKTE 138
>Z77134-2|CAB00873.1| 877|Caenorhabditis elegans Hypothetical
protein R09H10.4 protein.
Length = 877
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +2
Query: 374 IYTRIQNLKEQVKQQNNQPSTSKTDVSIKNLERNIPKNTYCD 499
+YT I ++ E ++ + N + +S KN + + ++YCD
Sbjct: 416 MYTAILSICENLEMRKNATKRKDSGLSFKNEQFTVMLDSYCD 457
>U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription
factor E12/47 homolog protein.
Length = 399
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Frame = +2
Query: 308 ECGKLNQQNKVETGVLKQKLHYIYTRIQ---NLKEQVKQQNNQPST------SKTDVSIK 460
E G++ Q+ T + KL +Y + L+EQV+Q+N P D +K
Sbjct: 324 ELGRMCTQHNQNTERNQTKLGILYNAVSVITQLEEQVRQRNMNPKVMAGMKRKPDDDKMK 383
Query: 461 NLERNIPKNTYCDGHP 508
L+ N P + GHP
Sbjct: 384 MLDDNAPSAQF--GHP 397
>U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein (
Caenorhabditis elegansN2 basic-helix-loop-helix
transcription factor E12/47homolog mRNA, complete cds.
).
Length = 399
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Frame = +2
Query: 308 ECGKLNQQNKVETGVLKQKLHYIYTRIQ---NLKEQVKQQNNQPST------SKTDVSIK 460
E G++ Q+ T + KL +Y + L+EQV+Q+N P D +K
Sbjct: 324 ELGRMCTQHNQNTERNQTKLGILYNAVSVITQLEEQVRQRNMNPKVMAGMKRKPDDDKMK 383
Query: 461 NLERNIPKNTYCDGHP 508
L+ N P + GHP
Sbjct: 384 MLDDNAPSAQF--GHP 397
>Z72507-13|CAH60789.1| 515|Caenorhabditis elegans Hypothetical
protein F17C11.7b protein.
Length = 515
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 380 CKYNAIFALTHPSQLYFADLIYH 312
CK N I L HPS+LY + +YH
Sbjct: 169 CKENGISTLLHPSKLY--NSVYH 189
>Z72507-10|CAA96629.1| 531|Caenorhabditis elegans Hypothetical
protein F17C11.7a protein.
Length = 531
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 380 CKYNAIFALTHPSQLYFADLIYH 312
CK N I L HPS+LY + +YH
Sbjct: 185 CKENGISTLLHPSKLY--NSVYH 205
>U41528-3|AAK39170.2| 594|Caenorhabditis elegans Kinesin-like
protein protein 8 protein.
Length = 594
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 383 RIQNLKEQVKQQNNQPSTSKTDVSIKNL--ERNIPKNTYCDGH 505
R+Q L+ Q+K NN S SK +++ K L ER K Y D H
Sbjct: 142 RLQQLESQLK--NNSASDSKMELANKQLEAEREQFKKLYEDAH 182
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,364,975
Number of Sequences: 27780
Number of extensions: 205419
Number of successful extensions: 591
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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