Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_G22
         (653 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B50C6 Cluster: PREDICTED: similar to CG4170-PA;...    38   0.21 
UniRef50_Q7PUS5 Cluster: ENSANGP00000009724; n=1; Anopheles gamb...    36   0.64 
UniRef50_UPI000051ACE1 Cluster: PREDICTED: similar to vasa intro...    33   4.5  
UniRef50_Q4Q764 Cluster: ATP-dependent DEAD/H DNA helicase recQ ...    33   4.5  
UniRef50_Q5JVS0-2 Cluster: Isoform 2 of Q5JVS0 ; n=2; Catarrhini...    33   6.0  
UniRef50_Q5JVS0 Cluster: Intracellular hyaluronan-binding protei...    33   6.0  

>UniRef50_UPI00015B50C6 Cluster: PREDICTED: similar to CG4170-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           CG4170-PA - Nasonia vitripennis
          Length = 437

 Score = 37.9 bits (84), Expect = 0.21
 Identities = 15/41 (36%), Positives = 28/41 (68%)
 Frame = +3

Query: 150 MENSYGVGVVNRYALFLDDETDPLACVKSARAGEGAQKEDQ 272
           MEN+Y + V N+++L LD++ DPL  +K     + A+K+++
Sbjct: 1   MENTYSITVTNKFSLALDEDEDPLEILKLREQEKEAKKKEK 41


>UniRef50_Q7PUS5 Cluster: ENSANGP00000009724; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000009724 - Anopheles gambiae
           str. PEST
          Length = 445

 Score = 36.3 bits (80), Expect = 0.64
 Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
 Frame = +3

Query: 150 MEN-SYGVGVVNRYALFL--DDETDPL-ACVKSARAGEGAQKEDQR 275
           MEN SYG+ V NRY LF   DDE DP+ A +KS +  +  Q+  Q+
Sbjct: 1   MENTSYGINVANRYDLFCIDDDEGDPIEAILKSKQKQQKKQQAQQQ 46


>UniRef50_UPI000051ACE1 Cluster: PREDICTED: similar to vasa intronic
           gene CG4170-PA, isoform A; n=1; Apis mellifera|Rep:
           PREDICTED: similar to vasa intronic gene CG4170-PA,
           isoform A - Apis mellifera
          Length = 414

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = +3

Query: 150 MENSYGVGVVNRYALFLDDETDPLACVKSARAGEGAQKEDQRS 278
           MEN Y + V N+++L L D+ DP   ++     + A+K+++ S
Sbjct: 1   MENMYSIAVTNKFSLALGDDEDPHEKLREEELKKEARKKEKLS 43


>UniRef50_Q4Q764 Cluster: ATP-dependent DEAD/H DNA helicase recQ
            family-like protein; n=3; Leishmania|Rep: ATP-dependent
            DEAD/H DNA helicase recQ family-like protein - Leishmania
            major
          Length = 1003

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +2

Query: 335  PPGRALRKLKM*SLKTSKVENNR-RVRDLHARSIVMLSVRLRVVVKIGR 478
            PPGR L K+K  SL  + VE NR R+   +     +L +R R +++ G+
Sbjct: 910  PPGRGLGKMKAVSLVNAFVEENRLRIHSTYEALRALLGIRPRSLIQHGK 958


>UniRef50_Q5JVS0-2 Cluster: Isoform 2 of Q5JVS0 ; n=2;
           Catarrhini|Rep: Isoform 2 of Q5JVS0 - Homo sapiens
           (Human)
          Length = 308

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +3

Query: 150 MENSYGVGVVNRYALFLDDETDPLACVKSARAGEGAQKEDQR 275
           M+ S+G  V NR+   LDDE+DP   ++ A      Q + +R
Sbjct: 16  MQESFGCVVANRFHQLLDDESDPFDILREAERRRQQQLQRKR 57


>UniRef50_Q5JVS0 Cluster: Intracellular hyaluronan-binding protein
           4; n=14; Eutheria|Rep: Intracellular hyaluronan-binding
           protein 4 - Homo sapiens (Human)
          Length = 413

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +3

Query: 150 MENSYGVGVVNRYALFLDDETDPLACVKSARAGEGAQKEDQR 275
           M+ S+G  V NR+   LDDE+DP   ++ A      Q + +R
Sbjct: 16  MQESFGCVVANRFHQLLDDESDPFDILREAERRRQQQLQRKR 57


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 540,018,170
Number of Sequences: 1657284
Number of extensions: 8973690
Number of successful extensions: 16991
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16990
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)