Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_H04
(593 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0934 - 12513810-12513834,12513918-12513970,12514212-125145... 220 6e-58
03_05_0125 - 21039767-21039791,21039876-21039922,21040220-210405... 219 1e-57
12_02_1042 + 25638585-25638711,25639585-25639745,25639873-256400... 31 0.69
02_04_0038 - 19110520-19110574,19110684-19110811,19110912-191110... 31 0.69
03_06_0658 - 35335639-35335731,35335814-35335871,35336213-353363... 29 2.1
07_03_1639 + 28305801-28305958,28306240-28306249 29 3.7
04_03_0227 + 12979635-12980363,12980439-12980474,12980604-129808... 29 3.7
03_02_0596 + 9714022-9714065,9714799-9714868,9714978-9715883,971... 29 3.7
04_03_0266 + 13648287-13649099,13649186-13649524 28 4.9
10_06_0028 - 9802362-9802475,9802919-9803090,9803167-9803208,980... 28 6.5
09_06_0281 + 22014394-22015534,22016041-22017056 28 6.5
02_03_0300 + 17454622-17455402,17455535-17456977,17457015-174573... 28 6.5
12_01_0476 + 3738526-3738567,3738695-3738739,3739240-3739601,373... 27 8.5
02_05_0067 + 25557975-25558553 27 8.5
>03_02_0934 -
12513810-12513834,12513918-12513970,12514212-12514525,
12514608-12514730,12515710-12515821
Length = 208
Score = 220 bits (538), Expect = 6e-58
Identities = 101/158 (63%), Positives = 120/158 (75%)
Frame = +1
Query: 37 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 216
M SLKLQKRLAASV++CGK KVWLDPNE+NEI+ NSRQNIRK++KDG +IKKP +HSR
Sbjct: 1 MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60
Query: 217 ARVRKNTEARXKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXYRTAKKIDRHLY 396
+R R+ EA+ KGRH G+GKRRGT AR+P K LW YR AKKID+H+Y
Sbjct: 61 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY 120
Query: 397 HSLYMKAKGNVFKNKRVLMEYIHRXKADKAXTXMLSDQ 510
H +YMK KGN+FKNKRVLME IH+ KA+KA LSDQ
Sbjct: 121 HDMYMKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 158
>03_05_0125 -
21039767-21039791,21039876-21039922,21040220-21040533,
21040613-21040735,21041599-21041710
Length = 206
Score = 219 bits (535), Expect = 1e-57
Identities = 100/158 (63%), Positives = 120/158 (75%)
Frame = +1
Query: 37 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 216
M SLKLQKRLA+SV++CGK KVWLDPNE+NEI+ NSRQNIRK++KDG +IKKP +HSR
Sbjct: 1 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60
Query: 217 ARVRKNTEARXKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXYRTAKKIDRHLY 396
+R R+ EA+ KGRH G+GKRRGT AR+P K LW YR AKKID+H+Y
Sbjct: 61 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY 120
Query: 397 HSLYMKAKGNVFKNKRVLMEYIHRXKADKAXTXMLSDQ 510
H +YMK KGN+FKNKRVLME IH+ KA+KA LSDQ
Sbjct: 121 HDMYMKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 158
>12_02_1042 +
25638585-25638711,25639585-25639745,25639873-25640064,
25640221-25640315,25640645-25640807,25640905-25641015,
25641611-25642741,25642813-25642965,25643060-25643159,
25643333-25643427,25643508-25643681,25643751-25643807,
25643887-25643958,25644151-25644249,25644320-25644451,
25644549-25644722,25644830-25644957,25645065-25645119
Length = 1072
Score = 31.1 bits (67), Expect = 0.69
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +1
Query: 52 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRAR 222
LQ+ L + K W D E+N + + R + KM+ D LV+ +A H
Sbjct: 748 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 805
Query: 223 VRKNTEARXKGRHCGFG 273
+ T KGR GFG
Sbjct: 806 DEETTSISRKGRAQGFG 822
>02_04_0038 -
19110520-19110574,19110684-19110811,19110912-19111085,
19111189-19111320,19111391-19111489,19111680-19111751,
19111831-19111887,19111957-19112130,19112211-19112305,
19112478-19112577,19112672-19112824,19112896-19114026,
19114621-19114731,19114829-19114991,19115364-19115458,
19115613-19115804,19115929-19116069
Length = 1023
Score = 31.1 bits (67), Expect = 0.69
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +1
Query: 52 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRAR 222
LQ+ L + K W D E+N + + R + KM+ D LV+ +A H
Sbjct: 699 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 756
