Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_G24
         (527 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    23   4.8  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   4.8  
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         23   8.4  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   8.4  

>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +2

Query: 74  ALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXKTNE 202
           ++TG ++LK  KQ+L  +DG +    ++     D+  I +  E
Sbjct: 575 SVTGTKLLKKTKQQLEPLDGTLGWRRSHRPSLHDISIIDEEEE 617


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 355 ADGAAIMRYQVRNILRSGRHTLDFTQLVLS 266
           AD AA +RY   +  +  RH L + Q ++S
Sbjct: 483 ADTAAELRYAKEHADKENRHFLQYAQDLIS 512


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = -2

Query: 172 HKSSRISRVSPNFPINLYEALFHNFQDFVSGQSILQTI 59
           H  S + + +P F +N+Y+ L     D  +G   ++ +
Sbjct: 80  HLHSSVGKSAPQFLLNVYDQLQQEETDAPAGAGRIRKV 117


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +1

Query: 31  VLAPGDFPEESSEV 72
           VLAPG  PEES+ V
Sbjct: 683 VLAPGRTPEESAAV 696


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,967
Number of Sequences: 2352
Number of extensions: 12959
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)