Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_H06
         (355 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071725-1|AAL49347.1|   92|Drosophila melanogaster RH41593p pro...   150   4e-37
AY071189-1|AAL48811.1|   92|Drosophila melanogaster RE23595p pro...   150   4e-37
AE014134-878|AAN10530.1|   92|Drosophila melanogaster CG5827-PB,...   150   4e-37
AE014134-877|AAF52217.1|   92|Drosophila melanogaster CG5827-PA,...   150   4e-37
AE013599-1898|AAF58242.1| 1290|Drosophila melanogaster CG17390-P...    31   0.56 
AE014296-3238|AAF49100.3| 1736|Drosophila melanogaster CG8334-PA...    30   0.97 

>AY071725-1|AAL49347.1|   92|Drosophila melanogaster RH41593p
           protein.
          Length = 92

 Score =  150 bits (364), Expect = 4e-37
 Identities = 68/90 (75%), Positives = 73/90 (81%)
 Frame = +3

Query: 12  MAKRXKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 191
           MAKR KKVGI GKYGTRYGASLRKMVKKME+TQH+KYTCSFCGKD+MKR+ VGIWSCKRC
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRC 60

Query: 192 KRTVXXGAWVFXXXXXXXXXXXVRRLREVK 281
           KRTV  GAWV+           VRRLRE K
Sbjct: 61  KRTVAGGAWVYSTTAAASVRSAVRRLRETK 90


>AY071189-1|AAL48811.1|   92|Drosophila melanogaster RE23595p
           protein.
          Length = 92

 Score =  150 bits (364), Expect = 4e-37
 Identities = 68/90 (75%), Positives = 73/90 (81%)
 Frame = +3

Query: 12  MAKRXKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 191
           MAKR KKVGI GKYGTRYGASLRKMVKKME+TQH+KYTCSFCGKD+MKR+ VGIWSCKRC
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRC 60

Query: 192 KRTVXXGAWVFXXXXXXXXXXXVRRLREVK 281
           KRTV  GAWV+           VRRLRE K
Sbjct: 61  KRTVAGGAWVYSTTAAASVRSAVRRLRETK 90


>AE014134-878|AAN10530.1|   92|Drosophila melanogaster CG5827-PB,
           isoform B protein.
          Length = 92

 Score =  150 bits (364), Expect = 4e-37
 Identities = 68/90 (75%), Positives = 73/90 (81%)
 Frame = +3

Query: 12  MAKRXKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 191
           MAKR KKVGI GKYGTRYGASLRKMVKKME+TQH+KYTCSFCGKD+MKR+ VGIWSCKRC
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRC 60

Query: 192 KRTVXXGAWVFXXXXXXXXXXXVRRLREVK 281
           KRTV  GAWV+           VRRLRE K
Sbjct: 61  KRTVAGGAWVYSTTAAASVRSAVRRLRETK 90


>AE014134-877|AAF52217.1|   92|Drosophila melanogaster CG5827-PA,
           isoform A protein.
          Length = 92

 Score =  150 bits (364), Expect = 4e-37
 Identities = 68/90 (75%), Positives = 73/90 (81%)
 Frame = +3

Query: 12  MAKRXKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 191
           MAKR KKVGI GKYGTRYGASLRKMVKKME+TQH+KYTCSFCGKD+MKR+ VGIWSCKRC
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRC 60

Query: 192 KRTVXXGAWVFXXXXXXXXXXXVRRLREVK 281
           KRTV  GAWV+           VRRLRE K
Sbjct: 61  KRTVAGGAWVYSTTAAASVRSAVRRLRETK 90


>AE013599-1898|AAF58242.1| 1290|Drosophila melanogaster CG17390-PA
           protein.
          Length = 1290

 Score = 30.7 bits (66), Expect = 0.56
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 45  GKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGK 143
           G YG+ +G S   M+  M   +H  + C +C K
Sbjct: 219 GWYGSEFGLSAYGMLMAMSHAEHLPFKCEYCSK 251


>AE014296-3238|AAF49100.3| 1736|Drosophila melanogaster CG8334-PA
           protein.
          Length = 1736

 Score = 29.9 bits (64), Expect = 0.97
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 96  MEVTQHAKYTCSFCGKDAMKRSCV 167
           M+ TQH  +TC +C + A +R+ V
Sbjct: 353 MQYTQHTTHTCDYCKRTASQRTAV 376


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,036,506
Number of Sequences: 53049
Number of extensions: 223831
Number of successful extensions: 855
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 859222404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)