Query: 223 VRKNTEARXKGRHCGFG 273
+ T KGR GFG
Sbjct: 757 DEETTSISRKGRAQGFG 773
>03_06_0658 -
35335639-35335731,35335814-35335871,35336213-35336355,
35336624-35336703,35336916-35337075,35337531-35337668,
35338487-35338567,35338640-35338693,35339192-35339297,
35339615-35339682,35340076-35340225,35340401-35340519,
35341151-35341362,35342118-35342205,35342365-35342479,
35343083-35343274,35343809-35344018
Length = 688
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -3
Query: 156 VLSGVGVCDLIDFIWIQPHLLFTTSHNRGCKPLLQLEGTHPDTV 25
VL G D D WI PH T +R C +L LEG DT+
Sbjct: 519 VLDQEGWFDTGDIGWIAPHC--PTGPSRKCGGMLVLEGRAKDTI 560
>07_03_1639 + 28305801-28305958,28306240-28306249
Length = 55
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 409 MKAKGNVFKNKRVLMEYIHRXKADKAXTXMLSDQ 510
MK KGN+ NKR + +A+KA LSDQ
Sbjct: 1 MKVKGNMLNNKRGPYGEYPQVQAEKARKRTLSDQ 34
>04_03_0227 +
12979635-12980363,12980439-12980474,12980604-12980873,
12980962-12981099,12981347-12981795,12981885-12982055,
12982136-12982370
Length = 675
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +1
Query: 25 HRVRMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKK 195
+RVR L K V R LDP +NE N R N+ IKD L ++
Sbjct: 530 YRVRAIDTNLLKLTWKHVHRKAPHVALLDPAVVNETTLKNDRANMMGYIKDCLFARQ 586
>03_02_0596 +
9714022-9714065,9714799-9714868,9714978-9715883,
9715973-9716146,9716260-9716373,9716975-9717033,
9717170-9717236,9717305-9717356,9718070-9718488,
9718786-9718847,9719305-9719374,9719730-9719831,
9719933-9720063,9720492-9720606,9720792-9720827
Length = 806
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 121 INEIANTNSRQNIRKMIKDGLVIK-KPVAVHSRARVRKNTEARXKGRHCGFGKRRGTAN 294
+ E N NS + + GL+ + KP+ V S RVR + K GK R TAN
Sbjct: 198 LGEANNDNSEKLEELFLDKGLLDELKPIRVESGKRVRASIRIIEKMMSSRVGKIRNTAN 256
>04_03_0266 + 13648287-13649099,13649186-13649524
Length = 383
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 91 KKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 237
K+K+ L +E ++ T R+ RK+ K + KK + H ++RK++
Sbjct: 320 KRKLVLSDDEGDDAEKTRDRETTRKLPKQA-IPKKKTSSHPMPKIRKSS 367
>10_06_0028 -
9802362-9802475,9802919-9803090,9803167-9803208,
9803344-9804011,9804098-9804418,9804495-9804833,
9804856-9805109,9805300-9805510
Length = 706
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 106 LDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVH 210
LDP +NE N R NI IKD L ++ +H
Sbjct: 628 LDPAVVNETTLKNDRANIVDYIKDCLFARQRQGLH 662
>09_06_0281 + 22014394-22015534,22016041-22017056
Length = 718
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 207 YCYRFLDDETILDHLTDVLSGVGVCDLID 121
Y YR DDE+++ H T +L+ + D++D
Sbjct: 657 YSYRSPDDESLVTHFTALLTQGNLGDILD 685
>02_03_0300 +
17454622-17455402,17455535-17456977,17457015-17457317,
17458429-17458519,17458623-17459757,17459998-17460077,
17460449-17460533,17460614-17460705,17461079-17461147,
17461227-17461263,17461351-17461433,17461695-17461840,
17461868-17462138,17462245-17462281,17462428-17462721
Length = 1648
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 91 KKKVWLDPN-EINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARXK 252
K KVW P E+ + +R + +K + +KP A R RVRK TEA K
Sbjct: 681 KPKVWSRPRKEVEPVGKPKARGHPKKQAEPD---EKPKA---RGRVRKTTEANGK 729
>12_01_0476 +
3738526-3738567,3738695-3738739,3739240-3739601,
3739691-3740057,3740490-3740555,3741630-3741743
Length = 331
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 61 RLAASVMRCGKKKVWLDPNEINEIA--NTNSRQNIRKMIKDGLV 186
R A RC + LDPNEI ++ SR+ + +++ G++
Sbjct: 236 RFALHCRRCERDATPLDPNEIKHVSPYGITSREQVLEVVARGIL 279
>02_05_0067 + 25557975-25558553
Length = 192
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 445 HACS*THYPSPSCRVSGIDACQSSW 371
H C H P CR + +DA Q+ W
Sbjct: 148 HGCDKEHAYQPPCRPNVVDASQAVW 172
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,412,079
Number of Sequences: 37544
Number of extensions: 336329
Number of successful extensions: 819
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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